KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:13 2014 Check: 00 .. Name: ENSP00000377040/1-926 Len: 926 Check: 7716 Weight: 1.00 Name: bmy_17516T0/1-653 Len: 926 Check: 6029 Weight: 1.00 Name: ENSBTAP00000016090/1-926 Len: 926 Check: 1057 Weight: 1.00 Name: BACU006845/1-925 Len: 926 Check: 1401 Weight: 1.00 Name: ENSTTRP00000001678/1-925 Len: 926 Check: 3234 Weight: 1.00 // 1 50 ENSP00000377040/1-926 MLQVHRTGLG RLGVSLSKGL HHKAVLAVRR EDVNAWERRA PLAPKHIKGI bmy_17516T0/1-653 ---------- ---------- -------MTS EEVE--QTPP PQGP-HPNFC ENSBTAP00000016090/1-926 MLRVSRTKLG RLSPSLSRGL HHKAVMALRR EDVNAWERRA PLAPRHVKGI BACU006845/1-925 MLRVPRTKLG RLGLNLSR-L HYKAVMALRR EDVNAWERRA PLAPRHIKGI ENSTTRP00000001678/1-925 MLRVPRTKLG RLGLSLSR-L HYKAVMALRR EDVNAWERRA PLAPRHIKGI 51 100 ENSP00000377040/1-926 TNLGYKVLIQ PSNRRAIHDK DYVKAGGILQ EDISEACLIL GVKRPPEEKL bmy_17516T0/1-653 WEFG-SYSAR TGERRGGGDR ---------- ---------- --TRPPEEKL ENSBTAP00000016090/1-926 TNLGYKVLIQ PSNRRAIHDK EYVKAGGILQ EDISEACLIL GVKRPPEEKL BACU006845/1-925 TNLGYKVLIQ PSNRRAIHDK EYVKAGGILQ EDISEACLIL GVKRPPEERL ENSTTRP00000001678/1-925 TNLGYKVLIQ PSNRRAIHDK EYVKAGGILQ EDISEACLIL GVKRPPEEKL 101 150 ENSP00000377040/1-926 MSRKTYAFFS HTIKAQEANM GLLDEILKQE IRLIDYEKMV DHRGVRVVAF bmy_17516T0/1-653 MPKKTYAFFS HTIKAQEANM GLLDEILKQE IRLIDYEKMV DHRGIRVVAF ENSBTAP00000016090/1-926 MPKKTYAFFS HTIKAQEANM GLLDEILKQE IRLIDYEKMV DHRGIRVVAF BACU006845/1-925 MPKKTYAFFS HTIKAQEANM GLLDEILKQE IRLIDYEKMV DHRGIRVVAF ENSTTRP00000001678/1-925 MPKKTYAFFS HTIKAQEANM GLLDEILKQE IRLIDYEKMV DHRGIRVVAF 151 200 ENSP00000377040/1-926 GQWAGVAGMI NILHGMGLRL LALGHHTPFM HIGMAHNYRN SSQAVQAVRD bmy_17516T0/1-653 GQWAGVA--- ---------- ---------- ---------- ---------- ENSBTAP00000016090/1-926 GQWAGVAGII NILHGMGLRL LALGHHTPFM HIGMAHNYRN SSQAVQAVRD BACU006845/1-925 GQWAGVAGMI NILHGMGLRL LALGHHTPFM HIGMAHNYRN SSQAVQAVRD ENSTTRP00000001678/1-925 GQWAGVAGMI NILHGMGLRL LALGHHTPFM HIGMAHNYRN SSQAVQAVRD 201 250 ENSP00000377040/1-926 AGYEISLGLM PKSIGPLTFV FTGTGNVSKG AQAIFNELPC EYVEPHELKE bmy_17516T0/1-653 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016090/1-926 AGYEIFKGLM PKSIGPLTFV FTGTGNVSKG AQEIFNELPC EYVEPHELKE BACU006845/1-925 AGYEISLGLM PKSIGPLTFV FTGTGNVSKG AQEIFNELPC EYVEPHELKE ENSTTRP00000001678/1-925 TGYEISLGLM PKSIGPLTFV FTGTGNVSKG AQEIFNELPC EYVEPHELKE 251 300 ENSP00000377040/1-926 VSQTGDLRKV YGTVLSRHHH LVRKTDAVYD PAEYDKHPER YISRFNTDIA bmy_17516T0/1-653 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016090/1-926 VSQNGDLRKV YGTVLSRHHH LVRKTDGVYD PVEYDKYPER YISRFNTDIA