KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:50 2014 Check: 00 .. Name: ENSBTAP00000015973/1-758 Len: 834 Check: 7141 Weight: 1.00 Name: bmy_00137T0/1-786 Len: 834 Check: 8706 Weight: 1.00 Name: ENSP00000378338/1-770 Len: 834 Check: 6143 Weight: 1.00 Name: ENSTTRP00000015480/1-697 Len: 834 Check: 338 Weight: 1.00 Name: BACU010485/1-782 Len: 834 Check: 692 Weight: 1.00 // 1 50 ENSBTAP00000015973/1-758 ---------- ---------- ---------- ---------- -MVVGGCHEK bmy_00137T0/1-786 AGLAEPSRGL AGAGPGCRGR RRPGPPPAPP TLAQRAAAAS PLRMSRKGPR ENSP00000378338/1-770 ---------- ---------- ---------- ---------- ---MSRKGPR ENSTTRP00000015480/1-697 ---------- ---------- ---------- ---------- ---------- BACU010485/1-782 ---------- ---------- ---------- ---------- ---MGPRSPR 51 100 ENSBTAP00000015973/1-758 ASYC------ ---------- ---PDPGWAS ISRGVLVCDE CCSVHRSLGR bmy_00137T0/1-786 AEVCADCSA- ---------- ---PDPGWAS ISRGVLVCDE CCSVHRSLGR ENSP00000378338/1-770 AEVCADCSA- ---------- ---PDPGWAS ISRGVLVCDE CCSVHRSLGR ENSTTRP00000015480/1-697 ---------- ---------- -----PGWAS ISRGVLVCDE CCSVHRSLGR BACU010485/1-782 TGSSVECSTG RQVVSSLPPP PPPRDPGWAS ISRGVLVCDE CCSVHRSLGR 101 150 ENSBTAP00000015973/1-758 HISIVKHLRH SAWPPTLLQM VHTLASNGAN SIWEHSLLDP AQVQSGRRKA bmy_00137T0/1-786 HISIVKHLRH SAWPPTLLQM VHTLASNGAN SIWEHSLLDP AQVQSGRRKA ENSP00000378338/1-770 HISIVKHLRH SAWPPTLLQM VHTLASNGAN SIWEHSLLDP AQVQSGRRKA ENSTTRP00000015480/1-697 HISIVKHLRH SA--PTLLQM VHTLASNGAN SIWEHSLLDP AQVQSGRRKA BACU010485/1-782 HISIVKHLRH SAWPPTLLQM VHTLASNGAN SIWEHSLLDP AQVQSGRRKA 151 200 ENSBTAP00000015973/1-758 NPQDKVHPIK SEFIRAKYQM LAFVHKLPCR DDDGVTAKDL SKQLHSSVRT bmy_00137T0/1-786 NPQDKVHPIK SEFIRAKYQM LAFVHKLPCR DDDGVTAKDL SKQLHSSVRT ENSP00000378338/1-770 NPQDKVHPIK SEFIRAKYQM LAFVHKLPCR DDDGVTAKDL SKQLHSSVRT ENSTTRP00000015480/1-697 NPQDKVHPIK SEFIRAKYQM LAFVHKLPCR DDDGVTAKDL SKQLHSSVRT BACU010485/1-782 NPQDKVHPIK SEFIRAKYQM LAFVHKLPCR DDDGVTAKDL SKQLHSSVRT 201 250 ENSBTAP00000015973/1-758 GNLETCLRLL SLGAQANFFH PEKGTTPLHV AAKAGQTLQA ELLVVYGADP bmy_00137T0/1-786 GNLETCLRLL SLGAQANFFH PEKGTTPLHV AAKAGQTLQA ELLVVYGADP ENSP00000378338/1-770 GNLETCLRLL SLGAQANFFH PEKGTTPLHV AAKAGQTLQA ELLVVYGADP ENSTTRP00000015480/1-697 GNLETCLRLL SLGAQANFFH PEKGTTPLHV AAKAGQTLQA ELLVVYGADP BACU010485/1-782 GNLETCLRLL SLGAQANFFH PEKGTTPLHV