KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:54 2014 Check: 00 .. Name: ENSBTAP00000015993/1-417 Len: 952 Check: 9090 Weight: 1.00 Name: ENSP00000257248/1-417 Len: 952 Check: 7874 Weight: 1.00 Name: ENSTTRP00000008945/1-417 Len: 952 Check: 6898 Weight: 1.00 Name: bmy_16748T0/1-375 Len: 952 Check: 2397 Weight: 1.00 Name: BACU017282/1-952 Len: 952 Check: 6015 Weight: 1.00 // 1 50 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ---------- ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ---------- bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 MVNSNYIKGI QSANILLTLR LVGIQNQRLE QQLTQQIQED TNRRESEITS 51 100 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ---------- ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ---------- bmy_16748T0/1-375 ---------- ---------- ------MDRT GE-------- ---------S BACU017282/1-952 GELALVILAL GACKNLDEEF IRDAHLVSKL GEKFKAETEN METHSGNPLT 101 150 ENSBTAP00000015993/1-417 -MARAALQLL TL-------- ---------- ---------- ---------- ENSP00000257248/1-417 -MAWFALYLL SL-------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 -MTRVTLQLL TL-------- ---------- ---------- ---------- bmy_16748T0/1-375 GMTRVTLQLL TF-------- ---------- ---------- ---------- BACU017282/1-952 NYYQLSLALL TLCLSDGSYS ITNVIPYFTP ENKNYYFGGQ FSVDTGAMAV 151 200 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ---------- ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ---------- bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 LALTCVKRSI EKEKIEADKK DLNKTNVYIT SLVNKILSAK HDGLFGNIFS 201 250 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ------LWAA ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ------LWAT ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ------LWAM bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ------LWAM BACU017282/1-952 TGESMQALFV SSNYYKNEGN CQETLHTVLN NISQGAFYLP IAAAQILPAL 251 300 ENSBTAP00000015993/1-417 TRTS-----T QTRSSCS--- ---------- ---------- ---------- ENSP00000257248/1-417 AGTS-----T QTQSSCS--- ---------- ---------- ---------- ENSTTRP00000008945/1-417 TGTS-----T QTRSSCS--- ---------- ---------- ---------- bmy_16748T0/1-375 TGTS-----T QTGSSCS--- ---------- ---------- ---------- BACU017282/1-952 MGKTYLDVNK DCSSVCSPVK FNISTDKPVT VTPIISPSYI SVSYSVQINE 301 350 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ---------- ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ---------- bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 TFNSTRVTVR KGSVFLDVMK AAQKQNEAAF RFKTEDSPWG PYIISVQDIR 351 400 ENSBTAP00000015993/1-417 ---------- ---------- -VPSAEQPWV DGIQVIMENS VINSTSPNPS ENSP00000257248/1-417 ---------- ---------- -VPSAQEPLV NGIQVLMENS VTSSAYPNPS ENSTTRP00000008945/1-417 ---------- ---------- -VPLAEQPLV NGIQVLMESS VVNSAFPNPS bmy_16748T0/1-375 ---------- ---------- -VPLAEQPLV NGIQVLMESS VVNSAFPNPS BACU017282/1-952 ANNNDRTYWE LLSNGQPLSQ AVPLAEQPLV NGIQVLMESS VVNSAFPNPS 401 450 ENSBTAP00000015993/1-417 VLIAMNLAGA YNVEAQKLLT FDLMASDTAD LTAGQLALTI MALTSSCRDP ENSP00000257248/1-417 ILIAMNLAGA YNLKAQKLLT YQLMSSDNND LTIGQLGLTI MALTSSCRDP ENSTTRP00000008945/1-417 ILIAMNLAGA YNLEAQKNLT FKLMDSDTAD LTVGQLALTI MALTSSCHDP bmy_16748T0/1-375 ILIAMNLAGA YNLEAQKLLT YKLMASDTAD LTIGQLALTI MALTSSCRDP BACU017282/1-952 ILIAMNLAGA YNLEAQKLLT YKLMASNTAD LTIGQLALTI MALTSSCRDP 451 500 ENSBTAP00000015993/1-417 GDKVSTLRTQ MENWTPSSLG SYASTFYGPS LAILALCQNN PETTLPVAAR ENSP00000257248/1-417 GDKVSILQRQ MENWAPSSPN AEASAFYGPS LAILALCQKN SEATLPIAVR ENSTTRP00000008945/1-417 GKKVSILQRQ MENWEPSSLN IPASSFYGPS LAILALCQKH SATTLPIAAR bmy_16748T0/1-375 