BACU006845/1-925 VSQNGDLRKV YGTVLSRHHH LVRKTDGIYD PVEYDKYPER YISRFNTDIA ENSTTRP00000001678/1-925 VSQNGDLRKV YGTVLSRHHH LVRKTDGIYD PVEYDKYPER YISRFNTDIA 301 350 ENSP00000377040/1-926 PYTTCLINGI YWEQNTPRLL TRQDAQSLLA PGKFSPAGVE GCPALPHKLV bmy_17516T0/1-653 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016090/1-926 PYTTCLINGI YWEQNTPRLL TRQDAQSLLA PGKSPVAGVE GCPALPHKLV BACU006845/1-925 PYTTCLINGI YWEQNTPRLL TRQDAQSLLA PGKSSAAGVE GCPALPHKLV ENSTTRP00000001678/1-925 PYTTCLINGI YWEQNTPRLL TRQDAQSLLA PGKSSVAGVE GCPALPHKLV 351 400 ENSP00000377040/1-926 AICDISADTG GSIEFMTECT TIEHPFCMYD ADQHIIHDSV EGSGILMCSI bmy_17516T0/1-653 ------ADTG GSIEFMTECT TIEHPFCMYD ADQHIIHDSV EGSGILMCSI ENSBTAP00000016090/1-926 AICDISADTG GSIEFMTECT TIERPFCMYD ADQHIIHDSV EGSGILMCSI BACU006845/1-925 AICDISADTG GSIEFMTECT TIEHPFCMYD ADQHIIHDSV EGSGILMCSI ENSTTRP00000001678/1-925 AICDISADTG GSIEFMTECT TIEHPFCMYD ADQHIIHDSV EGSGILMCSI 401 450 ENSP00000377040/1-926 DNLPAQLPIE ATECFGDMLY PYVEEMILSD ATQPLESQNF SPVVRDAVIT bmy_17516T0/1-653 DNLPAQLPIE STEYFGDMLY PYVEEMILSD ATQPLESQNF SPVVRDAVIT ENSBTAP00000016090/1-926 DNLPAQLPIE STEYFGDMLY PYVEEMILSD ATQPLESQNF SPVVRDAVIA BACU006845/1-925 DNLPAQLPIE STEYFGDMLY PYVEEMILSD ATQPLESQNF SPVVRDAVIT ENSTTRP00000001678/1-925 DNLPAQLPIE STEYFGDMLY PYVEEMILSD ATQPLESQNF SPVVRDAVIT 451 500 ENSP00000377040/1-926 SNGTLPDKYK YIQTLRESRE RAQSLSMGTR RKVLVLGSGY ISEPVLEYLS bmy_17516T0/1-653 SNGTLSNKYK YIQKLRESRE RVQSLSVGTK KKVLVLGSGY VSEPVLEYLS ENSBTAP00000016090/1-926 SNGMLSNKYK YIQKLRENRE HAQSLSMGTK KKVLVLGSGY VSEPVLEYLL BACU006845/1-925 SNGTLSNKYK YIQKLRESRE RVQSLSVGTK KKVLVLGSGY VSEPVLEYLS ENSTTRP00000001678/1-925 SNGTLSNKYK YIQKLRESRE RVQSLSASTK KKVLVLGSGY VSEPVLEYLS 501 550 ENSP00000377040/1-926 RDGNIEITVG SDMKNQIEQL GKKYNINPVS MDICKQEEKL GFLVAKQDLV bmy_17516T0/1-653 RDDNIEITVG SDMKNQIEQL GKKYNINPVS L--------- ---------- ENSBTAP00000016090/1-926 RDDSIEITVG SDMKNQIEQL GKKYNINPVS LHVGKQEEKL SSLVATQDLV BACU006845/1-925 RDDNIEITVG SDMKNQIEQL GKKYNINPVN LYVGKQEVKL SSLVATQDLV ENSTTRP00000001678/1-925 RDDNIEITVG SDMENQIEQL GKKYNINPVS LYVGKQEVKL NSLVATQDLV 551 600 ENSP00000377040/1-926 ISLLPYVLHP LVAKACITNK VNMVTASYIT PALKELEKSV EDAGITIIGE bmy_17516T0/1-653 --LLPYVLHP LVAKACIASK VNMITASYIT PVLKELEKSV EDAGITIIGE ENSBTAP00000016090/1-926 ISLLPYVLHP LVAKACIASK VNMITASYIT PALKELEKSV EDAGITVIGE BACU006845/1-925 ISLLPYVLHP LVAKACIASK VNMITASYIT PVLKELEKSV EDAGITIIGE ENSTTRP00000001678/1-925 ISLLPYVLHP LVAKACIASK VNMITASYIT PVLKELEKSV EDAGITVIGE 601 650 ENSP00000377040/1-926 LGLDPGLDHM LAMETIDKAK EVGATIESYI