AAKAGQTLQA ELLVVYGADP 251 300 ENSBTAP00000015973/1-758 GSPDVNGRTP IDYARQAGHH ELAERLVECQ YELTDRLAFY LCGRKPDHKN bmy_00137T0/1-786 GSPDVNGRTP IDYARQAGHH ELAERLVECQ YELTDRLAFY LCGRKPDHRN ENSP00000378338/1-770 GSPDVNGRTP IDYARQAGHH ELAERLVECQ YELTDRLAFY LCGRKPDHKN ENSTTRP00000015480/1-697 GSPDVNGRTP IDYARQAGHH EQAESLF-SQ HDLSDRLVFT SCGC-PDHRN BACU010485/1-782 GSPDVNGRTP IDYARQAGHH ELAERLVECQ YELTDRLAFY LCGRKPDHRN 301 350 ENSBTAP00000015973/1-758 GHYIIPQMAD ---------S LDLSELAKAA KKKLQALSNR LFEELAMDVY bmy_00137T0/1-786 GHYIIPQMAD ---------S LDLSELAKAA KKKLQALSNR LFEELAMDVY ENSP00000378338/1-770 GHYIIPQMAD RSRQKCMSQS LDLSELAKAA KKKLQALSNR LFEELAMDVY ENSTTRP00000015480/1-697 GHYIIPQMAD RSRQKCMSQS LDLSELAKAA KKKLQALSNR LFEELAMDVY BACU010485/1-782 GHYIIPQMAD ---------S LDLSELAKAA KKKLQALSNR LFEELAMDVY 351 400 ENSBTAP00000015973/1-758 DEVDRRENDA VWLATQNHST LVTERSAVPF LPVNPEYSAT RN-------Q bmy_00137T0/1-786 DEVDRRENDA VWLATQNHST LVTERSAVPF LPVNPEYSAT RN-------Q ENSP00000378338/1-770 DEVDRRENDA VWLATQNHST LVTERSAVPF LPVNPEYSAT RN-------Q ENSTTRP00000015480/1-697 DEVDRRENDA VWLATQNHST LVTERSAVPF LPVNPEYSAT RN-------Q BACU010485/1-782 DEVDRRENDA VWLATQNHST LVTERSAVPF LPVNPEYSAT RNHPALSASQ 401 450 ENSBTAP00000015973/1-758 GRQKLARFNA REFATLIIDI LSEAKRRQQG KSLGSPTDNL ELSTRGQSDL bmy_00137T0/1-786 GRQKLARFNA REFATLIIDI LSEAKRRQQG KSLSSPTDNL ELSVRSQSDL ENSP00000378338/1-770 GRQKLARFNA REFATLIIDI LSEAKRRQQG KSLSSPTDNL ELSLRSQSDL ENSTTRP00000015480/1-697 GRQKLARFNA REFATLIIDI LSEAKRRQQG KSLSSPTDNL ELSMRSQSDL BACU010485/1-782 GRQKLARFNA REFATLIIDI LSEAKRRQQG KSLSSPTDNL ELSVRSQSDL 451 500 ENSBTAP00000015973/1-758 DDQHDYDSVA SDEDTDQEPL RSAGATRNNR ARSMDSSDLS DGAVTLQEYL bmy_00137T0/1-786 DDQHDYDSVA SDEDTDQEPL RSAGATRNNR ARSMDSSDLS DGAVTLQEYL ENSP00000378338/1-770 DDQHDYDSVA SDEDTDQEPL RSTGATRSNR ARSMDSSDLS DGAVTLQEYL ENSTTRP00000015480/1-697 DDQHDYDSVA SDEDTDQEPL RSAGATRNNR ARSMDSSDLS DGAVTLQEYL BACU010485/1-782 DDQHDYDSVA SDEDTDQEPL RSAGATRNNR ARSMDSSDLS DGAVTLQEYL 501 550 ENSBTAP00000015973/1-758 ELKKALAASE AKVQQLMKVN SSLSDELRRL QREIHKLQAE NLQIRQPPGP bmy_00137T0/1-786 ELKKALAASE AKVQQLMKVN SSLSDELRRL QREIHKLQAE NLQIRQPPGP ENSP00000378338/1-770 ELKKALATSE AKVQQLMKVN SSLSDELRRL QREIHKLQAE NLQLRQPPGP ENSTTRP00000015480/1-697 ELKKALAASE AKVQQLMKVN SSLSDELRRL QREIHKLQAE NLQIRQPPGP BACU010485/1-782 