GNRVSILQRQ MENWAPASLN THASSFYGPS LAILVLCQNN PETTLPIAAR BACU017282/1-952 GNRVSILQRQ MESWAPASLN THASSFYGPS LAILVLCQNN PEKTLPIATR 501 550 ENSBTAP00000015993/1-417 FAKTLLASSS PFDVDAGAVA TLALTCMYNR IPVGSEEGYR ALFAQLLKKI ENSP00000257248/1-417 FAKTLLANSS PFNVDTGAMA TLALTCMYNK IPVGSEEGYR SLFGQVLKDI ENSTTRP00000008945/1-417 FAKSLRANSS PFDVDTGAVV TLALTCMYNK IPIGSEEGYR ALFSQVLKNT bmy_16748T0/1-375 FAKSLLANSS PFNMDTGAMV TLALTCMYHK IPVGSEEGYR VLF------- BACU017282/1-952 FAKSLLANSS PFNVDTGAMV TLALTCMYHK IPVGSEEDYR VLFSQVLKNT 551 600 ENSBTAP00000015993/1-417 VEDISTRIRD NGLIGDVYST GLAMQALSVT PERPNKQWDC QQTMDTVLDE ENSP00000257248/1-417 VEKISMKIKD NGIIGDIYST GLAMQALSVT PEPSKKEWNC KKTTDMILNE ENSTTRP00000008945/1-417 VENISMSILD NGIIGNIYST GLAMQALSVT PEPPKKEWNC QQTMDSVLDE bmy_16748T0/1-375 ---------- ---------- ---XQALSVT PERPNKEWNC QKTMDSVLDE BACU017282/1-952 VENISMRIQD NGIIGDIYST GLAMQALSVT PERPNKEWNC QKTMDSVLDE 601 650 ENSBTAP00000015993/1-417 IKEGKFQNSM SIAQILPSLK GKTYLDVPQV SCSPDQEVQP TQPNFPSPVP ENSP00000257248/1-417 IKQGKFHNPM SIAQILPSLK GKTYLDVPQV TCSPDHEVQP TLPSNPGPGP ENSTTRP00000008945/1-417 MKEGKFHNPM SIAQILPSLK GKTYLDVPHV SCSPGHEVQP TLPSHPSRVP bmy_16748T0/1-375 IKEGKFHNPM SIAQILPSLK GKTYLDVPHV SCSPDHEVQP TLPNPPSPVP BACU017282/1-952 IKEGKFHNPM SIAQILPSLK GKTYLDVPHV SCSPGHEVQP TLPNPPSPVP 651 700 ENSBTAP00000015993/1-417 TSASNITVVY TISNQLRGVE LLFNVTISVS VKKGSVLLVV LEEAQRRNPK ENSP00000257248/1-417 TSASNITVIY TINNQLRGVE LLFNETINVS VKSGSVLLVV LEEAQRKNPM ENSTTRP00000008945/1-417 TSASNITVKY TINNQLRGVE LLFNETINVS VKEGSVLLVV LEEAQRKNPT bmy_16748T0/1-375 TSASNITVKY TINNQLRGVE LLFNETINVS VKRGSVLLVV LEEAQRKNPT BACU017282/1-952 TSAYNITVKY TINNQLRGVE RLFNETINVS VKRGSVLLVV LEEAQRENPT 701 750 ENSBTAP00000015993/1-417 FKFETRMTSW GLEVSSINNI AGNVNDKTYW QFLSGKTPLI EGVA------ ENSP00000257248/1-417 FKFETTMTSW GLVVSSINNI AENVNHKTYW QFLSGVTPLN EGVA------ ENSTTRP00000008945/1-417 FKFETTMTSW GLVVSSINNI AENVTHKTYW QFLSGKTPLN EGVA------ bmy_16748T0/1-375 FKFETTMTSW GPVVSSINNI AENVNHKTFW QFLSGKTPLN E--------- BACU017282/1-952 FKFETTMTSW GPMVSSINNI AENVNHKTYW QFLSGKTPLN EDVSIPEKPK 751 800 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ---------- ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ---------- bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 LRFVERVPLV PKVRREPKNL SDIRGPSTEA TEFTEGSFAI LALGGGYLHW 801 850 ENSBTAP00000015993/1-417 ---------- ---------- ---------- ---------- ---------D ENSP00000257248/1-417 ---------- ---------- ---------- ---------- ---------D ENSTTRP00000008945/1-417 ---------- ---------- ---------- ---------- ---------D bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 GHFEMMRLTI NRSVDPKNTF ASWRVPAPFK PVTRKGMGQR MGGGKGAIDH 851 900 ENSBTAP00000015993/1-417 YI-------- ---------- ---------- ---------- ---------- ENSP00000257248/1-417 YI-------- ---------- ---------- ---------- ---------- ENSTTRP00000008945/1-417 YI-------- ---------- ---------- ---------- ---------- bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 YVTPVKAGRL IVEMGGRCEF QEVQGFLDQV AHKLPFPAKA VSRETLEKMR 901 950 ENSBTAP00000015993/1-417 ---------- ---------- ---------- --PFNHEHIT ANFTQY---- ENSP00000257248/1-417 ---------- ---------- ---------- --PFNHEHIT ANFTQY---- ENSTTRP00000008945/1-417 ---------- ---------- ---------- --PFNCEHIT ANFTQY---- bmy_16748T0/1-375 ---------- ---------- ---------- ---------- ---------- BACU017282/1-952 KDQEERERNN QNPWTFERIV TANMLGIRKV LSPYDLTHKG RYWGKFYMPE 951 1000 ENSBTAP00000015993/1-417 -- ENSP00000257248/1-417 -- ENSTTRP00000008945/1-417 -- bmy_16748T0/1-375 -- BACU017282/1-952 RV