KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:06 2014 Check: 00 .. Name: ENSTTRP00000013565/1-1275 Len: 1328 Check: 5275 Weight: 1.00 Name: ENSP00000245934/1-1274 Len: 1328 Check: 2388 Weight: 1.00 Name: ENSBTAP00000016048/1-1272 Len: 1328 Check: 7748 Weight: 1.00 Name: bmy_06573T0/1-1288 Len: 1328 Check: 9654 Weight: 1.00 Name: BACU002125/1-1316 Len: 1328 Check: 890 Weight: 1.00 // 1 50 ENSTTRP00000013565/1-1275 ---------- ---------- ---------- ---------- ---------- ENSP00000245934/1-1274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016048/1-1272 ---------- ---------- ---------- ---------- ---------- bmy_06573T0/1-1288 SVTAASGRWR RCLWRGAAEG A--RGGRRPE P--------- ------REYQ BACU002125/1-1316 --------MK GC--PGVVGG GERKAGRAAE VVQQVFAVSP LHVKYWREYQ 51 100 ENSTTRP00000013565/1-1275 ---MAGSSGD SVTRRSVASQ FFTQEEGPGI DGMTTSERVV DLLNQAALIT ENSP00000245934/1-1274 ---MASGSGD SVTRRSVASQ FFTQEEGPGI DGMTTSERVV DLLNQAALIT ENSBTAP00000016048/1-1272 ---MAASSGD SVTRRSVASQ FFTQEEGPGI DGMTTSERVV DLLNQAALIT bmy_06573T0/1-1288 AAAMAGSSGD SVTRRSVASQ FFTQEEGPGI DGMTTSERVV DLLNQAALIT BACU002125/1-1316 AATMAGSSGD SVTRRSVASQ FFTQEEGPGI DGMTTSERVV DLLNQAALIT 101 150 ENSTTRP00000013565/1-1275 NDSKITVLKQ VQELIINKDP TLLDNFLDEI IAFQADKSIE VRKFVIGFIE ENSP00000245934/1-1274 NDSKITVLKQ VQELIINKDP TLLDNFLDEI IAFQADKSIE VRKFVIGFIE ENSBTAP00000016048/1-1272 NDSKITVLKQ VQELIINKDP TLLDNFLDEI IAFQADKSIE VRKFVIGFIE bmy_06573T0/1-1288 NDSKITVLKQ VQELIINKDP TLLDNFLDEI IAFQADKSIE VRKFVIGFIE BACU002125/1-1316 NDSKITVLKQ VQELIINKDP TLLDNFLDEI IAFQADKSIE VRKFVIGFIE 151 200 ENSTTRP00000013565/1-1275 EACKRDIELL LKLIANLNML LRDENVNVVK KAILTMTQLY KVALQWMVKS ENSP00000245934/1-1274 EACKRDIELL LKLIANLNML LRDENVNVVK KAILTMTQLY KVALQWMVKS ENSBTAP00000016048/1-1272 EACKRDIELL LKLIANLNML LRDENVNVVK KAILTMTQLY KVALQWMVKS bmy_06573T0/1-1288 EACKRDIELL LKLIANLNML LRDENVNVVK KAILTMTQLY KVALQWMVKS BACU002125/1-1316 EACKRDIELL LKLIANLNML LRDENVNVVK KAILTMTQLY KVALQWMVKS 201 250 ENSTTRP00000013565/1-1275 RVISELQEAC WDMVSAMAGD IILLLDSDND GIRTHAIKFV EGLIVTLSPR ENSP00000245934/1-1274 RVISELQEAC WDMVSAMAGD IILLLDSDND GIRTHAIKFV EGLIVTLSPR ENSBTAP00000016048/1-1272 RVISELQEAC WDMVSAMAGD IILLLDSDND GIRTHAIKFV