ELKKALAASE AKVQQLMKVN SSLSDELRRL QREIHKLQTE NLQIRQPPGP 551 600 ENSBTAP00000015973/1-758 MPTPPLPSER AEHAPVGPGG STHRRDRQAF SMYEPGSALK PFGVPPGDEL bmy_00137T0/1-786 VPTAPLPSER AEHAPIGPGG STHRRDRQAF SMYEPGSALK PFGGQPGDEL ENSP00000378338/1-770 VPTPPLPSER AEHTPMAPGG STHRRDRQAF SMYEPGSALK PFGGPPGDEL ENSTTRP00000015480/1-697 VPTAPLPSER AEHAPMGPGG STHRRDRQAF SMYEPGSALK PFGGPPGDEL BACU010485/1-782 VPTAPLPSER AEHAPMGPGG STHRRDRQAF SMYEPGSALK PFGGPPGDEL 601 650 ENSBTAP00000015973/1-758 TTRLQPFHST ELEDDAIYSV HVPAGLYRIR KGVSASAVPF TPSSPLLSCS bmy_00137T0/1-786 TTRLQPFHST ---------- --------VR KGVSASAVPF TPSSPLLSCS ENSP00000378338/1-770 TTRLQPFHST ELEDDAIYSV HVPAGLYRIR KGVSASAVPF TPSSPLLSCS ENSTTRP00000015480/1-697 TTRLQPFHST ELEDDAIYSV HVPAGLYRVR KGVSASAVPF TPSSPLLSCS BACU010485/1-782 TTRLQPFHST ELEDDAIYSV HVPAGLYRVR KGVSASAVPF TPSSPLLSCS 651 700 ENSBTAP00000015973/1-758 QEGSRHTSKL SRHGSGADSD YENTQSGDPL LGLEGKRFLE LGKEEDFHPE bmy_00137T0/1-786 QEGSRHTSKL SRHGSGADSD YENTQSGDPL LGLEGKRFLE LGKEEDFHPE ENSP00000378338/1-770 QEGSRHTSKL SRHGSGADSD YENTQSGDPL LGLEGKRFLE LGKEEDFHPE ENSTTRP00000015480/1-697 QEGSRHSSKL SRHGSGADSD YENTQSGDPL LGLEGKRFLE LGKEEDFHPE BACU010485/1-782 QEGSRHTSKL SRHGSGADSD YENTQSGDPL LGLEGKRFLE LGKEEDFHPE 701 750 ENSBTAP00000015973/1-758 LESLDGDLDP GLPSTEDVIL KTEQVTKNIQ ELLRAAQEFK HDSFVPCSEK bmy_00137T0/1-786 LESLDGDLDP GLPSTEDVIL KTEQVTKNIQ ELLRAAQEFK HDSFVPCSEK ENSP00000378338/1-770 LESLDGDLDP GLPSTEDVIL KTEQVTKNIQ ELLRAAQEFK HDSFVPCSEK ENSTTRP00000015480/1-697 LESLDGDLDP GLPSTEDVIL KTEQVTKNIQ ELLRAAQEFK HDSFVPCSEK BACU010485/1-782 LESLDGDLDP GLPSTEDVIL KTEQVTKNIQ ELLRAAQEFK HDSFVPCSEK 751 800 ENSBTAP00000015973/1-758 IHLAVTEMAS LFPKRPALEP VRSSLRLLNA SAYRLQSECR KTVPPEPGAP bmy_00137T0/1-786 IHLAVTEMAS LFPKRPALEP VRSSLRLLNA SAYRLQSECR KTVPPEPGAP ENSP00000378338/1-770 IHLAVTEMAS LFPKRPALEP VRSSLRLLNA SAYRLQSECR KTVPPEPGAP ENSTTRP00000015480/1-697 IHLAVTEMAS LFPKRPALEP VRSSLRLLNA SAY------- ---------- BACU010485/1-782 IHLAVTEMAS LFPKRPALEP VRSSLRLLNA SAYRLQSECR KTVPPEPGAP 801 850 ENSBTAP00000015973/1-758 VDFQLLTQQV IQCAYDIAKA AKQLVTITTR EKKQ bmy_00137T0/1-786 VDFQLLTQQV IQCAYDIAKA AKQLVTITTR EKKQ ENSP00000378338/1-770 VDFQLLTQQV IQCAYDIAKA AKQLVTITTR EKKQ ENSTTRP00000015480/1-697 ---------- ---------- ---------- ---- BACU010485/1-782 VDFQLLTQQV IQCAYDIAKA AKQLVTITTR EKKQ