KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:49 2014 Check: 00 .. Name: ENSP00000305161/1-755 Len: 1201 Check: 2787 Weight: 1.00 Name: ENSBTAP00000015969/1-732 Len: 1201 Check: 5351 Weight: 1.00 Name: ENSTTRP00000000716/1-755 Len: 1201 Check: 2259 Weight: 1.00 Name: bmy_12072T0/1-755 Len: 1201 Check: 2031 Weight: 1.00 Name: BACU012062/1-1201 Len: 1201 Check: 8291 Weight: 1.00 // 1 50 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 MTAKEESTSG FSPPLSSTSP GSTGAPVPGF STTSTLRPPL TGTHTAVMTT 51 100 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 HSPALTPRQC YNGATWNGEK CACTQGYFGY QCQSPLGYFF IETPTKINAT 101 150 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 VELRVKVTNR NFTKDLNNIS SHTYQNFVQL FKSQMDKSYR SKDFPQYRGV 151 200 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 IIRKLLNGSV MVEHEVVMEA DFTSEFQELF ANLTKIIKAK VMNETGKLLS 201 250 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 DCKACENISR LCYSEKDTFV NETVKLGFDL QEQCTRNAAK EFAQFYYVDD 251 300 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 LDGKLACVTK CTPGTKSQMN CHHGRCLNSD THWHWGESCE FSTSKSMVYG 301 350 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 IVGAMVVLLV VSVVVLAILL SQSQRKLHRQ ENNLSRDWQE EDVPGNFQNT 351 400 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ---------- bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ---------- BACU012062/1-1201 GVWEGQNLQG DTFGLENVYR HFQPSLQNVD PTTELHIQRP TVVTTAHVRE 401 450 ENSP00000305161/1-755 ---------- ---------- ---------- ---------- ------MVSH ENSBTAP00000015969/1-732 ---------- ---------- ---------- ---------- ------MVSQ ENSTTRP00000000716/1-755 ---------- ---------- ---------- ---------- ------MVSQ bmy_12072T0/1-755 ---------- ---------- ---------- ---------- ------MVSQ BACU012062/1-1201 RSVVRAQQQQ RQGLGGSPLR VLEPRLGRRE AALYLKRPEE NSWLFRMVSQ 451 500 ENSP00000305161/1-755 GSSPSLLEAL SSDFLACKIC LEQLRAPKTL PCLHTYCQDC LAQLADGGRV ENSBTAP00000015969/1-732 GSSPSLLEAL SSDFLACKIC LEQLRVPKTL PCLHTYCQDC LAQLAEGSRL ENSTTRP00000000716/1-755 GSSPSLLEAL SSDFLACKIC LEQLRVPKTL PCLHTYCQDC LAQLAEGSHL bmy_12072T0/1-755 GSSPSLLEAL SSDFLACKIC LEQLRVPKTL PCLHTYCQDC LGQLAEGSHL BACU012062/1-1201 GSSPSLLEAL SSDFLACKIC LEQLRVPKTL PCLHTYCQDC LGQLAEGSHV 501 550 ENSP00000305161/1-755 RCPECRETVP VPPEGVASFK TNFFVNGLLD LVKARACGDL RAGKPACALC ENSBTAP00000015969/1-732 RCPECRESVP VPPAGVAAFK TNFFVNGLLD LVKARAGGDL RAGKPACALC ENSTTRP00000000716/1-755 RCPECRETVP VPPTGVAAFK TNFFVNGLLD LVKARAGGDL RAGKPACALC bmy_12072T0/1-755 RCPECRESVP VPPTGVAAFK SNFFVNGLLD LVKARAGGDL RAGKPACALC BACU012062/1-1201 RCPECRESVP VPPTGVAAFK SNFFVNGLLD LVKARAGGDL RAGKPACALC 551 600 