KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:51 2014 Check: 00 .. Name: ENSTTRP00000015780/1-608 Len: 716 Check: 8657 Weight: 1.00 Name: bmy_13731T0/1-583 Len: 716 Check: 6645 Weight: 1.00 Name: ENSP00000325690/1-608 Len: 716 Check: 4121 Weight: 1.00 Name: BACU002487/1-576 Len: 716 Check: 121 Weight: 1.00 Name: ENSBTAP00000015985/1-534 Len: 716 Check: 3252 Weight: 1.00 // 1 50 ENSTTRP00000015780/1-608 KAGTAAAAAA GPGVGGAGSP AR-GTGPCGA VSVFPGARLL TIGDANGEIQ bmy_13731T0/1-583 ---------- ---------- ---------- ---------- ---SCGGRWP ENSP00000325690/1-608 --MAAAAAAV GPGAGGAGSA VPGGAGPCAT VSVFPGARLL TIGDANGEIQ BACU002487/1-576 ---------- ---------- ---------- ------MGQL RLPLALAALA ENSBTAP00000015985/1-534 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015780/1-608 RHAEQQALRL EVRAGPDAAG I--ALYSXXX XXXXXXXXXX XXXXXXXXXX bmy_13731T0/1-583 RDLAAHARLP PL-------- ------ADED VCVFKCSVSR ETECSRVGKQ ENSP00000325690/1-608 RHAEQQALRL EVRAGPDSAG I--ALYSHED VCVFKCSVSR ETECSRVGKQ BACU002487/1-576 RALALDAAKL PLASAQERRG VWHQQVLHED VCVFKCSVSR ETECSRVGKQ ENSBTAP00000015985/1-534 ---------- ---------- --------ED VCVFKCSVSR ETECSRVGKQ 101 150 ENSTTRP00000015780/1-608 XXXXXXXXXX XXXXXXXXXX FCSFYNILKT CRGHTLERSV FSERTEESSA bmy_13731T0/1-583 SFIITLGCNS VLIQFATPSD FCSFYNILKT CRGHTLERSV FSERTEESSA ENSP00000325690/1-608 SFIITLGCNS VLIQFATPND FCSFYNILKT CRGHTLERSV FSERTEESSA BACU002487/1-576 SFIITLGCNS VLIQFATPSD FCSFYNILKT CRGHTLERSV FSERTEESSA ENSBTAP00000015985/1-534 SFIITLGCNS VLLQFATPSD FCSFYNILKT CRGHTLERSV FSERTEESSA 151 200 ENSTTRP00000015780/1-608 VQYFQFYGYL SQQQNMMQDY VRTGTYQRAI LQNHTDFKDK IVLDVGCGSG bmy_13731T0/1-583 VQYFQFYGYL SQQQNMMQDY VRTGTYQRAI LQNHTDFKDK IVLDVGCGSG ENSP00000325690/1-608 VQYFQFYGYL SQQQNMMQDY VRTGTYQRAI LQNHTDFKDK IVLDVGCGSG BACU002487/1-576 VQYFQFYGYL SQQQNMMQDY VRTGTYQRAI LQNHTDFKDK IVLDVGCGSG ENSBTAP00000015985/1-534 VQYFQFYGYL SQQQNMMQDY VRTGTYQRAI LQNHTDFKDK IVLDVGCGSG 201 250 ENSTTRP00000015780/1-608 ILSFFAAQAG ARKIYAVEAS TMAQHAE-LV KSNNLTDRIV VIPGKVEEVS bmy_13731T0/1-583 ILSFFAAQAG ARKIYAVEAS TMAQHAEVLV KSNNLTDRIV VIPGKVEEVS ENSP00000325690/1-608 ILSFFAAQAG ARKIYAVEAS TMAQHAEVLV KSNNLTDRIV VIPGKVEEVS BACU002487/1-576 ILSFFAAQAG ARKIYAVEAS TMAQHAEVLV KSNNLTDRIV VIPGKVEEVS ENSBTAP00000015985/1-534 ILSFFAAQAG ARKIYAVEAS TMAQHAEVLV KSNNLTDRIV VIPGKVEEVS 251 300 ENSTTRP00000015780/1-608 LPEQVDIIIS EPMGYMLFNE RMLESYLHAK KYLRPGGNMF PTIGDVHLAP bmy_13731T0/1-583 LPEQVDVIIS EPMGYMLFNE RMLESYLHAK KYLRPGGNMF PTIGDVHLAP ENSP00000325690/1-608 LPEQVDIIIS EPMGYMLFNE RMLESYLHAK KYLKPSGNMF PTIGDVHLAP BACU002487/1-576 LPEQVDIIIS EPMGYMLFNE RMLESYLHAK KYLRPGGNMF PTIGDVHLAP ENSBTAP00000015985/1-534 LPEQVDIIIS EPMGYMLFNE RMLESYLHAK KYLRPGGNMF PTIGDVHLAP 301 350 ENSTTRP00000015780/1-608 FTDEQLYMEQ FTKANFWYQP SFHGVDLSAL RGAAVDEYFR QPVVDTFDIR bmy_13731T0/1-583 FTDEQLYMEQ FTKANFWYQP SFHGVDLSAL RGAAVDEYFR QPVVDTFDIR ENSP00000325690/1-608 FTDEQLYMEQ FTKANFWYQP SFHGVDLSAL RGAAVDEYFR QPVVDTFDIR BACU002487/1-576 FTDEQLYMEQ FTKANFWYQP SFHGVDLSAL RGAAVDEYFR QPVVDTFDIR