KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:16 2014 Check: 00 .. Name: ENSP00000311360/1-391 Len: 458 Check: 1077 Weight: 1.00 Name: ENSBTAP00000016108/1-422 Len: 458 Check: 6101 Weight: 1.00 Name: ENSTTRP00000012537/1-390 Len: 458 Check: 6685 Weight: 1.00 Name: bmy_07829T0/1-416 Len: 458 Check: 9937 Weight: 1.00 Name: BACU020056/1-390 Len: 458 Check: 7329 Weight: 1.00 // 1 50 ENSP00000311360/1-391 ---------- ---------- ---------- ------MKCL VTGGNVKVLG ENSBTAP00000016108/1-422 ---------- ---------- ---------- ------MKCL VTGSNVKVLG ENSTTRP00000012537/1-390 ---------- ---------- ---------- ------MKCL VTGSNVKVLG bmy_07829T0/1-416 REPRASVAAG ETRRGAAIWG PVRGPPPVTA RPRGSSMKCL VTGSNVKVLG BACU020056/1-390 ---------- ---------- ---------- ------MKCL VTGSNVKVLG 51 100 ENSP00000311360/1-391 KAVHSLSRIG DELYLEPLED GLSLRTVNSS RSAYACFLFA PLFFQQYQAA ENSBTAP00000016108/1-422 KAVHSLSRIG DELYLEPLED GLSLRTVNSS RSAYACFLFA PLFFQQYQAA ENSTTRP00000012537/1-390 KAVHSLSRIG DELYLEPLED GLSLRTVNSS RSAYACFLFA PLFFQQYQAA bmy_07829T0/1-416 KAVHSLSRIG DELYLEPLED GLSLRTVNSS RSAYACFLFA PLFFQQYQVA BACU020056/1-390 KAVHSLSRIG DELYLEPLED GLSLRTVNSS RSAYACFLFA PLFFQQYQAA 101 150 ENSP00000311360/1-391 TPGQDLLRCK ILMKSFLSVF RSLAMLEKTV EKCCISLNGR SSRLVVQLHC ENSBTAP00000016108/1-422 TPGQDQLRCK ILMKSFLSVF RSLAMLEKTV EKCCISLNDR SSRLVVQLHC ENSTTRP00000012537/1-390 TPGQDPLRCK ILMKSFLSVF RSLVILEKTV EKCCISLNVR SSRLVVQLYC bmy_07829T0/1-416 TPGQDPLRF- ---------F RSLAMLEKTV EKCCISLNGR SSRLVVQLYC BACU020056/1-390 TPGQDPLRCK ILMKSFLSVF RSLAMLEKTV EKCCISLNGR SSRLVVQLYC 151 200 ENSP00000311360/1-391 KFGVRKTHNL SFQDCESLQA VFDPASCPHM LRAPARVLGE AVLPFSPALA ENSBTAP00000016108/1-422 KYGVRKTHNL SFQDCESLQA VFDPALCPHV LRAPARVLVE AVLPFPPALA ENSTTRP00000012537/1-390 KYGVRKTHNL SFQDCESLQA VFDPAVCPHV LCAPARVLGE AVLPFPPALA bmy_07829T0/1-416 KYGVRKTHNL SFQDCESLQA VFDPAVCPHV LRAPARVLGE AVLPFPPALA BACU020056/1-390 KYGVRKTHNL SFQDCESLQA VFDPAVCPHV LRAPARVLGE AVLPFPPALA 201 250 ENSP00000311360/1-391 EVTLGIGRGR RVILRSYHEE EADSTAKAMV TEMCLGEEDF QQLQAQEGVA ENSBTAP00000016108/1-422 EVTLGIGHGR RVILRSYQEE EADSAIKAMV TEMSIGEEDF QQLQAQEGVA ENSTTRP00000012537/1-390 EVTLGIGRGH RIILRSYQ-E EADSTIKAMV TEMSIGGEDF QQLQAQEGVA bmy_07829T0/1-416 EVTLGIGRGH RVILRSYQ-E EADSTVKAMV TEMSIGGEDF QQLQAQEGVA BACU020056/1-390 EVTMGIGRGH RVILRSYQ-E EADSTVKAMV TEMSIGGEDF QQLQAQEGVA 251 300 ENSP00000311360/1-391 ITFCLKEFR- ---------- ---------- ------GLLS FAESANLNLS ENSBTAP00000016108/1-422 ITFCLKEFRV RFLPCTHCPV HLSSLPSLHA LLLPCQGLLS FAESANLSLS ENSTTRP00000012537/1-390 ITFCLKEFR- ---------- ---------- ------GLLS FAESANLSLS bmy_07829T0/1-416 ITFCLKEFR- ---------- ---------- ------GLLS FADSANLSLS BACU020056/1-390 ITFCLKEFR- ---------- ---------- ------GLLS FADSANLSLS 301 350 ENSP00000311360/1-391 IHFDAPGRPA IFTIKDSLLD GHFVLATLSD TDSHSQDLGS P-ERHQPVPQ ENSBTAP00000016108/1-422 IHFDAPGRPA IFAIEDSLLD GHFVLATLSE SDSHPQTLHA QEELQRPEPG ENSTTRP00000012537/1-390 IYFDGPGRPA IFAIKDSLLD GHFVLATLSE PDPHPQDLRA P-ELQQPAPQ bmy_07829T0/1-416 IYFDGPGRPA IFAIKDSLLD GHFVLATLSE PDPHPQDLGA P-ELQRPAPQ BACU020056/1-390 IYFDGPGRPA IFAIKDSLLD GHFVLATLSE PDPHPQDLRG P-ELQRPAPQ 351 400 ENSP00000311360/1-391 LQAHSTPH-- PDDFANDDID SYMIAMETTI GNEGSRVLPS ISLSPGPQPP ENSBTAP00000016108/1-422 PQAHSTPHLD LDDFAVDDMD SYMIAMETTT GSEGSRALPS ISLSPGLQRP ENSTTRP00000012537/1-390 LQAHSTPH-- LDDFALDDID SYMIAMETTV GSEGSRTLPS TSLSPGFQPH bmy_07829T0/1-416 LQADSTPH-- LDDFALDDID SYMIAMETTV GSEGSRTLPS TSLSPGLQPP BACU020056/1-390 LQAHSTPH-- LDDFALDDID SYMIAMETTV GSEGSRTLPS TSLSPGLQPP 401 450 ENSP00000311360/1-391 KSPGPHSEEE DEA-EPSTVP GTPPPKKFRS LFFGSILAPV RSPQGPSPVL ENSBTAP00000016108/1-422 CSSSPHSEEE DDDMEPSTVP GTPPPKKFRS LFFGSILAPA HSPQGPSPVL ENSTTRP00000012537/1-390 CSPGSHSEEE DDT-EPSTVP GTPPPKKFRS LFFGSILAPA HSPQGPSPVL bmy_07829T0/1-416 CSPGSHSEEE DDT-EPSTVP GTPPPKKFRS LFFGSILAPA HSPQGPSPVL BACU020056/1-390 CSPGSHSEEE DDT-EPSTVP GTPPPKKFRS LFFGSILAPA HSPQGPSPVL 451 500 ENSP00000311360/1-391 AEDSEGEG ENSBTAP00000016108/1-422 AEDSEGEG ENSTTRP00000012537/1-390 AEDSEGEG bmy_07829T0/1-416 AEDSEGEG BACU020056/1-390 AEDSEGEG