EGLIVTLSPR bmy_06573T0/1-1288 RVISELQEAC WDMVSAMAGD IILLLDSDND GIRTHAIKFV ESLIVTLSPR BACU002125/1-1316 RVISELQEAC WDMVSAMAGD IILLLDSDND GIRTHAIKFV ESLIVTLSPR 251 300 ENSTTRP00000013565/1-1275 MADSEVPRRQ EHDISLDRIP RDHPYIQYNV LWEEGKAALE QLLKFMVHPA ENSP00000245934/1-1274 MADSEIPRRQ EHDISLDRIP RDHPYIQYNV LWEEGKAALE QLLKFMVHPA ENSBTAP00000016048/1-1272 MADSEVPRRQ EHDISLDRIP RDHPYIQYNV LWEEGKAALE QLLKFMVHPA bmy_06573T0/1-1288 MADSEVPRRQ EHDISLDRIP RDHPYIQYNV LWEEGKAALE QLLKFMVHPA BACU002125/1-1316 MADSEVPRRQ EHDISLDRIP RDHPYIQYNV LWEEGKAALE QLLKFMVHPA 301 350 ENSTTRP00000013565/1-1275 ISSINLTTAL GSLANIARQR PMFMSEVIQA YETLHANLPP TLAKSQVSSV ENSP00000245934/1-1274 ISSINLTTAL GSLANIARQR PMFMSEVIQA YETLHANLPP TLAKSQVSSV ENSBTAP00000016048/1-1272 ISSINLTTAL GSLANIARQR PMFMSEVIQA YETLHANLPP TLAKSQVSSV bmy_06573T0/1-1288 ISSINLTTAL GSLANIARQR PMFMSEVIQA YETLHANLPP TLAKSQVSSV BACU002125/1-1316 ISSINLTTAL GSLANIARQR PMFMSEVIQA YETLHANLPP TLAKSQVSSV 351 400 ENSTTRP00000013565/1-1275 RKNLKLHLLS VLKHPASLEF QAQITTLLVD LGTPQAEIAR NMPSGKDARK ENSP00000245934/1-1274 RKNLKLHLLS VLKHPASLEF QAQITTLLVD LGTPQAEIAR NMPSSKDTRK ENSBTAP00000016048/1-1272 RKNLKLHLLN VLKHPASLEF QAQITTLLVD LGTPQVEIAR NMPSGKDARK bmy_06573T0/1-1288 RKNLKLHLLS VLKHQASLEF QAQITTLLVD LGTPQAEIAR NMPSGKDARK BACU002125/1-1316 RKNLKLHLLS VLKHQASLEF QAQITTLLVD LGTPQAEIAR NMPSGKDARK 401 450 ENSTTRP00000013565/1-1275 RPRDDSDSTL KKMKLEPNLG EDDEDKDLEP GPSATSKASA QISGQSDTDI ENSP00000245934/1-1274 RPRDDSDSTL KKMKLEPNLG EDDEDKDLEP GPSGTSKASA QISGQSDTDI ENSBTAP00000016048/1-1272 RPRDDSDSTL KKMKLEPNLG EDDEDKDLEP GPSGTSKASA QISGQSDTDI bmy_06573T0/1-1288 RPRDDSDSTL KKMKLEPNLG EDDEDKDLEP GPSATSKASA QISGQSDTDI BACU002125/1-1316 RPRDDSDSTL KKMKLEPNLG EDDEDKDLEP GPSATSKASA QISGQSDTDI 451 500 ENSTTRP00000013565/1-1275 TAEFLQPLLT PDNVANLVLI SMVYLPEAMP ASFQAIYTPV ESAGTEAQIK ENSP00000245934/1-1274 TAEFLQPLLT PDNVANLVLI SMVYLPEAMP ASFQAIYTPV ESAGTEAQIK ENSBTAP00000016048/1-1272 TAEFLQPLLT PDNVANLVLI SMVYLPEAMP ASFQAIYTPV ESAGTEAQIK bmy_06573T0/1-1288 TAEFLQPLLT PDNVANLVLI SMVYLPEAMP ASFQAIYTPV ESAGTEAQIK BACU002125/1-1316 TAEFLQPLLT PDNVANLVLI SMVYLPEAMP ASFQAIYTPV ESAGTEAQIK 501 550 ENSTTRP00000013565/1-1275 HLARLMATQM TAAGLGPGVE