SYCGGLPAPE HSNNPLRYKF bmy_17516T0/1-653 LGLDPGLDHM LAMETIDKAK EVGATIESYV SYCGGLPAPE HSDNPLRYKF ENSBTAP00000016090/1-926 LGLDPGLDHM LAMETIDKAK EVGATIESYV SYCGGLPAPE CSDNPLRYKF BACU006845/1-925 LGLDPGLDHM LAMETIDKAK EVGATIESYV SYCGGLPAPE HSDNPLRYKF ENSTTRP00000001678/1-925 LGLDPGLDHM LAMETIDKAK EVGATIESYV SYCGGLPAPE HSDNPLRYKF 651 700 ENSP00000377040/1-926 SWSPVGVLMN VMQSATYLLD GKVVNVAGGI SFLDAVTSMD FFPGLNLEGY bmy_17516T0/1-653 SWSPVGVLMN IMQPATYLLN GKVVNVVGGV SFLDSVTPMD YFPGLNLESY ENSBTAP00000016090/1-926 SWSPVGVLMN IMQPATYLLN GKVVNAVGGV SFLDSVTPMD YFPGLNLEGY BACU006845/1-925 SWSPVGVLMN IMQPATYLLN GKVVNVVGGV SFLDSVTPMD YFPGLNLESY ENSTTRP00000001678/1-925 SWSPVGVLMN IMQPATYLLN GKVVNVVGGV SFLDSVTPMD YFPGLNLESY 701 750 ENSP00000377040/1-926 PNRDSTKYAE IYGISSAHTL LRGTLRYKGY MKALNGFVKL GLINREALPA bmy_17516T0/1-653 PNRDSTKYAE IYGIPFAHTL LRGTLRYKGY AKALNGFVKL GLINRDAFPA ENSBTAP00000016090/1-926 PNRDSTKYAE IYGIPSAHTL LRGTLRYKGY AKALSGFVKL GLINRDAFPA BACU006845/1-925 PNRDSTKYAE IYGIPSAHTL LRGTLRYKGH AKALNGFVKL GLINRDAFPA ENSTTRP00000001678/1-925 PNRDSTKYAE IYGIPSAHTL LRGTLRYRGY AKALNGFVKL GLINRDAFPA 751 800 ENSP00000377040/1-926 FRPEANPLTW KQLLCDLVGI SPSSEHDVLK EAVLKKLGGD NTQLEAAEWL bmy_17516T0/1-653 LRPDANPLTW KELLCDLVGI SSSSKCDVLK EAVFKKLEGD NTQLEAVEWL ENSBTAP00000016090/1-926 LQPDANPLTW KELLCDLVGI SSSSKCDVLK EAVFKKLGGD TTQLEALEWL BACU006845/1-925 LRPDANPLSW KELLCDLVGI SSSSKCDVLK EAVFKKLEGD NTQLEAVEWL ENSTTRP00000001678/1-925 LRPDANPLTW KELLCDLVGI SPSSKCDVLK EAVFKKLEGD NTQLEAVEWL 801 850 ENSP00000377040/1-926 GLLGDEQVPQ AESILDALSK HLVMKLSYGP EEKDMIVMRD SFGIRHPSGH bmy_17516T0/1-653 GLLGDEQVPR AESLVDALSK HLAMKLSYGP GEKDMIVMRD NFGIRHPSGH ENSBTAP00000016090/1-926 GLLGDEQVPQ AESLVDALSK HLAVKLSYGP GEKDMIVMRD SFGIRHPSGH BACU006845/1-925 GLLGDEQVPQ AESLVDALSK HLAVKLSYGP GEKDMIVMRD NFGIRHPSGH ENSTTRP00000001678/1-925 GLLGDEQVPR AESLVDALSK HLAMKLSYGP GEKDMIVMRD NFGIRHPSGH 851 900 ENSP00000377040/1-926 LEHKTIDLVA YGDINGFSAM AKTVGLPTAM AAKMLLDGEI GAKGLMGPFS bmy_17516T0/1-653 LENKTIDLVV YGDVNGFSAM AKTVGLPTAM AAKMLLDGEI QAKGLMGPFS ENSBTAP00000016090/1-926 LENKTIDLVV YGDVNGFSAM AKTVGLPTAM AAKMLLDGEI QAKGLMGPFS BACU006845/1-925 LENKTIDLVV YGDVNGFSAM AKTVGLPTAM AAKMLLDGEI QAKGLMGPFS ENSTTRP00000001678/1-925 LENKTIDLVV YGDVNGFSAM AKTVGLPTAM AAKMLLDGEI QAKGLMGPFS 901 950 ENSP00000377040/1-926 KEIYGPILER IKAEGIIYTT QSTIKP bmy_17516T0/1-653 KEIYGPILER IKAEGIMYTT QSTIKP ENSBTAP00000016090/1-926 KEIYGPILER IKAEGIMYTT QSTIKL BACU006845/1-925 KEIYGPILER IKAEGIMYTT QSTITP ENSTTRP00000001678/1-925 KEIYGPILER IKAEGIMYTT QSTIKP