KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:57:57 2014 Check: 00 .. Name: ENSP00000269299/1-291 Len: 315 Check: 7653 Weight: 1.00 Name: ENSBTAP00000016010/1-286 Len: 315 Check: 6137 Weight: 1.00 Name: ENSTTRP00000009167/1-291 Len: 315 Check: 8791 Weight: 1.00 Name: bmy_01771T0/1-309 Len: 315 Check: 2465 Weight: 1.00 Name: BACU001268/1-286 Len: 315 Check: 8142 Weight: 1.00 // 1 50 ENSP00000269299/1-291 MTKEYQDLQH LDNEESDHHQ LRKGPPPPQP LLQRLCSGPR LLLLSLGLSL ENSBTAP00000016010/1-286 MTKEYQDLQH LDNEENDHQH -RKRPLPPHS FSRRLCTGPS LLLVSMGLSL ENSTTRP00000009167/1-291 MTKEYQDLQH LDNEENDHQH -RKRPPPPHS LFRRLCSGPS LILISIGLSL bmy_01771T0/1-309 MTKEYQDLQH LDNEENDHQH -RKRPPPPHS LFRRLCSGPS LILISIGLSL BACU001268/1-286 MTKEYQDLQH LDNEENDHQH -RKRPPPPHS LFRRLRSGPS LILISIGLSL 51 100 ENSP00000269299/1-291 LLLVVVCVIG SQNSQLQEEL RGLRETFSNF TASTEAQVKG LSTQGGNVGR ENSBTAP00000016010/1-286 LLLVVLCVIG SQNSKLQEEL SALRETFSNL TVSTEAKVKA LSVQGGNVGR ENSTTRP00000009167/1-291 LLLVVVCVIG SQNSKLQEEL RALRETFSNL TVSTEAKVKA LSVQGGNVGR bmy_01771T0/1-309 LLLVVVCVIG SQNSKLQEEL RALRETFSNL TVSTEAKVKA LSVQGGNVGR BACU001268/1-286 LLLVVVCVIG SQNSKLQEEL RALRETFSNL TVSTEAKVKA LSVQGGNVGR 101 150 ENSP00000269299/1-291 KMKSLESQLE KQQKDLSEDH SSLLLHVKQF VSDLRSLSCQ MAALQGNG-- ENSBTAP00000016010/1-286 KVKSLESQLE KQQQELNADH SSLLLHVKQF VSDLRSLSCQ MAVLQGNG-- ENSTTRP00000009167/1-291 KMKSLESQLE KQQQDLSEDH SSLLLHVKQF VSDLRSLSCQ MAVLQGNG-- bmy_01771T0/1-309 KMKSLESQLE KQQQDLSEDH SSLLLHVQQF VSDLRSLSCQ VAVLQGNGEG BACU001268/1-286 KMKSLESQLE KQQQDLSEDH SSLLLHVKHF VSDLRSLSCQ MAVLQGNG-- 151 200 ENSP00000269299/1-291 ---------- ---------- -SERTCCPVN WVEHERSCYW FSRSGKAWAD ENSBTAP00000016010/1-286 ---------- ---------- -SEKACCPVN WIDYEGSCYW FSRSGKPWPE ENSTTRP00000009167/1-291 ---------- ---------- -SERTCCPVN WVDFEGKCYW FSRSGKPWPE bmy_01771T0/1-309 VGAARPRFPA HFRSAPHPPS ACERTCCPVN WVEHEGSCYW FSRSGKPWPE BACU001268/1-286 ---------- ---------- -SERTCCPVN WVEHEGSCYW FSRSGKPWPE 201 250 ENSP00000269299/1-291 ADNYCRLEDA HLVVVTSWEE QKFVQHHIGP VNTWMGLHDQ NGPWKWVDGT ENSBTAP00000016010/1-286 AEKYCQLENA HLVVVGSWEE QKFIQHHMGP VNTWIGLMDQ NGPWKWVDGT ENSTTRP00000009167/1-291 AEKYCQLEDA HLVVVGSWEE QKFIQHHMGP VNTWMGLTDQ NGPWKWVDGT bmy_01771T0/1-309 AEKYCQLEDA HLVVVGSWEE QKFIQHHMGP VNTWMGLTDQ NGPWKWVDGT BACU001268/1-286 AEKYCQLEDA HLVVVGSWEE QKFIQHHMGP VNTWMGLTDQ NGPWKWVDGT 251 300 ENSP00000269299/1-291 DYETGFKNWR PEQPDDWYGH GLGGGEDCAH FTDDGRWNDD VCQRPYRWVC ENSBTAP00000016010/1-286 DYETGFKNWA PEQPDDWYGH GLGGGEDCAH ITVDGRWNDD VCLRPYRWVC ENSTTRP00000009167/1-291 DYESGFKNWR PEQPDDWYGH GLGGGEDCAH FTDDGRWNDD VCQRPYRWVC bmy_01771T0/1-309 DYESGFKNWR PEQPDDWYGH GLGGGEDCAH FTGDGRWNDD VCQRPYRWVC BACU001268/1-286 DYESGFKNWR PEQPDDWYGH GLGGGEDCAH FTDDGRWNDD VCQRPYRWVC 301 350 ENSP00000269299/1-291 ETELDKASQE -PPLL ENSBTAP00000016010/1-286 EAQRDGGNDS ----- ENSTTRP00000009167/1-291 ETQRDRDSEN QPPLP bmy_01771T0/1-309 ETQRDRDSES ----- BACU001268/1-286 ETQRDRDSES -----