KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:55 2014 Check: 00 .. Name: ENSP00000368686/1-413 Len: 447 Check: 3895 Weight: 1.00 Name: ENSBTAP00000015999/1-404 Len: 447 Check: 2465 Weight: 1.00 Name: ENSTTRP00000009743/1-398 Len: 447 Check: 1284 Weight: 1.00 Name: bmy_05276T0/1-438 Len: 447 Check: 6125 Weight: 1.00 Name: BACU018097/1-438 Len: 447 Check: 5765 Weight: 1.00 // 1 50 ENSP00000368686/1-413 ---------- ---------- ---------- ---MAEAGPQ APPPPGTPSR ENSBTAP00000015999/1-404 ---------- ---------- ---------- ---MAEAGPQ APPPPGTPSR ENSTTRP00000009743/1-398 ---------- ---------- ---------- ---MAEAGPQ APPPPGTPSR bmy_05276T0/1-438 MLAPAAWRPG TEAEVAAAPA WPGLAEGRWR EGAMAEAGPQ APPPPGTPSR BACU018097/1-438 MLAPAAWRPG TEAEVAAAPA WPGLAEGRWR EGAMAEAGPQ APPPPGTPSR 51 100 ENSP00000368686/1-413 HEKSLGLLTT KFVSLLQEAK DGVLDLKLAA DTLAVRQKRR IYDITNVLEG ENSBTAP00000015999/1-404 HEKSLGLLTT KFVSLLQEAK DGVLDLKLAA DTLAVRQKRR IYDITNVLEG ENSTTRP00000009743/1-398 HEKSLGLLTT KFVSLLQEAK DGVLDLKLAA DTLAVRQKRR IYDITNVWEG bmy_05276T0/1-438 HEKSLGLLTT KFVSLLQEAK DGVLDLKLAA DTLAVRQKRR IYDITNVLEG BACU018097/1-438 HEKSLGLLTT KFVSLLQEAK DGVLDLKLAA DTLAVRQKRR IYDITNVLEG 101 150 ENSP00000368686/1-413 IGLIEKKSKN SIQWKGVGPG CNTREIADKL IELKAEIEEL QQREQELDQH ENSBTAP00000015999/1-404 IGLIEKKSKN SIQWKGVGPG CNTREIADKL IELKAEIEEL QQREQELDQH ENSTTRP00000009743/1-398 IGLIEKKSKN SIQWKGVGPG CNTREIADKL IELKAEIEEL QQREQELDQH bmy_05276T0/1-438 IGLIEKKSKN SIQWKGVGPG CNTREIADKL IELKAEIEEL QQREQELDQH BACU018097/1-438 IGLIEKKSKN SIQWKGVGPG CNTREIADKL IELKAEIEEL QQREQELDQH 151 200 ENSP00000368686/1-413 KVWVQQSIRN VTEDVQNSCL AYVTHEDICR CFAGDTLLAI RAPSGTSLEV ENSBTAP00000015999/1-404 KVWVQQSIRN VTEDVHNSCL AYVTHEDICR CFAGDTLLAI RAPSGTSLEV ENSTTRP00000009743/1-398 KVWVQQSIRN VTEDVQNSCL AYVTHEDICR CFAGDTLLAI RAPSGTSLEV bmy_05276T0/1-438 KVWVQQSIRN VTEDVQNSCL AYVTHEDICR CFAGDTLLAI RAPSGTSLEV BACU018097/1-438 KVWVQQSIRN VTEDVQNSCL AYVTHEDICR CFAGDTLLAI RAPSGTSLEV 201 250 ENSP00000368686/1-413 PIPEGLNGQK KYQIHLKSVS GPIEVLLVNK EAWSSPPVAV PVPPPEDLLQ ENSBTAP00000015999/1-404 PIPEGLNGQK KYQIHLKSVS GPIEVLLVNK EAWSSPPVAV PVPPPEDLLQ ENSTTRP00000009743/1-398 PIPEGLNGQK KYQIHLKSIS GPIEVLLVNK EAWSSPPVAV PVPPPEDLLQ bmy_05276T0/1-438 PIPEGLNGQK KYQIHLKSVS GPIEVLLVNK EAWSSPPVAV PVPPPEDLLQ BACU018097/1-438 PIPEGLNGQK KYQIHLKSVS GPIEVLLVNK EAWSSPPVAV PVPPPEDLLQ 251 300 ENSP00000368686/1-413 SPSAVSTPPP LPKPALAQSQ EASRPNSPQL -TPTAVPGSA EVQGMAGPAA ENSBTAP00000015999/1-404 NPPAVSTPPL LPKPSLAQPQ DASRPSSPQA TTPNPVPSST EAQGVAGPAA ENSTTRP00000009743/1-398 SPPAVSTPPP LPKPALVPPQ DASRPSSPQV TTPNPVPGST EAQGVAGPAA bmy_05276T0/1-438 SPPAVSTSPP LPKPALAPPQ DASRPSSPQV TTPNPVPGST EAQGVAGPAA BACU018097/1-438 SPPAVSTSPP LPKPALAPPQ DASRPSSPQV TTPNPVPGST EAQGVAGPAA 301 350 ENSP00000368686/1-413 EITVSGGPGT DSKDSGELSS LPLGPTTLDT RPLQSSALLD SSSSSSSSSS ENSBTAP00000015999/1-404 EIPVSGGHGT ESKDSGELSS LPLGLAALDT RPLQSSALLD SSSSSS---- ENSTTRP00000009743/1-398 ELTVSAIPGI DNKDRGELSS LPL--TALT- -PLQSSA-CD SSSSSSS--- bmy_05276T0/1-438 ELTVSAGPGT DNKDSGELSS LPLGLTALDT RPLQSSALLD SSSSSSS--- BACU018097/1-438 ELTVSAGPGT DNKDGGELSS LPLGLTALDT RPLQSSALLD SSSSSSS--- 351 400 ENSP00000368686/1-413 SSSNSNSSSS SGPNPSTSFE PIKADPTGVL ELPKELSEIF DPTRECMSSE ENSBTAP00000015999/1-404 ------NSSS SGPNPSTSFE PIKADPTGVL ELPKELSEIF DPTRECMSSE ENSTTRP00000009743/1-398 ------NSSS SG--PPSSFE PIKADPTGVL ELPKELSEIF DPTRECMSSE bmy_05276T0/1-438 ------NSSS SGPNPSTSFE PIKADPTGVL ELPKELSEIF DPTRECMSSE BACU018097/1-438 ------NSSS SGPNPSTSFE PIKADPTGVL ELPKELSEIF DPTRECMSSE 401 450 ENSP00000368686/1-413 LLEELMSSEV FAPLLRLSPP PGDHDYIYNL DESEGVCDLF DVPVLNL ENSBTAP00000015999/1-404 LLEELMSSEV FAPLLRLSPP PGDHDYIYNL DESEGVCDLF DVPVLNL ENSTTRP00000009743/1-398 LLEELMSSEV FAPLLRLSPP PGDHDYIYNL DESEGVCDLF DVPVLNL bmy_05276T0/1-438 LLEELMSSEV FAPLLRLSPP PGDHDYIYNL DESEGVCDLF DVPVLNL BACU018097/1-438 LLEELMSSEV FAPLLRLSPP PGDHDYIYNL DESEGVCDLF DVPVLNL