KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:57:56 2014 Check: 00 .. Name: ENSTTRP00000005268/1-416 Len: 455 Check: 6949 Weight: 1.00 Name: ENSP00000288828/1-454 Len: 455 Check: 3068 Weight: 1.00 Name: bmy_12840T0/1-391 Len: 455 Check: 2364 Weight: 1.00 Name: ENSBTAP00000016002/1-436 Len: 455 Check: 8612 Weight: 1.00 // 1 50 ENSTTRP00000005268/1-416 MNLASQSGEA GASQLLFANF NQDVTIGKKA SRKAGPRRRL LLDWSLAVGS ENSP00000288828/1-454 MNLASQSGEA GAGQLLFANF NQDNTEVKGA SRAAGLGRRA VV-WSLAVGS bmy_12840T0/1-391 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016002/1-436 MNLASQSGEA GASQLLFANF NQDVT----- ---------- ----SLAVGS 51 100 ENSTTRP00000005268/1-416 KSGYKFFSLS SVDKLEQIYE CTDTEDVCIV ERLFSSSLVA IVSLKAPRKL ENSP00000288828/1-454 KSGYKFFSLS SVDKLEQIYE CTDTEDVCIV ERLFSSSLVA IVSLKAPRKL bmy_12840T0/1-391 --MWGLFLLS A--------- --DTEDVCIV ERLFSSSLVA IVSLKAPRKL ENSBTAP00000016002/1-436 KSGYKFFSLS SVDKLEQIYE CTDTEDVCIV ERLFSSSLVA IVSLKAPRKL 101 150 ENSTTRP00000005268/1-416 KVCHFKKGTE ICNYSYSNTI LAVKLNRQRL IVCLEESLYI HNIRDMKVLH ENSP00000288828/1-454 KVCHFKKGTE ICNYSYSNTI LAVKLNRQRL IVCLEESLYI HNIRDMKVLH bmy_12840T0/1-391 KVCHFKKGTE ICNYSYSNTI LAVKLNRQRL IVCLEESLYI HNIRDMKVLH ENSBTAP00000016002/1-436 KVCHFKKGTE ICNYSYSNTI LAVKLNRQRL IVCLEESLYI HNIRDMKVLH 151 200 ENSTTRP00000005268/1-416 TIRETPPNPA GLCALSINND NCYLAYPGSA TIGEVQVFDT INLRAANMIP ENSP00000288828/1-454 TIRETPPNPA GLCALSINND NCYLAYPGSA TIGEVQVFDT INLRAANMIP bmy_12840T0/1-391 TIRETPPNPA GLCALSISND NCYLAYPGSA TIGEVQVFDT INLRAANMIP ENSBTAP00000016002/1-436 TIRETPPNPT GLCALSINND NCYLAYPGSA TIGEVQVFDT INLRAANMIP 201 250 ENSTTRP00000005268/1-416 AHDSPLAALA FDASGTKLAT ASEKGTVIRV FSIPEGQKLF EFRRGVKRCV ENSP00000288828/1-454 AHDSPLAALA FDASGTKLAT ASEKGTVIRV FSIPEGQKLF EFRRGVKRCV bmy_12840T0/1-391 AHDSPLAALA FDASGTKLAT ASEKGTVIRV FSIPEGQKLF EFRRGVKRCV ENSBTAP00000016002/1-436 AHDSPLAALA FDASGTKLAT ASEKGTVIRV FSIPEGQKLF EFRRGVKRCV 251 300 ENSTTRP00000005268/1-416 SICSW-FSTN GVFL-TSSNT ETVHIFKLET VKEKPQEEPT TWTGYFGKVL ENSP00000288828/1-454 SICSLAFSMD GMFLSASSNT ETVHIFKLET VKEKPPEEPT TWTGYFGKVL bmy_12840T0/1-391 SICSLAFSTD GVFLSTSSNT ETVHIFKLET VKEKPQEEPT TWTGYFGKVL ENSBTAP00000016002/1-436 SICSLAFSMD GMFLSASSNT ETVHIFKLET VKEKPQEEPT TWTGYFGKVL 301 350 ENSTTRP00000005268/1-416 MASTSYLPSQ VTEXXXXXXX XXXXXXXXXX XXXXXXXXXI QKIPRLLVGA ENSP00000288828/1-454 MASTSYLPSQ VTEMFNQGRA FATVRLPFCG HKNICSLATI QKIPRLLVGA bmy_12840T0/1-391 MASTSYLPSQ VTEMFNQGRA FATVRLPFCG HKNICALATI QKIPRLLVGA ENSBTAP00000016002/1-436 MASTSYLPSQ VTEMFNQGRA FATVRLPFCG HKNICALATI QKIPRLLVGA 351 400 ENSTTRP00000005268/1-416 SDGYLYMYNL DPQEGGECTL MKQHKLDGSM ETTNEILDST SHDCPLVTQT ENSP00000288828/1-454 ADGYLYMYNL DPQEGGECAL MKQHRLDGSL ETTNEILDSA SHDCPLVTQT bmy_12840T0/1-391 SDGYLYMYNL DPQEGGECTL MKQHKLDGSM ETTNEILDST SHDCPLVTQT ENSBTAP00000016002/1-436 SDGYLYMYNL DPQEGGECTL MKQHQLDGSM ETTNEILDST SHDCPLVTQA 401 450 ENSTTRP00000005268/1-416 YSTAVAKAPH VPSSPTAL-- ---------- ---------- ---------- ENSP00000288828/1-454 YGAAAGKGTY VPSSPTRLAY TDDLGAVGGA CLEDEASALR LDEDSEHPPM bmy_12840T0/1-391 YSTAVAKGPH VPSSPTALAY TDELGAAGGA GLEDEASALR L-EDSEHPPM ENSBTAP00000016002/1-436 YSVAVAKGPH VPSSPTALVY TDELGAAGGS GLEEEASALR LEDDSEHPPM 451 500 ENSTTRP00000005268/1-416 ----- ENSP00000288828/1-454 ILRTD bmy_12840T0/1-391 ILRTD ENSBTAP00000016002/1-436 ILRTD