QTKQCKEEPK EEKVVKPESV LIKRRLSAQG ENSP00000245934/1-1274 HLARLMATQM TAAGLGPGVE QTKQCKEEPK EEKVVKTESV LIKRRLSAQG ENSBTAP00000016048/1-1272 HLARLMATQM TAAGLGPGVE QTKQCKEEPK EEKVVKPESV LIKRRLPAQG bmy_06573T0/1-1288 HLARLMATQM TAAGLGPGVE QTKQCKEEPK EEKVVKPESV LIKRRLSAQG BACU002125/1-1316 HLARLMATQM TAAGLGPGVE QTKQCKEEPK EEKVVKPESV LIKRRLSAQG 551 600 ENSTTRP00000013565/1-1275 QAISVVGSLS SMSTLEEEAP QAKRRPEPII PVTQPRLAGA GGRKKIFRLS ENSP00000245934/1-1274 QAISVVGSLS SMSPLEEEAP QAKRRPEPII PVTQPRLAGA GGRKKIFRLS ENSBTAP00000016048/1-1272 QAISVVGSLS SMSSLEEEAP QAKRRPEPII PVTQPRLAGA GGRKKIFRLS bmy_06573T0/1-1288 QAISVVGSLS SMSTLEEEAP QAKRRPEPII PVTQPRLAGA GGRKKIFRLS BACU002125/1-1316 QAISVVGSLS SMSTLEEEAP QAKRRPEPII PVTQPRLAGA GGRKKIFRLS 601 650 ENSTTRP00000013565/1-1275 DVLKPLTDAQ VEAMKLGAVK RILRAEKAVA CSGAAQVRIK ILASLVNQFE ENSP00000245934/1-1274 DVLKPLTDAQ VEAMKLGAVK RILRAEKAVA CSGAAQVRIK ILASLVTQFN ENSBTAP00000016048/1-1272 DVLKPLTDAQ VEAMKLGAVK RILRAEKAVA CSGAAQVRIK ILASLVTQFD bmy_06573T0/1-1288 DVLKPLTDAQ VEAMKLGAVK RILRAEKAVA CSGAAQVRIK ILASLVTQFD BACU002125/1-1316 DVLKPLTDAQ VEAMKLGAVK RILRAEKAVA CSGAAQVRIK ILASLVTQFD 651 700 ENSTTRP00000013565/1-1275 SGLKAEVLSF ILKNVRARLD LAFAWLYQEY NTYLAAGAAG TLDKYEDCII ENSP00000245934/1-1274 SGLKAEVLSF ILEDVRARLD LAFAWLYQEY NAYLAAGASG SLDKYEDCLI ENSBTAP00000016048/1-1272 SGLKAEVLSF ILEDVRARLD LAFAWLYQEY NAYLAAGVKG ALDKYEDCLI bmy_06573T0/1-1288 SGLKAEVLSF ILEDVRARLD LAFAWLYQEY NAYLAAGAAG TLDKYEDCLI BACU002125/1-1316 SGLKAEVLSF ILEDVRARLD LAFAWLYQEY NAYLAAGAAG TLDKYEDCLI 701 750 ENSTTRP00000013565/1-1275 RMLSDLQEKP DQKDEIFTKV VLEAPLITES ALEVIRKYCE DESRTYLGMS ENSP00000245934/1-1274 RLLSGLQEKP DQKDGIFTKV VLEAPLITES ALEVVRKYCE DESRTYLGMS ENSBTAP00000016048/1-1272 RLLSGLQEKP DQKDGIFTKV VLEAPLITES ALEVIRKYCE DESRTYLGMS bmy_06573T0/1-1288 RLLSGIQEKP DQKDGIFTKV VLEAPLITES ALEVIRKYCE DESRTYLGMS BACU002125/1-1316 RLLSGIQEKP DQKDGIFTKV VLEAPLITES ALEVIRKYCE DESRTYLGMS 751 800 ENSTTRP00000013565/1-1275 TLRDLIFKRP SRQFQYLHVL LDLSSHEKDK VRSQALLFIK RMYEKEQLRE ENSP00000245934/1-1274 TLRDLIFKRP SRQFQYLHVL LDLSSHEKDK VRSQALLFIK RMYEKEQLRE ENSBTAP00000016048/1-1272 TLRDLIFKRP SRQFQYLHVL LDLSSHEKDK VRSQALLFIK RMYEKEQLRE bmy_06573T0/1-1288 TLRDLIFKRP