KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:01 2014 Check: 00 .. Name: ENSP00000331608/1-501 Len: 506 Check: 5809 Weight: 1.00 Name: ENSBTAP00000016022/1-502 Len: 506 Check: 9431 Weight: 1.00 Name: BACU001865/1-257 Len: 506 Check: 230 Weight: 1.00 Name: bmy_02343T0/1-486 Len: 506 Check: 2146 Weight: 1.00 // 1 50 ENSP00000331608/1-501 MSFPQLGYQY IRPLYPSERP GAAGGSGGSA GARGGLGAGA SELNASGSLS ENSBTAP00000016022/1-502 MSFPQLGYQY IRPLYPPERP GAAAG-GGSA GARGGPGAGA SELAASGSLS BACU001865/1-257 MCVQ------ ---------- ---------- ---------- ---------- bmy_02343T0/1-486 MSFPQLGYQY IRPLYPPERP GAAAG-GGSA GARGGPGAGA SELAASGSLS 51 100 ENSP00000331608/1-501 NVLSSVYGAP YA-AAAAAAA AQGYGAFLPY AAELPIFPQL GAQYELKDSP ENSBTAP00000016022/1-502 NVLSSVYGAP YAAAAAAAAA AQGYGAFLPY AAELPIFPQL GTQYELKDSP BACU001865/1-257 ---------- ---------- ---------- ---------- GTQYELKDSP bmy_02343T0/1-486 NVLSSVYGAP YAAAAAAAAA AQGYGAFLPY AAELPIFPQL GTQYELKDSP 101 150 ENSP00000331608/1-501 GVQHPAAAAA FPHPHPAFYP YGQYQFGDPS RPKNATREST STLKAWLNEH ENSBTAP00000016022/1-502 GVQHTAAATA FPHPHPAFYP YGQYQFGDPS RPKNATREST STLKAWLNEH BACU001865/1-257 GVQHPAAATA FPHPHPAFYP YGQYQFGDPS RPKNATREST STLKAWLNEH bmy_02343T0/1-486 GVQHPAAATA FPHPHPAFYP YGQYQFGDPS RPKNATREST STLKAWLNEH 151 200 ENSP00000331608/1-501 RKNPYPTKGE KIMLAIITKM TLTQVSTWFA NARRRLKKEN KMTWAPRSRT ENSBTAP00000016022/1-502 RKNPYPTKGE KIMLAIITKM TLTQVSTWFA NARRRLKKEN KMTWAPRSRT BACU001865/1-257 RKNPYPTKGE KIMLAIITKM TLTQVSTWFA NARRRLKKEN KMTWAPRSRT bmy_02343T0/1-486 RKNPYPTKGE KIMLAIITKM TLTQVSTWFA NARRRLKKEN KMTWAPRSRT 201 250 ENSP00000331608/1-501 DEEGNAYGSE REEEDEEEDE EDGKRELELE EEELGGEEED TGGEGLADDD ENSBTAP00000016022/1-502 DEEGNAYGSE REEEDEEEDE EDSKRELELE EEELGGEEED TGGEGLADDD BACU001865/1-257 DEEGNAYGSE REEEDEEEDE EDSKRELELE EEELGGEEED TGGEGLADDD bmy_02343T0/1-486 DEEGNAYGSE REEEDEEEDE EDSKRELELE EEELGGEEED TGGEGLADDD 251 300 ENSP00000331608/1-501 EDEEIDLENL DGAATEPELS LAGAARRDGD LGLGPISDSK NSDSEDSSEG ENSBTAP00000016022/1-502 EDEEIDLENL DGAVAGPELA LTGASHRDGD LGLEPISDSK NSDSEDSSEG BACU001865/1-257 EDEEIDLENL DGAAAGPELA LTGAAHRDGD LGLEPISDSK NSDSDDSSEG bmy_02343T0/1-486 EDEEIDLENL DGAAAGPELA LTGAAHRDGD LGLEPISDSK NSDSDDSSEG 301 350 ENSP00000331608/1-501 LEDRPLPVLS LAPAPPPVAV ASPSLPSPPV SLDPCAPAPA PASALQKPKI ENSBTAP00000016022/1-502 LEERPLPILS LAPVPPPVAT APPSPPSPPA GLDPCAPAPA PASALQKPKI BACU001865/1-257 LEEH------ ---------- ---------- ---------- ---------- bmy_02343T0/1-486 LEERPLPVLS LAPVPPPVAA TPPSPPSPSA GLDPCAPAPA PASALQKPKI 351 400 ENSP00000331608/1-501 WSLAETATSP DNPRRSPPGA GGSPPGAAVA PSALQLSPAA AAAAAHRLVS ENSBTAP00000016022/1-502 WSLAETATSP DNPRRSPQGA GGSPPGAAVA PSALQLSP-A AAAAAHRLVS BACU001865/1-257 ---------- ---------- ---------- ---------- ---------- bmy_02343T0/1-486 WSLAETATSP DNPRRSPPGA GGSPPGAAVA PPALQLSP-A AAAAAQRLVS 401 450 ENSP00000331608/1-501 APLGKFPAWT NRPFPGPPPG PR--LHPLSL LGSAPPHLLG LPGAAGHP-- ENSBTAP00000016022/1-502 APLGKFPAWT NRPFPGPPPG PR--PHPLSL LGSGPPHLLG LPGAAGHPAA BACU001865/1-257 ---------- ---------- ---------- ---------- ---------- bmy_02343T0/1-486 APLGKFSAWT NRPFPGPPPG PRPHPHPLSL LGSAPPHLLG LPGAAGHP-A 451 500 ENSP00000331608/1-501 AAAAAFARPA EPEGGTDRCS ALEVEKKLLK TAFQPVPRRP QNHLDAALVL ENSBTAP00000016022/1-502 AAAAAFARPA EPEGGTDRCS ALEVEKKLLK TAFQPVPRRP QNHLDAALVL BACU001865/1-257 ---------- -------RCS ALEVEKKLLK TAFQPVPRRP QNHLDAALVL bmy_02343T0/1-486 AAAAAFARPA EPEGGTDRCS ALEVEKKLLK TAFQPVPRR- ---------- 501 550 ENSP00000331608/1-501 SALSSS ENSBTAP00000016022/1-502 SALSSS BACU001865/1-257 SALSSS bmy_02343T0/1-486 ------