KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:53 2014 Check: 00 .. Name: ENSTTRP00000010974/1-1132 Len: 1133 Check: 534 Weight: 1.00 Name: ENSP00000371067/1-1132 Len: 1133 Check: 8064 Weight: 1.00 Name: ENSBTAP00000015986/1-1133 Len: 1133 Check: 1934 Weight: 1.00 Name: BACU009459/1-105 Len: 1133 Check: 7520 Weight: 1.00 Name: bmy_09768T0/1-790 Len: 1133 Check: 6839 Weight: 1.00 // 1 50 ENSTTRP00000010974/1-1132 MGMACLTMTE MEGTSSSPVH QNGDIPGNAN SVKQIDPILQ VYLYHSLGKA ENSP00000371067/1-1132 MGMACLTMTE MEGTSTSSIY QNGDISGNAN SMKQIDPVLQ VYLYHSLGKS ENSBTAP00000015986/1-1133 MGMACLTMTE MEGTSTSPVH QNGDISGNAN SVKQIDPVLQ VYLYHSLGNA BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010974/1-1132 EGDYLKFPTG EYVAEEICVA ASKACGVTPV YHSMFALMNE TERIWYPPNH ENSP00000371067/1-1132 EADYLTFPSG EYVAEEICIA ASKACGITPV YHNMFALMSE TERIWYPPNH ENSBTAP00000015986/1-1133 EGDYLQFLTG EYVAEEICIA ASKACGITPV YHSMFALMSE TERIWYPPNH BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010974/1-1132 VFHIDESTRH NVLYRVXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000371067/1-1132 VFHIDESTRH NVLYRIRFYF PRWYCSGSNR AYRHGISRGA EAPLLDDFVM ENSBTAP00000015986/1-1133 VFHIDESTRQ NVLYRIRFYF PYWYCNGSNR TYRHGIARGA EAPLLDDFVM BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010974/1-1132 XXXXXXWRHD FLHGWIKVPV THETQEECLG MAVLDMMRIA KEKDQTPLDI ENSP00000371067/1-1132 SYLFAQWRHD FVHGWIKVPV THETQEECLG MAVLDMMRIA KENDQTPLAI ENSBTAP00000015986/1-1133 SYLFAQWRHD FLHGWIKVPV THETQEECLG MAVLDMMRIA KEKNQTPLDI BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000010974/1-1132 YSSVSYKTFL PKCVRAKIQD YHILTRKRIR YRFRRFIEQF SHCKATARNL ENSP00000371067/1-1132 YNSISYKTFL PKCIRAKIQD YHILTRKRIR YRFRRFIQQF SQCKATARNL ENSBTAP00000015986/1-1133 YSSISYKTFL PKCVRAKIQE YHILTRKRIR YRFRRFIEQF SHCKATARNL BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 -----YKTFL PKCVRAKIQD YHILTRKRIR YRFRRFIEQF SHCKATARNL 251 300 ENSTTRP00000010974/1-1132 KLKYLINLET LQSAFYTEQF EVKEPGRGPS GEEIFATIII TGNGGIQWSR ENSP00000371067/1-1132 KLKYLINLET LQSAFYTEKF EVKEPGSGPS GEEIFATIII TGNGGIQWSR ENSBTAP00000015986/1-1133 KLKYLINLET LQSAFYTEQF EVKEPGRGPS GEEIFATIII TGNGGIQWSR BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 KLKYLINLET LQSAFYTEQF EVKEPGRGPS GEEIFATIII TGNGGIQWSR 301 350 ENSTTRP00000010974/1-1132 GKHKESETLT EQDLQLYCDF PDIIDVSIKQ ANQEGSNESR IVTIHKQDGK ENSP00000371067/1-1132 GKHKESETLT EQDLQLYCDF PNIIDVSIKQ ANQEGSNESR VVTIHKQDGK ENSBTAP00000015986/1-1133 GKHKESETLT EQDLQLYCDF PDIIDISIKQ ANQEGANESR IVTIHKQDGK BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 GKHKESETLT EQDLQLYCDF PDIIDVSIKQ ANQEGSNESR IVTIHKQDGK 351 400 ENSTTRP00000010974/1-1132 SLEIELMSLR EALSFVSLID GYYRLTADAH HYLCKEVAPP MVLENIQSNC ENSP00000371067/1-1132 NLEIELSSLR EALSFVSLID GYYRLTADAH HYLCKEVAPP AVLENIQSNC ENSBTAP00000015986/1-1133 