KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:25 2014 Check: 00 .. Name: ENSP00000221498/1-242 Len: 244 Check: 1683 Weight: 1.00 Name: ENSBTAP00000016164/1-233 Len: 244 Check: 7662 Weight: 1.00 Name: ENSTTRP00000005052/1-209 Len: 244 Check: 7362 Weight: 1.00 Name: bmy_06387T0/1-186 Len: 244 Check: 9039 Weight: 1.00 Name: BACU002208/1-235 Len: 244 Check: 8414 Weight: 1.00 // 1 50 ENSP00000221498/1-242 MGEASPPAPA RRHLLVLLLL LSTLVIPSAA APIHDADAQE SSLGLTGLQS ENSBTAP00000016164/1-233 ---------M WHQLFPLLLL SSASVPPSTA APIRDGDVQE SSSGFLGLQS ENSTTRP00000005052/1-209 ---------- ---------- ---------- --IRDGDAQE SSSGFLGLQS bmy_06387T0/1-186 ---------M WHPLALFLLL ASASVSPSTA APIRDADAQE SSLGFLGLQS BACU002208/1-235 ---------M WHPLALLLLL ASASVPPSTA APIRDADAQE SSSGFLGLQS 51 100 ENSP00000221498/1-242 LLQGFSRLFL K--GNLLRGI DSLFSAPMDF RGLPGNYHKE ENQEHQLGNN ENSBTAP00000016164/1-233 LLQGFTRLFL K--DDLLRGM DSFFSAPMDF RGLPRNYHQE ENQERRLGNN ENSTTRP00000005052/1-209 LLQAFTRLFK ---DDLMRSM DSFFSAPMDF RGLPRNYHQE ENQKHRLGNK bmy_06387T0/1-186 LLQGFTRLFL ---------- ---------- ---------- ---------- BACU002208/1-235 LLQAFTRLFL KPQDDLLRVM DSFFSAPMDF RGLPRNYHQE ENQKHRLGNK 101 150 ENSP00000221498/1-242 TLSSHLQIDK MTDNKTGEVL ISENVVASIQ PAEGSFEGDL KVPRMEEKEA ENSBTAP00000016164/1-233 TLSSHLQIDK VTDNKTGEVV ISEKVVASIE PGEGSLEGDW KVPKIEEKEA ENSTTRP00000005052/1-209 TLSSHLQIDK VTNNKTGEVL ISEKVVASIE PGEGSLQGDW KVPKIEEKEA bmy_06387T0/1-186 ---------K VTNNKTGEVL ISEKVVASIE PGEGSLQGDW KVPKIEEKEA BACU002208/1-235 TLSSHLQIDK VTNNKTGEVL ISEKVVASIE PGEGSLQGDW KVPKIEEKEA 151 200 ENSP00000221498/1-242 LVPIQKATDS FHTELHPRVA FWIIKLPRRR SHQDALEGGH WLSEKRHRLQ ENSBTAP00000016164/1-233 LAPVPKAVDS FHPEPHPRVA VWIMKLPRRR SHQNTQEGGH WLSEKRHRLQ ENSTTRP00000005052/1-209 LVPVPKAMDS FHPEPHPRMV FWIMKLPRRR SHQDAQESDH WLSEKQHRLQ bmy_06387T0/1-186 LVPVPKAVDS FHPEPHPRMT FWIMKLPRRR SHQDAQESSH WLSEKRHRLQ BACU002208/1-235 LVPVPKAVDS FHPEPHPRMT FWIMKLPRRR SHQDAQESSH WLSEKQHRLQ 201 250 ENSP00000221498/1-242 AIRDGLRKGT HKDVLEEGTE SSSHSRLSPR KTHLLYILRP SRQL ENSBTAP00000016164/1-233 AIRDGLREGT REDGLEESVQ SSSHSRLPAR KAHFLYILRP SQQL ENSTTRP00000005052/1-209 AIRDGLREGT REDVLEQGTQ SSSHARLPAR KTHFLYILRP SQQL bmy_06387T0/1-186 AIRDGLREGT REDVLEEGTQ SSSHARLPAR KTHFLYILRP SQQL BACU002208/1-235 AIRDGLREGT REDVLEEGTQ SSSHARLPAR KTHFLYILRP SQQL