SRQFQYLHVL LDLSSHEKDK VRSQALLFIK RMYEKEQLRE BACU002125/1-1316 TLRDLIFKRP SRQFQYLHVL LDLSSHEKDK VRSQALLFIK RMYEKEQLRE 801 850 ENSTTRP00000013565/1-1275 YVEKFALNYL QLLVHPNPPS VLFGADKDTX XXXXXXXXXX XXXXXXXXXX ENSP00000245934/1-1274 YVEKFALNYL QLLVHPNPPS VLFGADKDTE VAAPWTEETV KQCLYLYLAL ENSBTAP00000016048/1-1272 YVEKFALNYL QLLVHPNPPS VLFGADKDTE VAAPWTEETV KQCLYLYLAL bmy_06573T0/1-1288 TWQ------- ---------- ------VEQE VAAPWTEETV KQCLYLYLAL BACU002125/1-1316 YVEKFALNYL QLLVHPNPPS VLFGADKDTE VAAPWTEETV KQCLYLYLAL 851 900 ENSTTRP00000013565/1-1275 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXIRGMGMN SPELLLLVEN ENSP00000245934/1-1274 LPQNHKLIHE LAAVYTEAIA DIKRTVLRVI EQPIRGMGMN SPELLLLVEN ENSBTAP00000016048/1-1272 LPQNHKLIHE LAAVYTEAIA DIKRTVLRVI EQPIRGMGMN SPELLLLVEN bmy_06573T0/1-1288 LPQNHKLIHE LAAVYTEAIA DIKRTVLRVI EQPIRGMGMN SPELLLLVEN BACU002125/1-1316 LPQNHKLIHE LAAVYTEAIA DIKRTVLRVI EQPIRGMGMN SPELLLLVEN 901 950 ENSTTRP00000013565/1-1275 CPKGAETLVT RCLHSLTDKV PPSPELVKRV RDLYHKRLPD VRFLIPVLNG ENSP00000245934/1-1274 CPKGAETLVT RCLHSLTDKV PPSPELVKRV RDLYHKRLPD VRFLIPVLNG ENSBTAP00000016048/1-1272 CPKGAETLVT RCLHSLTDKV PPSPELVKRV RDLYHKRLPD VRFLIPVLNG bmy_06573T0/1-1288 CPKGAETLVT RCLHSLTDKV PPSPELVKRV RDLYHKRLPD VRFLIPVLNG BACU002125/1-1316 CPKGAETLVT RCLHSLTDKV PPSPELVKRV RDLYHKRLPD VRFLIPVLNG 951 1000 ENSTTRP00000013565/1-1275 LEKXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXI ENSP00000245934/1-1274 LEKKEVIQAL PKLIKLNPIV VKEVFNRLLG TQHGEGNSAL SPLNPGELLI ENSBTAP00000016048/1-1272 LEKKEVIQAL PKLIKLNPIV VKEVFNRLLG TQHGEGNSAL SPLNPGELLI bmy_06573T0/1-1288 LEKKEVIQAL PKLIKLNPIV VKEVFNRLLG TQHGEGNSAL SPLNPGELLI BACU002125/1-1316 LEKKEVIQAL PKLIKLNPIV VKEVFNRLLG TQHGEGNSAL SPLNPGELLI 1001 1050 ENSTTRP00000013565/1-1275 ALHNIDSSKC DMKSIIKATN LCFAERNVYT SEVLAVVMQQ LMEQSPLPML ENSP00000245934/1-1274 ALHNIDSVKC DMKSIIKATN LCFAERNVYT SEVLAVVMQQ LMEQSPLPML ENSBTAP00000016048/1-1272 ALHNIDSAKC DMKSIIKATN LCFAERNVYT SEVLAVVMQQ LMEQSPLPML bmy_06573T0/1-1288 ALHNIDSSKC DMKSIIKATN LCFAERNVYT SEVLAVVMQQ LMEQSPLPML BACU002125/1-1316 ALHNIDSSKC DMKSIIKATN LCFAERNVYT SEVLAVVMQQ LMEQSPLPML 1051 1100 ENSTTRP00000013565/1-1275 LMRTVIQSLT MYPRLGGFVM NILSRLIMKQ VWKYPKVWEG FIKCCQRTKP ENSP00000245934/1-1274 LMRTVIQSLT MYPRLGGFVM NILSRLIMKQ VWKYPKVWEG FIKCCQRTKP ENSBTAP00000016048/1-1272 LMRTVIQSLT MYPRLGGFVM NILSRLIMKQ VWKYPKVWEG FIKCCQRTKP bmy_06573T0/1-1288 LMRTVIQSLT MYPRLGGFVM NILSRLIMKQ VWKYPKVWEG FIKCCQRTKP BACU002125/1-1316 LMRTVIQSLT MYPRLGGFVM NILSRLIMKQ VWKYPKVWEG FIKCCQRTKP 1101 1150 ENSTTRP00000013565/1-1275 QSFQVILQLP PQQLGAVFDK CPELREPLLA HVRSFTPHQQ AHIPNSIMTI ENSP00000245934/1-1274 QSFQVILQLP PQQLGAVFDK CPELREPLLA HVRSFTPHQQ AHIPNSIMTI ENSBTAP00000016048/1-1272 QSFQVILQLP PQQLGAVFDK CPELREPLLA HVRSFTPHQQ AHIPNSIMAI bmy_06573T0/1-1288 QSFQVILQLP PQQLGAVFDK CPELREPLLA HVRSFTPHQQ AHIPNSIMTI BACU002125/1-1316 QSFQVILQLP PQQLGAVFDK CPELREPLLA HVRSFTPHQQ AHIPNSIMTI 1151 1200 ENSTTRP00000013565/1-1275 LEASGKQEPE TKEAPAGPLE EDDLEPLALA PPPAPRPPQD LIGLRLAQEK ENSP00000245934/1-1274 LEASGKQEPE AKEAPAGPLE EDDLEPLTLA PAPAPRPPQD LIGLRLAQEK ENSBTAP00000016048/1-1272 LEASGKQEPE TKEAPAGPLE EDDLEPLALA PPPAPRPPQD LIGLRLAQEK bmy_06573T0/1-1288 LEASGKQEPE TKEAPAGPLE EDDLEPLALA PPPAPRPPQD LIGLRLAQEK BACU002125/1-1316 LEASGKQEPE TKEAPAGPLE EDDLEPLALA PPPAPRPPQN LIGLRLAQEK 1201 1250 ENSTTRP00000013565/1-1275 ALKRQLEEEQ KLKPGGVGAP SSSSSSLSSS SARPGPPQPE EAIDFREEGP ENSP00000245934/1-1274 ALKRQLEEEQ KLKPGGVGAP SSSSPS-PSP SARPGPPPSE EAMDFREEGP ENSBTAP00000016048/1-1272 ALKRQLEEEQ KLKPGGLGGP SSSS---SSS SARPGPPQPE EAIDFREEGP bmy_06573T0/1-1288 ALKRQLEEEQ KLKPGGVGAP SSSSSSLSSS SARPGPSQPE EAIDFREEGP BACU002125/1-1316 ALKRQLEEEQ KLKPGGVGAP SSSSSSLSSS SARPGPPQLE EAIDFREEGP 1251 1300 ENSTTRP00000013565/1-1275 ECETPAIFIS MDDDSGLTEA ALLDSSLEGP LPKEAAAGGL ISKEERSPQT ENSP00000245934/1-1274 ECETPGIFIS MDDDSGLTEA ALLDSSLEGP LPKETAAGGL TLKEERSPQT ENSBTAP00000016048/1-1272 ECETPAIFIS MDDDSGLTEA ALLDSSLEGP LPKETAAGGL LSKEERSPQP bmy_06573T0/1-1288 ECETPAIFIS MDDDSGLTEA ALLDSSLEGP LPKEAAAGGL ISKEERSPQT BACU002125/1-1316 ECETPAIFIS MDDDSGLAEA ALLDSSLEGP LPKEAAAGGL ISKE--XPQT 1301 1350 ENSTTRP00000013565/1-1275 LTLAGEDTVK TPSPTAEEAG EPETKGNS ENSP00000245934/1-1274 LAPVGEDAMK TPSPAAEDAR EPEAKGNS ENSBTAP00000016048/1-1272 LTAAGEDTVQ TPSPATEEVG EPETKGNS bmy_06573T0/1-1288 LTPAGEDTVK TPSPTAEEAG EPETKGNS BACU002125/1-1316 LTPAGEDTVK TPSPTAEEAG EPETKGNS