KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:05 2014 Check: 00 .. Name: ENSP00000283206/1-555 Len: 558 Check: 9817 Weight: 1.00 Name: ENSBTAP00000016043/1-556 Len: 558 Check: 2258 Weight: 1.00 Name: ENSTTRP00000015598/1-554 Len: 558 Check: 6135 Weight: 1.00 Name: bmy_09018T0/1-526 Len: 558 Check: 8101 Weight: 1.00 Name: BACU017745/1-492 Len: 558 Check: 5705 Weight: 1.00 // 1 50 ENSP00000283206/1-555 MVAACRSVAG LLPRRRRCFP ARAPLLRVAL CLLCWTPAAV RAVPELGLWL ENSBTAP00000016043/1-556 MAAVCRDGVW LPPRRR--LP AGRPLLCFAL CLLCCGPAAV GAVPEIGLWT ENSTTRP00000015598/1-554 MAATSWAGVW FSSRGR--LP ARRPLLRVTL CLLCWGPAAV GAVPELGLWA bmy_09018T0/1-526 MAATSWAGVW LPSRGR--LP ARRPLLRVAL CLLCWGPAAV GAVPELGLWA BACU017745/1-492 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000283206/1-555 ETVNDKSGPL IFRKTMFNST DIKLSVKSFH CSGPVKFTIV WHLKYHTCHN ENSBTAP00000016043/1-556 ATISDKSGPL IFRKTMFNST EIKFSVKSFS CPRTVKFTIE WHLEHHTCHN ENSTTRP00000015598/1-554 ATINDKSGPL IFRKTMFNST EIKFSVKSFS CPGPVKFTIV WLLEHHPCHN bmy_09018T0/1-526 ATINDKSGPL IFRKTMFNST EIKFSVKSFS CSGPVKFTIV WLLEHHTCHN BACU017745/1-492 ---------- -----MFNST EIKFSVKSFS CSGPVKFTIV WLLEHHTCHH 101 150 ENSP00000283206/1-555 EHSNLEELFQ KHKLSVDEDF C-HYLKNDNC WTTKNENLDC NSDSQVFPSL ENSBTAP00000016043/1-556 DYSELEELSQ KHELPVTEDF CGHYFKNSEC WTTKNENVEC GGDLQLFPPL ENSTTRP00000015598/1-554 QYSELEELSQ KHELSVSEDF CGHY-NSSEC WTTKNENLDC NSDSQTFPSL bmy_09018T0/1-526 DYSELEELSR KHELSVSEDF CGHYFKNSEC WTTKNENLDC NSDLQVFPSL BACU017745/1-492 EYSELEELSQ KHELSVSEDF CGHYFKNSEC WTTKSENLDC NSDLQVFPSL 151 200 ENSP00000283206/1-555 NNKELI-NIR NVSNQERSMD VVARTQKDGF HIFIVSIKTE NTDASWNLNV ENSBTAP00000016043/1-556 NNKQLISNTG NVSNQEGSTD VVAKTQRDGF HIFIVSVKTE KTDASWNLNV ENSTTRP00000015598/1-554 NNKELRTNTG SVTNQEGSAD VVAKTQRDGF HIFIVSIKTE KTDASWNLNV bmy_09018T0/1-526 NNKELITNTG NVSNQEGSAD VVAKTQRDGF HIFIVSIKTE KTDASWNLNV BACU017745/1-492 NNKELITNTG NVSNQEGSAD VVAKTQRDGF HIFIVSVKTE KTDASWNLNV 201 250 ENSP00000283206/1-555 SLSMIGPHGY ISASDWPLMI FYMVMCIVYI LYGILWLTWS ACYWKDILRI ENSBTAP00000016043/1-556 SLSMLGPYGY ISASDWPLMI FYMVMCIVYI LYGVLWLMWS ACYWKDILRI ENSTTRP00000015598/1-554 SLSMMGPHGY ISASDWPLMI FYMVMCIVYI LYGILWLMWS ACYWKDILRI bmy_09018T0/1-526 SLSTMGPHGY ISASDWPLMI FYMVMCIVYI LYGILWLMWS ACYWKDILRI BACU017745/1-492 SLSTMGPHGY ISASDWPLMI FYMVMCIVYI LYGILWLMWS ACYWKDILRI 251 300 ENSP00000283206/1-555 QFWIAAVIFL GMLEKAVFYS EYQNISNTGL STQGLLIFAE LISAIKRTLA