ENSP00000305161/1-755 PLVGGTSTGG PATARCLDCA DDLCQACADG HRCTRQTHTH RVVDLVGYRA ENSBTAP00000015969/1-732 PLMGGASAGG PATARCLDCA DDLCQACADG HRCTRQTHSH RVVDLVGYRA ENSTTRP00000000716/1-755 PLMGGASAGG PATARCLDCA DDLCQACADG HRCTRQTHSH RVVDLVGYRA bmy_12072T0/1-755 PLMGGASAGG PATARCLDCA DDLCQACADG HRCTRQTHSH RVVDLVGYRA BACU012062/1-1201 PLMGGASAGG PATARCLDCA DDLCQACADG HRCPLQTHSH RVVDLVGYRA 601 650 ENSP00000305161/1-755 GWYDEEARER QAAQCPQHPG EALRFLCQPC SQLLCRECRL DPHLDHPCLP ENSBTAP00000015969/1-732 GWYDEEARER QAAQCPQHPG EALRFLCQPC SQLLCRECRL DPHLDHPCLP ENSTTRP00000000716/1-755 GWYDEEARER QAAQCPQHPG ESLRFLCQPC SQLLCRECRL DPHLDHPCLP bmy_12072T0/1-755 GWYDEEARER QAAQCPQHPG EPLRFLCQPC SQLLCRECRL DPHLDHPCLP BACU012062/1-1201 GWYDEEARER QAAQCPQHPG EPLRFLCQPC SQLLCRECRL DPHLDHPCLP 651 700 ENSP00000305161/1-755 LAEAVRARRP GLEGLLAGVD NNLVELEAAR RVEKEALARL REQAARVGTQ ENSBTAP00000015969/1-732 LAEAVRARRP GLEELLAGVD NNLAELEATR LAEKEALARL REQAAKVVTQ ENSTTRP00000000716/1-755 LAEAVRARRP GLEELLAGVD SNLAELEATR LAEEEALACL REQAAKVGTQ bmy_12072T0/1-755 LAEAVRARRP GLEELLAGVD SNLAKLEATR LAEKEALACL REQAAKVGTQ BACU012062/1-1201 LAEAVRARRP GLEELLAGVD SNLAELEATR LEEKEALARL REQAAKVGTQ 701 750 ENSP00000305161/1-755 VEEAAEGVLR ALLAQKQEVL GQLRAHVEAA EEAARERLAE LEGREQVARA ENSBTAP00000015969/1-732 VEEASERVLR ALLAQKQEVL GQLRAHVEAA EEGARERLGE LEGQEQVARE ENSTTRP00000000716/1-755 VEEAAEGVLR ALLAQKQEVL GQLRAHVEAA EEAARERLGE LESRAQVARE bmy_12072T0/1-755 VEEAAEGVLR ALLAQKQEVL GQLRAHVEAA EEAARERLGE LESREQVARE BACU012062/1-1201 VEEAAEGVLR ALLAQKQEVL GQLRAHVEAA EEAARERLGE LESREQVARE 751 800 ENSP00000305161/1-755 AAAFARRVLS LGREAEILSL EGAIAQRLRQ LQGCPWAPGP APCLLPQLEL ENSBTAP00000015969/1-732 AAAFARRVLS LGREAEILSL EGAIAQRLRQ LQGCPWVPGP APCQLPQLEL ENSTTRP00000000716/1-755 AAAFARRVLS LGREAEILSL EGAIAQRLQQ LQRCPWMPGP APCLLPQLEL bmy_12072T0/1-755 AAAFARRVLS LGREAEILSL EGAIAQRLQQ LQRCPWMPGS APCLLPRLEL BACU012062/1-1201 AATFARRVLS LGREAEILSL EGAIAQRLQQ LQRCPWMPGS APCLLPRLEL 801 850 ENSP00000305161/1-755 HPGLLDKNCH LLRLSFEEQQ PQKDGGKDGA GTQGGEESQS RREDEPKTER ENSBTAP00000015969/1-732 YPGLLDKNCH LLRLSFEEQL PQKDSGKDGA RSQGGDATQP QSRDGVQTPN ENSTTRP00000000716/1-755 HPGLLDKNRQ LLRLSFQEQQ PQKDSGKDGA RSQGGAATPP QSRDGAQTPK bmy_12072T0/1-755 HPGLLDQKCH LLRLSFEEQQ PQKASGKDGA RSQGGDETQP QSRDGAPTPK BACU012062/1-1201 HPGLLDQQCH LLRLSFEEQQ PRKASGKDGA RSQGGDETQP QSRDGAPTPK 851 900 ENSP00000305161/1-755 QGGVQPQAGD GAQTPKEEKA QTTREEGAQT LEEDRAQTPH EDGGPQPHRG ENSBTAP00000015969/1-732 Q--------- ---------- ----EDGAKT PKEGRAQTPQ EDGGTQARVG ENSTTRP00000000716/1-755 QDSAQPPQED GAQTLKAERA ETPQEDGAQT PKEGRAQTPQ EDGGAQSPRG bmy_12072T0/1-755 QDGAQTPQED