KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:08 2014 Check: 00 .. Name: bmy_03476T0/1-435 Len: 529 Check: 2788 Weight: 1.00 Name: ENSBTAP00000016066/1-523 Len: 529 Check: 472 Weight: 1.00 Name: ENSP00000238561/1-523 Len: 529 Check: 7268 Weight: 1.00 Name: BACU010852/1-523 Len: 529 Check: 9664 Weight: 1.00 Name: ENSTTRP00000008852/1-529 Len: 529 Check: 6051 Weight: 1.00 // 1 50 bmy_03476T0/1-435 ---------- ---MALAASG FYLYSNKYLD LNDFGAVRVG RAVATTAVIS ENSBTAP00000016066/1-523 MARRALKLAS WTSVALAASG ICLYSNKYLD PNDFGAVRVG RAVATTAVIS ENSP00000238561/1-523 MARKALKLAS WTSMALAASG IYFYSNKYLD PNDFGAVRVG RAVATTAVIS BACU010852/1-523 MARRALKLAS WTSMALAASG FYLYSNKYLD LNDFGAVRVG RAVATTAVIS ENSTTRP00000008852/1-529 MARRALKLAS WTSMALAASG VYLYSNKYLD LNDFGAVRVG RAVATTAAIS 51 100 bmy_03476T0/1-435 YDYLTSLRSV PYGSEEYLQL RSK------V HLRSARRLCE LCCANRGTFI ENSBTAP00000016066/1-523 YDYLTSLRSV PYGSEEYLQL RSK------V HLRSARRLCE LCCANRGTFI ENSP00000238561/1-523 YDYLTSLKSV PYGSEEYLQL RSK------V HLRSARRLCE LCCANRGTFI BACU010852/1-523 YDYLTSLRSV PYGSEEYLQL RSK------V HLRSARRLCE LCCANRGTFI ENSTTRP00000008852/1-529 YDYLTSLRSV PYGSEEYLQL RSKPPVFLQV HLRSARRLCE LCCANRGTFI 101 150 bmy_03476T0/1-435 KVGQHLGALD YLLPEEYTST LKVLHSQAPQ SSMQEVRQVI QEDLGKEIHD ENSBTAP00000016066/1-523 KVGQHLGALD YLLPEEYTST LKVLHSQAPQ SSMKEVRQVI REDLGKEIHD ENSP00000238561/1-523 KVGQHLGALD YLLPEEYTST LKVLHSQAPQ SSMQEIRQVI REDLGKEIHD BACU010852/1-523 KVGQHLGALD YLLPEEYTRT LKVLHSQAPQ SSMQEVRQVI REDLGKEIHD ENSTTRP00000008852/1-529 KVGQHLGALD YLLPEEYTST LKVLHSQAPQ SSMQEVRQVI REDLGKEIHD 151 200 bmy_03476T0/1-435 LFMSFDDTPL GAASLAQVHK AVLHDGRTVA VKVQHPKVQA QSSKDILLME ENSBTAP00000016066/1-523 LFLSFDDTPL GAASLAQVHK AVLRDGRTVA VKVQHPKVQA QSSKDILLME ENSP00000238561/1-523 LFQSFDDTPL GTASLAQVHK AVLHDGRTVA VKVQHPKVRA QSSKDILLME BACU010852/1-523 LFMSFDDTPL GAASLAQVHK AVLHDGRTVA VKVQHPKVQA QSSKDILLME ENSTTRP00000008852/1-529 LFMSFDDTPL GAASLAQVHK AVLHDGRTVA VKVQHPKVQA QSSKDILLME 201 250 bmy_03476T0/1-435 VLVLAVKQLF PEFEFMWLVD EAKKNLPLEL DFLNEGRNAE KVAQMLKHFD ENSBTAP00000016066/1-523 VLVLAVKQLF PEFEFMWLVD EAKKNLPLEL DFLNEGRNAE KVAQMLKHFD ENSP00000238561/1-523 VLVLAVKQLF PEFEFMWLVD EAKKNLPLEL DFLNEGRNAE KVSQMLRHFD BACU010852/1-523 VLVLAVKQLF PEFEFMWLVD EAKKNLPLEL DFLNEGRNAE KVAQMLKHFD ENSTTRP00000008852/1-529 