KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:00 2014 Check: 00 .. Name: ENSP00000343746/1-525 Len: 547 Check: 5194 Weight: 1.00 Name: ENSBTAP00000016014/1-525 Len: 547 Check: 6055 Weight: 1.00 Name: ENSTTRP00000010272/1-525 Len: 547 Check: 540 Weight: 1.00 Name: bmy_01809T0/1-506 Len: 547 Check: 1206 Weight: 1.00 Name: BACU017568/1-530 Len: 547 Check: 40 Weight: 1.00 // 1 50 ENSP00000343746/1-525 ---------- ---------- --MSWHPQYR SSKFRHVFGK PASKENCYDS ENSBTAP00000016014/1-525 ---------- ---------- --MSWHPQYR SSKFRHVFGK PASKENCYDS ENSTTRP00000010272/1-525 ---------- ---------- --MSWHPQYR SSKFRHVFGK PASKENCYDS bmy_01809T0/1-506 MSKKKRNLGI WVGTQAEFGL DPMSWHPQYR SSKFRHVFGK PASKENCYDS BACU017568/1-530 MKSKQ----- ---------- --MSWHPQYR SSKFRHVFGK PASKENCYDS 51 100 ENSP00000343746/1-525 VPITRSVHDN HFCAVNPHFI AVVTECAGGG AFLVIPLHQT GKLDPHYPKV ENSBTAP00000016014/1-525 VPITHSVQDN HFCAVNPHFI AVVTECTGGG AFLVIPLHQT GKLDPHYPKV ENSTTRP00000010272/1-525 VPITRSVHDN HFCAVNPHFI AVVTECAGGG AFLVIPLHQT GKLDPHYPKV bmy_01809T0/1-506 VPITRSVHDN HFCAVNPHFI AVVTECAGGG AFLVIPLHQT GKLDPHYPKV BACU017568/1-530 VPITRSVHDN HFCAVNPHFI AVVTECAGGG AFLVIPLHQT GKLDPHYPKV 101 150 ENSP00000343746/1-525 CGHRGNVLDV KWNPFDDFEI ASCSEDATIK IWSIPKQLLT RNLTAYRKEL ENSBTAP00000016014/1-525 CGHRGNVLDV KWNPFNDFEI ASCSEDATIK IWDIPKQLLT KNLTAFRKEL ENSTTRP00000010272/1-525 CGHRGNVLDV KWNPFNDFEI ASCSEDATIK IWDIPKQLLA KNLTVCKKEL bmy_01809T0/1-506 CGHRGNVLDV KWNPFNDFEI ASCSEDATIK IWDIPKQLLA KNLTAFKKEL BACU017568/1-530 CGHRGNVLDV KWNPFNDFEI ASCSEDATIK IWDIPKQLLA KNLTAFKKEL 151 200 ENSP00000343746/1-525 VGHARRVGLV EWHPTAANIL FSAGYDYKVM IWNLDTKESV ITSPMSTISC ENSBTAP00000016014/1-525 VGHARKVGLV EWHPTAANIL FSSGYDYKVM VWNLDSKESV IMSPVKTINC ENSTTRP00000010272/1-525 VGHARRVGLV EWHPTAASIL FSSGYDYKVM VWNLDTKEAV IMSPVKTINC bmy_01809T0/1-506 VGHARRVGL- ---------- --------VM VWNLDTKEAV IVSPVKTINC BACU017568/1-530 VGHARRVGLV EWHPTAASIL FSSGYDYKVM VWNLDTKEAV IMSPVKTINC 201 250 ENSP00000343746/1-525 HQDVILSMSF NTNGSLLATT CKDRKIRVID PRAGTVLQEA SYKGHRASKV ENSBTAP00000016014/1-525 HQDVILSMSF NTNGSLLATA CKDRKIRVLD PRAGTVLQEA NYKGHRANKV ENSTTRP00000010272/1-525 HQDVXXXXXX XXXXXXXXXX XXXXXXXXXD PRAGAVLQEA SYKGHRANKV bmy_01809T0/1-506 HQDVILSMSF NTNGSLLATA CKDRKIRVVD PRAGAVLQEA SYKGHRASKV BACU017568/1-530 HQDVILSMSF NTNGSLLATA CKDRKIRVVD PRAGAVLQEA SYKGHRASKV 