KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:20 2014 Check: 00 .. Name: BACU010346/1-223 Len: 378 Check: 956 Weight: 1.00 Name: ENSTTRP00000009143/1-273 Len: 378 Check: 3162 Weight: 1.00 Name: ENSBTAP00000016136/1-348 Len: 378 Check: 3872 Weight: 1.00 Name: bmy_08432T0/1-378 Len: 378 Check: 2090 Weight: 1.00 Name: ENSP00000362935/1-347 Len: 378 Check: 2404 Weight: 1.00 // 1 50 BACU010346/1-223 MTEVVDKD-- ---------- ---------- ---------- ---------- ENSTTRP00000009143/1-273 MSLLCRNKGC GQHFDPQTNL P--------- ---------- ---------- ENSBTAP00000016136/1-348 MSLLCHNKGC GQHFDPQTNL P--------- ---------- ---------- bmy_08432T0/1-378 MSLLCHNKGC GQHFDPQTNL PDCKHINLDK KVGSDVWYSI FPSLILLPVS ENSP00000362935/1-347 MSLLCRNKGC GQHFDPNTNL P--------- ---------- ---------- 51 100 BACU010346/1-223 -------PGL LVVHRS---- ---------- ---------- ---------- ENSTTRP00000009143/1-273 -DSCCHHPGV PIFHDALKGW SCCRKRTVDF SEFLNIKGCT VGPHCAEKLP ENSBTAP00000016136/1-348 -DSCYHHPGV PIFHDALKGW SCCRKRTVDF SEFLNIKGCT VGPHCAEKLP bmy_08432T0/1-378 TDSCCHHPGV PIFHDALKGW SCCRKRTVDF SEFLNIKGCT VGPHCAEKLP ENSP00000362935/1-347 -DSCCHHPGV PIFHDALKGW SCCRKRTVDF SEFLNIKGCT MGPHCAEKLP 101 150 BACU010346/1-223 ----NEDGRK AAALKEGDN- ---------- RLEELGSELP PKLLPLNISQ ENSTTRP00000009143/1-273 ETPQPEGPAT SNSLQEQKPP XXXXXXXXXX XXXXXXXXXX XXXXXXNISQ ENSBTAP00000016136/1-348 EVPQPEGPGT SSSLQEQRPP NVIPKSAETL RRERPKSELL PKLLPLNISQ bmy_08432T0/1-378 ETPQPEGPAT SSSLQEQKPP NTIPKSAETL RRERPKSELP PKLLPLNISQ ENSP00000362935/1-347 EAPQPEGPAT SSSLQEQKPL NVIPKSAETL RRERPKSELP LKLLPLNISQ 151 200 BACU010346/1-223 ALGMALEKKE LDQEPGAGLD SSLIQTGASC QNPGCDA--- ---------- ENSTTRP00000009143/1-273 ALGMALEQKE LDQEPGAGLD SSLIQTGASC QNPGCDAVYQ GPESDATPCT ENSBTAP00000016136/1-348 ALEMALEQKE LDQEPGAGVD SSLIRIGASC QNPGCDAVYQ GLESDATPCT bmy_08432T0/1-378 ALGMALEKKE LDQEPGAGLD SSLIQTGASC QNPGCDAVYQ GPESDATPCT ENSP00000362935/1-347 ALEMALEQKE LDQEPGAGLD -SLIRTGSSC QNPGCDAVYQ GPESDATPCT 201 250 BACU010346/1-223 ---------- ---------- ---------- ---------- ----LPASCR ENSTTRP00000009143/1-273 YHPGAPRFHE GMKSWSCCGI QTLDFGAFLA QPGCRVGRHD WGKQLPASCR ENSBTAP00000016136/1-348 YHPGAPQFHE GVKSWSCCGI QTLDFGAFLA QPGCRVGRHD WGKQVPASCR bmy_08432T0/1-378 YHPGAPRFHE GMKSWSCCGI QTLDFGAFLA QPGCRVGRHD WGKQLPASCR ENSP00000362935/1-347 YHPGAPRFHE GMKSWSCCGI QTLDFGAFLA QPGCRVGRHD WGKQLPASCR 251 300 BACU010346/1-223 HDWHQTDSLV VVTVYGQIPL PAFNWVKASQ TELHVHIVFD GNRVFQAQMK ENSTTRP00000009143/1-273 HDWHQTDSLV VVTVYGQIPL PAFNWVKASQ TELHVHIVFD GNNVFQAQMK ENSBTAP00000016136/1-348 HDWHQTDSLV VVTIYGQIPL PAFNWVKASQ TELHVHIVFD GNRVFQAQMK bmy_08432T0/1-378 HDWHQTDSLV VVTVYGQIPL PAFNWVKASQ TELHVHIVFD GNRVFQAQMK ENSP00000362935/1-347 HDWHQTDSLV VVTVYGQIPL PAFNWVKASQ TELHVHIVFD GNRVFQAQMK 301 350 BACU010346/1-223 LWGVINVEQS SVSLMPSRVE ISLVKADPGS WAQLEHPDAL AEKAKAGVGL ENSTTRP00000009143/1-273 LWG------- ---------- ---------- ---------- ---------- ENSBTAP00000016136/1-348 LWGVIDVEQS SVSLMPSRVE ISLVKADPGS WAQLEHPDAL AEKAKAKVGL bmy_08432T0/1-378 LWGVINVEQS SVSLMPSRVE ISLVKADPGS WAQLEHPDAL AEKAKAGVGL ENSP00000362935/1-347 LWGVINVEQS SVFLMPSRVE ISLVKADPGS WAQLEHPDAL AKKARAGVVL 351 400 BACU010346/1-223 EMDEEESEDS DDDLSWTEEE EEEEVMGE ENSTTRP00000009143/1-273 ---------- ---------- -------- ENSBTAP00000016136/1-348 EMDEEESEDS DDDLSWTEEE EEEEAMGE bmy_08432T0/1-378 EMDEEESEDS DDDLSWTEEE EEEEVMGE ENSP00000362935/1-347 EMDEEESDDS DDDLSWTEEE EEEEAMGE