KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:58:19 2014  Check: 00 ..

 Name: bmy_09949T0/1-117         Len:    179  Check:  195  Weight:  1.00
 Name: ENSP00000410769/1-179     Len:    179  Check:  4388  Weight:  1.00
 Name: BACU020313/1-177          Len:    179  Check:  1864  Weight:  1.00
 Name: ENSTTRP00000014470/1-177  Len:    179  Check:  1864  Weight:  1.00
 Name: ENSBTAP00000016130/1-170  Len:    179  Check:  5493  Weight:  1.00

//


                          1                                                   50
bmy_09949T0/1-117         MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL 
ENSP00000410769/1-179     MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL 
BACU020313/1-177          MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL 
ENSTTRP00000014470/1-177  MSSNECFKCG RSGHWARECP TGGGRGRGMR SRGRGGFTSD RGFQFVSSSL 
ENSBTAP00000016130/1-170  MSSNECFKCG RSGHWARECP TGGGRGRGMR SRG------- RGFQFVSSSL 


                          51                                                 100
bmy_09949T0/1-117         PDICYRCGES GHLAKDCDLQ ED-------- ------VSCR DA-------- 
ENSP00000410769/1-179     PDICYRCGES GHLAKDCDLQ EDVEACYNCG RGGHIAKDCK EPKREREQCC 
BACU020313/1-177          PDICYRCGES GHLAKDCDLQ ED--ACYNCG RGGHIAKDCK EPKREREQCC 
ENSTTRP00000014470/1-177  PDICYRCGES GHLAKDCDLQ ED--ACYNCG RGGHIAKDCK EPKREREQCC 
ENSBTAP00000016130/1-170  PDICYRCGES GHLAKDCDLQ ED--ACYNCG RGGHIAKDCK EPKREREQCC 


                          101                                                150
bmy_09949T0/1-117         ---------- ---------- ---------- ---------- WCGETGHVAI 
ENSP00000410769/1-179     YNCGKPGHLA RDCDHADEQK CYSCGEFGHI QKDCTKVKCY RCGETGHVAI 
BACU020313/1-177          YNCGKPGHLA RDCDHADEQK CYSCGEFGHI QKDCTKVKCY RCGETGHVAI 
ENSTTRP00000014470/1-177  YNCGKPGHLA RDCDHADEQK CYSCGEFGHI QKDCTKVKCY RCGETGHVAI 
ENSBTAP00000016130/1-170  YNCGKPGHLA RDCDHADEQK CYSCGEFGHI QKDCTKVKCY RCGETGHVAI 


                          151                                                200
bmy_09949T0/1-117         NCSKTSEVNC YRCGESGHLA RECTIEATA 
ENSP00000410769/1-179     NCSKTSEVNC YRCGESGHLA RECTIEATA 
BACU020313/1-177          NCSKTSEVNC YRCGESGHLA RECTIEATA 
ENSTTRP00000014470/1-177  NCSKTSEVNC YRCGESGHLA RECTIEATA 
ENSBTAP00000016130/1-170  NCSKTSEVNC YRCGESGHLA RECTIEATA