251 300 ENSP00000343746/1-525 LFLGNLKKLM STGTSRWNNR QVALWDQDNL SVPLMEEDLD GSSGVLFPFY ENSBTAP00000016014/1-525 LFLGNLKKLL STGTSRWNNR QMALWDQDDL SVPVTEVDLD GSSGVLFPFY ENSTTRP00000010272/1-525 LFLGNLKKLL STGTSRWNNR QMALWDQDDL SVPLAEEDLD GSSGVLFPFY bmy_01809T0/1-506 LFLGNLKKLL STGTSRWNNR QMALWDQDDL SVPLAEEDLD GSSGVLFPFY BACU017568/1-530 LFLGNLKKLL STGTSRWNNR QMALWDQDDL SVPLAEEDLD GSSGVLFPFY 301 350 ENSP00000343746/1-525 DADTSMLYVV GKGDGNIRYY EVSADKPHLS YLTEYRSYNP QKGIGVMPKR ENSBTAP00000016014/1-525 DADTNMLYVV GKGDRNIHYY EISANKPHLN YLMEYHSYNP QKGIGVMPKR ENSTTRP00000010272/1-525 DSDTNMLYVV GKGDGNIRYY EVSTDKPHLN YLTEYRSYNP QKGIGVMPKR bmy_01809T0/1-506 DSDTNMLYVV GKGDGNIRYY EVSSDKPHLN YLTEYRSYNP QKGIGVMPKR BACU017568/1-530 DADTNMLYVV GKGDGNIRYY EVSTDKPHLN YLTEYRSYNP QKGIGVMPKR 351 400 ENSP00000343746/1-525 GLDVSSCEIF RFYKLITTKS LIEPISMIVP RRSESYQEDI YPPTAGAQPS ENSBTAP00000016014/1-525 GLDVSSCEIF RFYKLITTKS LIEPVSMIVP RRSESYQEDI YPPTASAQPS ENSTTRP00000010272/1-525 GLDVSSCEIF RFYKLITTKS LIEPISMIVP RRXXXXXXXX XXXXXXXXXX bmy_01809T0/1-506 GLDVSSCEIF RFYKLITTKS LIEPISMIVP RR-------- ---------- BACU017568/1-530 GLDVSSCEIF RFYKLITTKS LIEPISMIVP RRSESYQEDI YPPTAGAQPS 401 450 ENSP00000343746/1-525 LTAQEWLSGM NRDPILVSLR PGSELLRPHP LPAERPIFNS MAPASPRLLN ENSBTAP00000016014/1-525 LTAQEWLSGM NKEPVLMSLR PGAEPLSPQP LPSERTLSMP TAPTSPHLFN ENSTTRP00000010272/1-525 XXXXXXXSGM NKGPVLMSLR PGSELLSPQP LPPERPPSKP RPHTSPRLFN bmy_01809T0/1-506 ----EWLSGM NKGPVLMSLR PGSELLSPQP LPPERPLSKP RAHTSPRLFN BACU017568/1-530 LTAQEWLSGM NKGPVLMSLR PGSELLSPQP LPPERPLSKP RAHTSPRLFN 451 500 ENSP00000343746/1-525 QTEKLAAEDG WRSSSLLEEK MPRWAAEHRL EEKKTWLTNG FDVFECPPPK ENSBTAP00000016014/1-525 QTESLVAEDG RRPFSLLEEK APRWAAEHRQ EEKKTWLSDG FDIFECPPPK ENSTTRP00000010272/1-525 QTEKLAAEDG RRPLSLLEER APRWVAEHRL EEKKTWFTNG FDIFECPPPK bmy_01809T0/1-506 QTEKLAAEDG RRPLSLLEER APRWASEHRL EEKKTWFTNG FDIFECPPPK BACU017568/1-530 QTEKLAAEDG RRPLSLLEER APRWASEHRL EEKKTWFTNG FDIFECPPPK 501 550 ENSP00000343746/1-525 TENELLQMFY RQQEEIRRLR ELLTQREVQA KQLELEIKNL RMGSEQL ENSBTAP00000016014/1-525 TENELLQMFY RQQDEIRRLR ELVTQREVQA KQLELEIRNL RMNSPRL ENSTTRP00000010272/1-525 TENELLQMFY RQQDEIRRLR ELVTQREVQA KQLELEIKNL RMGSERL bmy_01809T0/1-506 TENELLQMFY RQQDEIRRLR ELVTQREVQA KQLELEIKNL RMDSERL BACU017568/1-530 TENELLQMFY RQQDEIRRLR ELVTQREVQA KQLELEIKNL RMDSERL