ENSBTAP00000016043/1-556 QFWIAAVIFL GMLEKAVFYA EYQNINSTGL STQGLLIFAE LISAIKRTLA ENSTTRP00000015598/1-554 QFWIAAVIFL GMLEKAVFYA EYQNINSTGL STQSLLIFAE LISAIKRTLA bmy_09018T0/1-526 QFWIAAVIFL GMLEKAVFYA EYQNINSTGL STQGLLIFAE LISAIKRTLA BACU017745/1-492 QFWIAAVIFL GMLEKAVFYA EYQNINSTGL STQGLLIFAE LISAIKRTLA 301 350 ENSP00000283206/1-555 RLLVIIVSLG YGIVKPRLGT VMHRVIGLGL LYLIFAAVEG VMRVIGGSNH ENSBTAP00000016043/1-556 RLLVIIVSLG YGIVKPRLGT VMHRVIGLGV LYFIFAAVEG VMRVIGGSNH ENSTTRP00000015598/1-554 RLLVIIVSLG YGIVKPRLGT VMHRVIGLGI LYFIFAAAEG VIRVIGGSNH bmy_09018T0/1-526 RLLVIIVSLG YGIVKPRLGT VMHRVIGLGI LYFIFAATES VIRVIGDSNH BACU017745/1-492 RLLVIIVSLG YGIVKPRLGT VVHRVIGLGI LYFIFAATES VIRVIGGSNH 351 400 ENSP00000283206/1-555 LAVVLDDIIL AVIDSIFVWF -IFISLAQTM KTLRLRKNTV KFSLYRHFKN ENSBTAP00000016043/1-556 LAVVLGDIIL ALIDSIFVWF IIFISLAQTM KTLRLRKNTV KFSLYRHFTN ENSTTRP00000015598/1-554 LAVVFGDIIL AVIDSIFVWF -IFVSLAQTM KTLRLRKNTV KFSLYRHFTN bmy_09018T0/1-526 LAVVFADIIL AVIDSIFVWF -IFVSLAQTM KTLRLRKNTV KFSLYRHFTN BACU017745/1-492 LAVVFADIIL AVIDSIFVWF -IFISLAQTM KTLRLRKNTV KFSLYRHFTN 401 450 ENSP00000283206/1-555 TLIFAVLASI VFMGWTTKTF RIAKCQSDWM ERWVDDAFWS FLFSLILIVI ENSBTAP00000016043/1-556 TLIFAILASV VFMVWTTKTF RFAKCQSDWM ERWVDDAFWS FLFSLILIVI ENSTTRP00000015598/1-554 TLIFAIMASV VFTVWTTKTF RIAKCQSDWM ERWIDDAFWS FLFSLILIVI bmy_09018T0/1-526 TLIFAIMASL VFMVWTTKTF RIAKCQSDWM ERWVDDAFWS FLFSLILIVI BACU017745/1-492 TLIFAIMASL VFMVWTTKTF RIAKCQSDWM ERWVDDAFWS FLFSLILIVI 451 500 ENSP00000283206/1-555 MFLWRPSANN QRYAFMPLID DSDDEIEEFM VTSENLTEGI KLRASKSVSN ENSBTAP00000016043/1-556 MFLWRPSANN QRYAFMPLID DSDDEIEEFM VASENLTEGI KLRASKTVSN ENSTTRP00000015598/1-554 MFLWRPSANN QRYAFMPLID DSDDEIEEFM VTSENLTEGI KLRVSKMVSN bmy_09018T0/1-526 MFLWRPSANN QRYAFMPLID DSDDEIEEFM VTSENLTEGI KLRVSKTVSN BACU017745/1-492 MFLWRPSANN QRYAFMPLID DSDDEIEEFM VTSENLTEGI KLRVSKTVSN 501 550 ENSP00000283206/1-555 GTAKPATSEN FDEDLKWVEE NIPSSFTDVA LPVLVDSDEE IMTRSEMAEK ENSBTAP00000016043/1-556 GTAKSATSDN FSEDLKWVEE NIPSSFTDVA LPVLVDSDEE IMTRSEMAEK ENSTTRP00000015598/1-554 GTAKPATSDN FDEDLKWVEE NIPSSFTDVV LPVLVDSDEE IMTRSEMAEK bmy_09018T0/1-526 GTAKPATSDN FDEDLKWVEE NIPSSFTDV- ---------- ---------- BACU017745/1-492 GTAKPATSDN FDEDLKWVEE NIPSSFTDVA LPVLVDSDEE IMTRSEMAEK 551 600 ENSP00000283206/1-555 MFSSEKIM ENSBTAP00000016043/1-556 MFSSEKIM ENSTTRP00000015598/1-554 MFSSEKIM bmy_09018T0/1-526 -------- BACU017745/1-492 MFSSEKIM