ENSBTAP00000015985/1-534 FTDEQLYMEQ FTKANFWYQP SFHGVDLSAL RGAAVDEYFR QPVVDTFDIR 351 400 ENSTTRP00000015780/1-608 ILMAKSVKYT VNFLEAKEGD LHRIEIPFKF HMLHSGLVHG LAFWFDVAFI bmy_13731T0/1-583 ILMAKSVKYT VNFLEAKEGD LHRIEIPFKF HMLHSGLVHG LAFWFDVAFI ENSP00000325690/1-608 ILMAKSVKYT VNFLEAKEGD LHRIEIPFKF HMLHSGLVHG LAFWFDVAFI BACU002487/1-576 ILMAKSVKYT VNFLEAKEGD LHRIEIPFKF HMLHSGLVHG LAFWFDVAFI ENSBTAP00000015985/1-534 ILMAKSVKYT VNFLEAKEGD LHRIEIPFKF HMLHSGLVHG LAFWFDVAFI 401 450 ENSTTRP00000015780/1-608 GSI------- ---------- ---------- ---------- ---------- bmy_13731T0/1-583 GSMVSGCPMA VGLCVNFLDS QAVSAPGLQG TPGWRGTDAW GELRVHKVGA ENSP00000325690/1-608 GSI------- ---------- ---------- ---------- ---------- BACU002487/1-576 GSI------- ---------- ---------- ---------- ---------- ENSBTAP00000015985/1-534 GSI------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000015780/1-608 ---------- ---MTVWLST APTEPLTHWY QVRCLFQSPL FAKAGDTLSG bmy_13731T0/1-583 AAQANACLFL LGRMTVWLST APTEPLTHWY QVRCLFQSPL FAKAGDTLSG ENSP00000325690/1-608 ---------- ---MTVWLST APTEPLTHWY QVRCLFQSPL FAKAGDTLSG BACU002487/1-576 ---------- ---MTVWLST APTEPLTHWY QVRCLFQSPL FAKAGDTLSG ENSBTAP00000015985/1-534 ---------- ---MTVWLST APTEPLTHWY QVRCLFQSPL FAKAGDTLSG 501 550 ENSTTRP00000015780/1-608 TCLLIANK-- ---------- ---------- --------RQ SYDISIVAQV bmy_13731T0/1-583 TCLLIANKRC ELLAGAGGGR GPVHPRSRLM AGPSCLLYRQ SYDISIVA-- ENSP00000325690/1-608 TCLLIANK-- ---------- ---------- --------RQ SYDISIVAQV BACU002487/1-576 TCLLIANK-- ---------- ---------- --------RQ SYDISIVAQV ENSBTAP00000015985/1-534 TCLLIANK-- ---------- ---------- --------RQ SYDISIVAQV 551 600 ENSTTRP00000015780/1-608 DQTGSKSSNL LDLKNPFF-- ---------- --RYTGTTPS PPPGSHYTSP bmy_13731T0/1-583 -QDGPLACTR WEGACPSSPA APQPCRPVRL CRRYTGTTPS PPPGSHYTSP ENSP00000325690/1-608 DQTGSKSSNL LDLKNPFF-- ---------- --RYTGTTPS PPPGSHYTSP BACU002487/1-576 DQTGSKSSNL LDLKNPFF-- ---------- --RYTGTTPS PPPGSHYTSP ENSBTAP00000015985/1-534 DQTGSKSSNL LDLKNPFF-- ---------- --RYTGTTPS PPPGSHYTSP 601 650 ENSTTRP00000015780/1-608 SENMWNTGST YNLSSGMAVA GMPTAYDLSS VIAGGSSVGH NNLIPLANTG bmy_13731T0/1-583 SENMWNTGST YNLSSGMAVA G--------- ---------- ---------- ENSP00000325690/1-608 SENMWNTGST YNLSSGMAVA GMPTAYDLSS VIASGSSVGH NNLIPLANTG BACU002487/1-576 SENMWNTGST YNLSSGMAVA GMPTAYDLSS VIAGGSSVGH NNLIPLANTG ENSBTAP00000015985/1-534 SENMWNAGST YNLSSGMAVA GMPTAYDLSS VIAGGSSVGH NNLIPLANTG 651 700 ENSTTRP00000015780/1-608 IVNHTHSRMG SIMSTGIVQG SSGAQGSSGG SSSAHYAVNS QFTMGGPAIS bmy_13731T0/1-583 --EQARVWVG QV-------- ---------- ---------- ---------- ENSP00000325690/1-608 IVNHTHSRMG SIMSTGIVQG SSGAQGSGGG STSAHYAVNS QFTMGGPAIS BACU002487/1-576 IVNHTHSRMG SIMSTGIVQG SSGAQGSSGG SSSAHYAVNS QFTMGGPAIS ENSBTAP00000015985/1-534 IVNHTHSRMG SIMSTGIVQG SSGAQGSSGG SSSAHYAVNS QFTMGGPAIS 701 750 ENSTTRP00000015780/1-608 MASPMSIPTN TMHYGS bmy_13731T0/1-583 ---PASLPGH TCGAS- ENSP00000325690/1-608 MASPMSIPTN TMHYGS BACU002487/1-576 MASPMSIPTN TMHYGS ENSBTAP00000015985/1-534 MASPMSIPTN TMHYGS