GAQTLKAERA ETPQEDGAKT PKEGRAQTPQ EDGGAQSPRG BACU012062/1-1201 QDGAQTPQED GAQTLKAERA ETPQEDGAKT PKEGRAQTPQ EDGGAQSPRG 901 950 ENSP00000305161/1-755 GRPNKKKKFK GRLKSISREP SPALGPNLDG SGLLPRPIFY CSFPTRMPGD ENSBTAP00000015969/1-732 SRSNKKRKFK GRLKSVSREP SPAPGPNLEG SGLLPRPIFF CSFPTRMPGD ENSTTRP00000000716/1-755 GRSNKKRKFK GRLKSVSREP SPAPGPNLEG SGLLPRPIFF CSFPTRMPGD bmy_12072T0/1-755 GRSNKKRKFK GRLKSISREP SPAPGPNLEG SGLLPRPIFF CSFPTRMPGD BACU012062/1-1201 GRSNKKRKFK GRLKSISREP SPAPGPNLEG SGLLPRPIFF CSFPTRMPGD 951 1000 ENSP00000305161/1-755 KRSPRITGLC PFGPREILVA DEQNRALKRF SLNGDYKGTV PVPEGCSPCS ENSBTAP00000015969/1-732 KRAPRITGLC PFGSREILVA DEQNRALKRF SLNGDYRGAV PVPEGCSPCS ENSTTRP00000000716/1-755 KRSPRITGLC PFGSREILVA DEQNRALKRF SLNGDYKGAV PVPEGCSPCS bmy_12072T0/1-755 KRSPRITGLC PFGSREILVA DEQNRALKRF SLNGDYKGAV PVPEGCSPCS BACU012062/1-1201 KRSPRITGLC PFGSREILVA DEQNRALKRF SLNGDYKGAV PVPEGCSPCS 1001 1050 ENSP00000305161/1-755 VAALQSAVAF SASARLYLIN PNGEVQWRRA LSLSQASHAV AALPSGDRVA ENSBTAP00000015969/1-732 VAALQDTVAF SAAARLYLIN HNGEVQWRRA LSLCQASHAV AAMPSGDRVA ENSTTRP00000000716/1-755 VAALQDAVAF SAGARLYLIR PNGEVQWRRA LSLCQASHAV AAMPSGDRVA bmy_12072T0/1-755 VAALQDAVAF SAGARLYLIR PNGEVQWRRA LSLCQASHAV AAMPSGDRVA BACU012062/1-1201 VAALQDAVAF SAGARLYLIR PDGEVQWRRA LSLSRASHAV AAMPSGDRVA 1051 1100 ENSP00000305161/1-755 VSVAGHVEVY NMEGSLATRF IPGGKASRGL RALVFLTTSP QGHFVGSDWQ ENSBTAP00000015969/1-732 VSVSGHVEVY NMEGSLATRF IPGGKANRGL RALVFLTTSP QGHFVGSDWQ ENSTTRP00000000716/1-755 VSVSGHVEVY NMEGSLATRF IPGGKASRGL RALVFLTTSP QGNFVGSDWQ bmy_12072T0/1-755 VSVSGHVEVY NMEGSLATRF IPGGKASRGL RALVFLTTSP QGNFVGSDWQ BACU012062/1-1201 VSVSGHVEVY NMEGSLATRF IPGGKASRGL RALVFLTTSP QGNFVGSDWQ 1101 1150 ENSP00000305161/1-755 QNSVVICDGL GQVVGEYKGP GLHGCQPGSV SVDKKGYIFL TLREVNKVVI ENSBTAP00000015969/1-732 QNSLVVCDGL GQVVGEYRGP GLHGCQPGSV SVDKKGYIFL TLREVNKVVI ENSTTRP00000000716/1-755 QSSLVVCDGL GQVIGEYRGP GLHGCQPGSV SVDKKGYIFL TLREVNKVVI bmy_12072T0/1-755 QNSLVVCDGL GQVVGEYRGP GLHGCQPGSV SVDKKGYIFL TLREVNKVVI BACU012062/1-1201 QNSLVVCDGL GQVIGEYRGP GLHGCQPGSV SVDKKGYIFL TLREVNKVVI 1151 1200 ENSP00000305161/1-755 LDPKGSLLGD FLTAYHGLEK PRVTTMVDGR YLVVSLSNGT IHIFRVRSPD ENSBTAP00000015969/1-732 LDPKGSLLGD FLTAYHGLEK PRVTTMVDGR YLVVSLSNGT IHVFRVRPLD ENSTTRP00000000716/1-755 LDPKGSLLGD FLTAYHGLEK PRVTTMVDGR YLVVSLSNGT IHVFRVRPPD bmy_12072T0/1-755 LDPKGSLLGD FLTAYHGLEK PRVTTMVDGR YLVVSLSNGT IHVFRVRPPD BACU012062/1-1201 LDPKGSLLGD FLTAYHGLEK PRVTTMVDGR YLVVSLSNGT IHVFRVRPPD 1201 1250 ENSP00000305161/1-755 S ENSBTAP00000015969/1-732 S ENSTTRP00000000716/1-755 S bmy_12072T0/1-755 S BACU012062/1-1201 S