SLEIELKSLR EALSFVSLID GYYRLTADAH HYLCKEVAPP MVLENIQSNC BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 SLEIELRSLR EALSFVSLID GYYRLTADAH HYLCKEVAPP MVLENIQSNC 401 450 ENSTTRP00000010974/1-1132 HGPISMDFAI SKLKKTGNQT GLYVLRCSPK DFNKYFLTFA VERENVIEYK ENSP00000371067/1-1132 HGPISMDFAI SKLKKAGNQT GLYVLRCSPK DFNKYFLTFA VERENVIEYK ENSBTAP00000015986/1-1133 HGPISMDFAI SKLKKTGNQT GLYVLRCSPK DFNKYFLTFA VERENVIEYK BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 HGPISMDFAI SKLKKAGNQT GLYVLRCSPK DFNKYFLTFA VERENVIEYK 451 500 ENSTTRP00000010974/1-1132 HCLITKNENG EYNLTGTKKN FSNLKDLLNC YQMETVRSDS IIFQFTKCCP ENSP00000371067/1-1132 HCLITKNENE EYNLSGTKKN FSSLKDLLNC YQMETVRSDN IIFQFTKCCP ENSBTAP00000015986/1-1133 HCLITKNENG EYNLSGTKKN FSNLKDLLNC YQMETVRSDS IIFQFTKCCP BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 HCLITKNENG EYNLSGTKKN FSNLKDLLNC YQMETVRSDS IIFQFTKCCP 501 550 ENSTTRP00000010974/1-1132 PKPKDKSNLL VFRTNGISDV PTSPTLQRHN NVNQMVFHKI RNEDLIFXXX ENSP00000371067/1-1132 PKPKDKSNLL VFRTNGVSDV PTSPTLQRPT HMNQMVFHKI RNEDLIFNES ENSBTAP00000015986/1-1133 PKPKDKSNLL VFRTNGISDV PTSPTLQRHN NVNQMVFHKI RNEDLVFNES BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 PKPKDKSNLL VFRTNGISDV PTSPTLQRHN NVNQMVFHKI RNEDLIFHES 551 600 ENSTTRP00000010974/1-1132 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000371067/1-1132 LGQGTFTKIF KGVRREVGDY GQLHETEVLL KVLDKAHRNY SESFFEAASM ENSBTAP00000015986/1-1133 LGQGTFTKIF KGIRREIGDY GQLHETEVLL KVLDKAHRNY SESFFEAASM BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 LGQGTFTKIF KGVRREVGDY GQLHETEVLL KVLDKAHRNY SESFFEAASM 601 650 ENSTTRP00000010974/1-1132 XXXXXXXXXX XXXXXXXXXX XXILVQEFVK FGSLDIYLKK NKNSINILWK ENSP00000371067/1-1132 MSKLSHKHLV LNYGVCVCGD ENILVQEFVK FGSLDTYLKK NKNCINILWK ENSBTAP00000015986/1-1133 MSQLSHKHLI LNYGVCVCGE ENILVQEFVK FGSLDTYLKK NKNSINILWK BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 MSQLSHKHLV LNYGVCVCGE ENILVQEFVK FGSLDIYLKK NKNSINILWK 651 700 ENSTTRP00000010974/1-1132 LEVAKQLAWA MHFLEEKTLI HGNVCTKNIL LIREEDRKTG NPPFIKLSDP ENSP00000371067/1-1132 LEVAKQLAWA MHFLEENTLI HGNVCAKNIL LIREEDRKTG NPPFIKLSDP ENSBTAP00000015986/1-1133 LEVAKQLAWA MHFLEEKTLI HGNVCAKNIL LIREEDRKTG NPPFIKLSDP BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 LEVAKQLAWA MHFLEEKTLI HGNVCTKNIL LIREEDRKTG NPPFIKLSDP 701 750 ENSTTRP00000010974/1-1132 GISITVLPKD -ILQERIPWV PPECIENPKN LNLATDKWSF GTTLWEICSG ENSP00000371067/1-1132 GISITVLPKD -ILQERIPWV PPECIENPKN LNLATDKWSF GTTLWEICSG ENSBTAP00000015986/1-1133 GISITVLPKD KVLQERIPWV PPECIENPKN LNLATDKWSF GTTLWEICSG BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 GISITVLPKD -ILQERIPWV PPECIENPKN LNLATDKWSF GTTLWEICSG 751 800 ENSTTRP00000010974/1-1132 GDKPLSALDS QRKLQFYENR HQLPAPKWTE LANLINNCMD YEPDFRPSFR ENSP00000371067/1-1132 GDKPLSALDS QRKLQFYEDR HQLPAPKWAE