KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:25 2014 Check: 00 .. Name: ENSP00000299663/1-219 Len: 219 Check: 9213 Weight: 1.00 Name: ENSBTAP00000016163/1-214 Len: 219 Check: 5134 Weight: 1.00 Name: ENSTTRP00000013518/1-218 Len: 219 Check: 7031 Weight: 1.00 Name: bmy_05555T0/1-130 Len: 219 Check: 6558 Weight: 1.00 Name: BACU003055/1-114 Len: 219 Check: 3999 Weight: 1.00 // 1 50 ENSP00000299663/1-219 MNSSKSSETQ CTERGCFSSQ MFLWTVAGIP ILFLSACFIT RCVVTFRIFQ ENSBTAP00000016163/1-214 -MNSSTSPAS QTERRCFSFQ LFSWAIAGTS ILLLSACFIT RCVVTYSIFQ ENSTTRP00000013518/1-218 MDSSKSSASQ STERGCFSSQ VFLWTVAGLC ILLLSACFIT RCVVSYHTFQ bmy_05555T0/1-130 ---------- ---------- ---------- MNINCAPFVT ---VTYHTFQ BACU003055/1-114 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000299663/1-219 TCDEKKFQLP ENFTELSCYN YGSGSVKNCC PLNWEYFQSS CYFFSTDTIS ENSBTAP00000016163/1-214 LCDEKKFQPP GDSMELSCYN DGSGSVKNCC PLKWFHFQSS CYLFSPDTMS ENSTTRP00000013518/1-218 LCDEKKFQPL ENSTEFSCYN DGLGSVKNCC PLNWVPFQSS CYFFSTNTMT bmy_05555T0/1-130 LCDEKKFQPP ENFTEISCYN DGLGSVKNCC PLNWVHFQSS CYFFSTNTMT BACU003055/1-114 ---------- ---------- ---------- ---------- --------MT 101 150 ENSP00000299663/1-219 WALSLKNCSA MGAHLVVINS QEEQEFLSYK KPKMREFFIG LSDQVVEGQW ENSBTAP00000016163/1-214 WRASLKNCSS MGAHLVVINT QEEQEFLYYT KPRKKEFYIG LTDQVTEGQW ENSTTRP00000013518/1-218 WTASLKNCSS MGAHLVVINT QEEQEFLYSR KPKRKEFYIG LTDQVTEGQW bmy_05555T0/1-130 WSASSKNCSS MGAHLVVINT QEEQEFLYSM KPKRKEFYIG LTDQVTEGQW BACU003055/1-114 WSASSKNCSS MGAHLVVINT QEEQEFLYNM KPKRKEFYIG LTDQVTEGQW 151 200 ENSP00000299663/1-219 QWVDGTPLTK SLSFWDVGEP NNIATLEDCA TMRDSSNPRQ NWNDVTCFLN ENSBTAP00000016163/1-214 QWVDGTPFTK SLSFWDAGEP NNLVIVEDCA TIRDSSNPRQ NWNDVPCFFN ENSTTRP00000013518/1-218 QWVDGTPFTK SLSFWDIGEP NNIVTVEDCA TIRDSSNPRQ NWNDMPCFFN bmy_05555T0/1-130 QWVDGTPFTE SLR------- ---------- ---------- ---------- BACU003055/1-114 QWVDGTPFTK SLSFWDKGEP NNIVTVEDCA TMRDSSNPRQ NWNDMPCFFN 201 250 ENSP00000299663/1-219 YFRICEMVGI NPLNKGKSL ENSBTAP00000016163/1-214 MFRVCEMPEI FYPLP---- ENSTTRP00000013518/1-218 MFRICEMPER NLNREKSP- bmy_05555T0/1-130 ---------- --------- BACU003055/1-114 MFRICEMPER NS-------