VLVLAVKQLF PEFEFMWLVD EAKKNLPLEL DFLNEGRNAE KVAQMLKHFD 251 300 bmy_03476T0/1-435 FLKVPQIYWE LSTKRVLLME FVDGGQVNDR DYMERNKIDV NEISRHLGKM ENSBTAP00000016066/1-523 FLKVPHIYWE LSTKRVLLME FVDGGQVNDR HYMERNKIDI NEISRHLGRM ENSP00000238561/1-523 FLKVPRIHWD LSTERVLLME FVDGGQVNDR DYMERNKIDV NEISRHLGKM BACU010852/1-523 FLKVPQIYWE LSTKRVLLME FVDGGQVNDR DYMARNKIDV NEISRHLGKM ENSTTRP00000008852/1-529 FLKVPQIYWE LSTKRVLLME FVDGGQVNDR DYMERXXXXX XXISRHLGKM 301 350 bmy_03476T0/1-435 YSEMIFVNGF VHCDPHPGNV LVRKCPGTGK AEIVLLDHGL YQVLTEEFRL ENSBTAP00000016066/1-523 YSEMIFVNGF VHCDPHPGNV LVRKRPDTGK VEIVLLDHGL YQALTEEFRL ENSP00000238561/1-523 YSEMIFVNGF VHCDPHPGNV LVRKHPGTGK AEIVLLDHGL YQMLTEEFRL BACU010852/1-523 YSEMIFVNGF VHCDPHPGNV LVRKCPGTGK AEIVLLDHGL YQVLTEEFRL ENSTTRP00000008852/1-529 YSEMIFVNGF VHCDPHPGNV LVRKCPGTGK VEIVLLDHGL YQVLTEEFRL 351 400 bmy_03476T0/1-435 DYCHLWQSLI WTDMKSVKKY SQRLGAGDLY PLFTCMLTAR SWDSVNRGIG ENSBTAP00000016066/1-523 DYCRLWQSLI WTDMQSVRKY SQRLGAGDLY PLFACMLTAR SWDSVNKGIG ENSP00000238561/1-523 NYCHLWQSLI WTDMKRVKEY SQRLGAGDLY PLFACMLTAR SWDSVNRGIS BACU010852/1-523 DYCHLWQSLI WTDMKSVKKY SQRLGAGDLY PLFTCMLTAR SWDSVNKGIG ENSTTRP00000008852/1-529 DYCHLWQSLI WTDMKSVKKY SQRLGAGDLY PLFTCMLTAR SWDSVNRGIG 401 450 bmy_03476T0/1-435 QTPVTATET- ---------- ---------- ---------- ----RKWNRT ENSBTAP00000016066/1-523 QTPVTTTEDS EIRNHAANYL PQISQLLNRV PRQMLLIFKT NDLLRGIEAA ENSP00000238561/1-523 QAPVTATEDL EIRNNAANYL PQISHLLNHV PRQMLLILKT NDLLRGIEAA BACU010852/1-523 QTPVTATEDS EIRNNAANYL PQISHLLNLV PRQMLLIFKT NDLLRGIEAA ENSTTRP00000008852/1-529 QTPVTATEDS EIRNNAANYL PQISHLLNLV PRQMLLIFKT NDLLRGIEAA 451 500 bmy_03476T0/1-435 LGKEASRR-- LTAADWPVQR LCGHPARPPP AV-------- ---------- ENSBTAP00000016066/1-523 LGTRASASSF LNMSRCCIKA LAAHKKQKTR SLFRRAQISL REAVSLWKIN ENSP00000238561/1-523 LGTRASASSF LNMSRCCIRA LAEHKKKNTC SFFRRTQISF SEAFNLWQIN BACU010852/1-523 LGTRASASSF LNMSRCCIKA LAAHKKKNTH SFFRRTQISF SEAFNLWQIN ENSTTRP00000008852/1-529 LGTRASATSF LNMSRCCVKA LAAHKKKNTH SFFRRTQISF SEAFNLWQIN 501 550 bmy_03476T0/1-435 ---------- --MAGELSAL L-------- ENSBTAP00000016066/1-523 LQELVLHLKG LRLTGWVWAL LCWLLPASH ENSP00000238561/1-523 LHELILRVKG LKLADRVLAL ICWLFPAPL BACU010852/1-523 LHELVLRVKG LRLASWVLAL LCWLLPAPH ENSTTRP00000008852/1-529 LHELVLRVKG LRLASWVSAL LCWLLPAPH