LANLINNCMD YEPDFRPSFR ENSBTAP00000015986/1-1133 GDKPLSALDS QRKLQFYEDR HQLPAPKWTE LANLINNCMD YEPDFRPSFR BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 GDKPLSALDS QRKLQFYENR HQLPAPKWTE LANLINNY-- ---------- 801 850 ENSTTRP00000010974/1-1132 AIIRDLNSLF TPXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000371067/1-1132 AIIRDLNSLF TPDYELLTEN DMLPNMRIGA LGFSGAFEDR DPTQFEERHL ENSBTAP00000015986/1-1133 AIIRDLNSLF TPDYELLTEN DMLPNMRIGA LGFSGAFEDR DPTQFEERHL BACU009459/1-105 ---------- ---------- -MLPNMRIGA LGFSGAFEDR DPTQFEERHL bmy_09768T0/1-790 ---------- ---YELLTEN DMLPNMRIGA LGFSGAFEDR DPTQFEERHL 851 900 ENSTTRP00000010974/1-1132 XXXXXXXXGN FGSVEMCRYD PLQDNTGEVV AVKKLQHSTE EHLRDFEREI ENSP00000371067/1-1132 KFLQQLGKGN FGSVEMCRYD PLQDNTGEVV AVKKLQHSTE EHLRDFEREI ENSBTAP00000015986/1-1133 KFLQQLGKGN FGSVEMCRYD PLQDNTGEVV AVKKLQHSTE EHLRDFEREI BACU009459/1-105 KFLQQLGKGN FGSVEMCRYD PLQDNTGEVV AVKKLQHSTE EHLRDFEREI bmy_09768T0/1-790 KFLQQLGKGN FGSVEMCRYD PLQDNTGEVV AVKKLQHSTE EHLRDFEREI 901 950 ENSTTRP00000010974/1-1132 EILKSLQHDN IVKYKGVCYS AGRRNLRLIM EYLPYGSLRD YLQKHKERID ENSP00000371067/1-1132 EILKSLQHDN IVKYKGVCYS AGRRNLKLIM EYLPYGSLRD YLQKHKERID ENSBTAP00000015986/1-1133 EILKSLQHDN IVKYKGVCYS AGRHNLRLIM EYLPYGSLRD YLQKHKERID BACU009459/1-105 EILKSLQHDN IVKYKGVCYS AGAGVI---- ---------- ---------- bmy_09768T0/1-790 EILKSLQHDN IVKYKGVCYS AGRRNLRLIM EYLPYGSLRD YLQKHKERID 951 1000 ENSTTRP00000010974/1-1132 HKKLLQYTSQ ICKGMEYLGT KRYIHRDLAT RNILVENENR VKIGDFGLTK ENSP00000371067/1-1132 HIKLLQYTSQ ICKGMEYLGT KRYIHRDLAT RNILVENENR VKIGDFGLTK ENSBTAP00000015986/1-1133 HKKLLQYTSQ ICKGMEYLGT KRYIHRDLAT RNILVENENR VKIGDFGLTK BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 HKKLLQYTSQ ICKGMEYLGT KRYIHRDLAT RNILVENENR VKIGDFGLTK 1001 1050 ENSTTRP00000010974/1-1132 VLPQGKEYYK VKEPGESPIF WYAPESLTES KFSVASNVWS FGVVLYELFT ENSP00000371067/1-1132 VLPQDKEYYK VKEPGESPIF WYAPESLTES KFSVASDVWS FGVVLYELFT ENSBTAP00000015986/1-1133 VLPQDKEYYK VKEPGESPIF WYAPESLTES KFSVASDVWS FGVVLYELFT BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 VLPQGKEYYK VKEPGESPIF W--------- ---------- ---------- 1051 1100 ENSTTRP00000010974/1-1132 YIEKSKSPPA EFMRMIGNDK QGQMIVFHLI ELLKNNGRLP RPDGCPDEIY ENSP00000371067/1-1132 YIEKSKSPPA EFMRMIGNDK QGQMIVFHLI ELLKNNGRLP RPDGCPDEIY ENSBTAP00000015986/1-1133 YIDKSKSPPA EFMRMIGNDK QGQMIVFHLI ELLKNNGRLP RPDGCPDEIY BACU009459/1-105 ---------- ---------- ---------- ---------- ---------- bmy_09768T0/1-790 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSTTRP00000010974/1-1132 VIMTECWNNN VNQRPSFRDL ALQVDQIRDS MAG ENSP00000371067/1-1132 MIMTECWNNN VNQRPSFRDL ALRVDQIRDN MAG ENSBTAP00000015986/1-1133 VIMTECWNNN VNQRPSFRDL AVRVDQIRDN MTG BACU009459/1-105 ---------- ---------- ---------- --- bmy_09768T0/1-790 ---------- ---------- ---------- ---