KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:29 2014 Check: 00 .. Name: ENSP00000001146/1-512 Len: 512 Check: 9541 Weight: 1.00 Name: ENSBTAP00000016198/1-512 Len: 512 Check: 9848 Weight: 1.00 Name: BACU006020/1-512 Len: 512 Check: 9490 Weight: 1.00 Name: bmy_17650T0/1-498 Len: 512 Check: 7145 Weight: 1.00 Name: ENSTTRP00000005647/1-511 Len: 512 Check: 4589 Weight: 1.00 // 1 50 ENSP00000001146/1-512 MLFEGLDLVS ALATLAACLV SVTLLLAVSQ QLWQLRWAAT RDKSCKLPIP ENSBTAP00000016198/1-512 MLFEGLELVS ALATLAACLV SVTLLLAVSQ QLWQLRWAAT RDKSCKLPIP BACU006020/1-512 MLFEGLELVS ALATLAACLV SVTLLLAVSQ QLWQLRWAAT RDKSCKLPIP bmy_17650T0/1-498 MLFEGLELVS ALATLAACLV SVTLLLAVSQ QLWQLRWAAT RDKSCKLPIP ENSTTRP00000005647/1-511 MLFEGLELVS ALATLAACLV SVTLLLAVSQ QLWQLRWAAT RDKSCKLPIP 51 100 ENSP00000001146/1-512 KGSMGFPLIG ETGHWLLQGS GFQSSRREKY GNVFKTHLLG RPLIRVTGAE ENSBTAP00000016198/1-512 KGSMGFPLIG ETGHWLLQGS GFQSSRREKY GNVFKTHLLG RPLIRVTGAE BACU006020/1-512 KGSMGFPLIG ETGHWLLQGS GFQSSRREKY GNVFKTHLLG RPLIRVTGAE bmy_17650T0/1-498 KGSMGFPLIG ETGHWLLQGS GFQSSRREKY GNVFKTHLLG RPLIRVTGAE ENSTTRP00000005647/1-511 KGSMGFPLIG ETGHWLLQGS GFQSSRREKY GNVFKTHLLG RPLIRVTGAE 101 150 ENSP00000001146/1-512 NVRKILMGEH HLVSTEWPRS TRMLLGPNTV SNSIGDIHRN KRKVFSKIFS ENSBTAP00000016198/1-512 NVRKILMGEH HLVSTEWPRS TRMLLGPNTV SNSIGDIHRN KRKVFSKIFS BACU006020/1-512 NVRKILMGEH HLVSTEWPRS TRMLLGPNTV ANSIGDIHRN KRKVFSKIFS bmy_17650T0/1-498 NVRKILMGEH HLVSTEWPRS TRMLLGPNT- ---------- ---VFSKIFS ENSTTRP00000005647/1-511 NVRKILMGEH HLVSTEWPRS TRMLLGPNTV ANSIGDIHRN KRKVFSKIFS 151 200 ENSP00000001146/1-512 HEALESYLPK IQLVIQDTLR AWSSHPEAIN VYQEAQKLTF RMAIRVLLGF ENSBTAP00000016198/1-512 HEALESYLPK IQLVIQDTLR AWSSHPEAIN VYQEAQKLTF RMAIRVLLGF BACU006020/1-512 HEALESYLPK IQLVIQDTLR AWSSYPEAIN VYQEAQKLTF RMAIRVLLGF bmy_17650T0/1-498 HEALESYLPK IQLVIQDTLR AWSSHPEAIN VYQEAQKLTF RMAIRVLLGF ENSTTRP00000005647/1-511 HEALESYLPK IQLVIQDTLR AWSSHPEAIN VYQEAQKLTF RMAIRVLLGF 201 250 ENSP00000001146/1-512 SIPEEDLGHL FEVYQQFVDN VFSLPVDLPF SGYRRGIQAR QILQKGLEKA ENSBTAP00000016198/1-512 SIPEEDLGHL FEVYQQFVEN VFSLPVDLPF SGYRRGIQAR QTLQKGLEKA BACU006020/1-512 SIPEEDLGHL FEVYQQFVEN VFSLPVDLPF SGYRRGIQAR QTLQKGLEKA bmy_17650T0/1-498 SIPEEDLGHL FEVYQQFVEN VFSLPVDLPF SGYRRGIQAR QTLQKGLEKA ENSTTRP00000005647/1-511 SIPEEDLGHL FEVYQQFVEN VFSLPVDLPF SGYRRGIQAR QTLQKGLEKA 251 300 ENSP00000001146/1-512 IREKLQCTQG KDYLDALDLL IESSKEHGKE MTMQELKDGT LELIFAAYAT ENSBTAP00000016198/1-512 IREKLQCTQG KDYSDALDIL IESSKEHGKE MTMQELKDGT LELIFAAYAT BACU006020/1-512 IREKLQCTQG KDYSDALDIL IESSKEHGEE MTMQELKDGT LELIFAAYAT bmy_17650T0/1-498 IREKLQCTQG KDYSDALDIL IESSKEHGEE MTMQELKDGT LELIFAAYAT ENSTTRP00000005647/1-511 IREKLQCTQG KDYSDALDIL IESSKEHGEE MTMQELKDGT LELIF-AYAT 301 350 ENSP00000001146/1-512 TASASTSLIM QLLKHPTVLE KLRDELRAHG ILHSGGCPCE GTLRLDTLSG ENSBTAP00000016198/1-512 TASASTSLIM QLLKHPAVLE KLREELRAKG LLHSGGCPCE GTLRLDTLSG BACU006020/1-512 TASASTSLIM QLLKHPAVLE KLREELRAQG ILHSGGCPCE GTLRLSTLSG bmy_17650T0/1-498 TASASTSLIM QLLKHPAVLE KLREELRAQG ILHSGGCPCE GTLRLSTLSG ENSTTRP00000005647/1-511 TASASTSLIM QLLKHPAVLE KLREELRAQG ILHSGGCPCE GTLRLSTLSG 351 400 ENSP00000001146/1-512 LRYLDCVIKE VMRLFTPISG GYRTVLQTFE LDGFQIPKGW SVMYSIRDTH ENSBTAP00000016198/1-512 LHYLDCVIKE VMRLFTPVSG GYRTVLQTFE LDGFQIPKGW SVMYSIRDTH BACU006020/1-512 LHYLDCVIKE VMRLFTPVSG GYRTVLQTFE LDGFQIPKGW SVMYSIRDTH bmy_17650T0/1-498 LHYLDCVIKE VMRLFTPVSG GYRTVLQTFE LDGFQIPKGW SVMYSIRDTH ENSTTRP00000005647/1-511 LHYLDCVIKE VMRLFTPVSG GYRTVLQTFE LDGFQIPKGW SVMYSIRDTH 401 450 ENSP00000001146/1-512 DTAPVFKDVN VFDPDRFSQA RSEDKDGRFH YLPFGGGVRT CLGKHLAKLF ENSBTAP00000016198/1-512 DTAPVFKDVN VFDPDRFGQA RSEDKDGRFH YLPFGGGVRT CLGKHLAKLF BACU006020/1-512 DTAPVFKDVN VFDPDRFGQA RSEDKDGRFH YLPFGGGVRT CLGKHLAKLF bmy_17650T0/1-498 DTAPVFKDVN VFDPDRFGQA RSEDKDGRFH YLPFGGGVRT CLGKHLAKLF ENSTTRP00000005647/1-511 DTAPVFKDVN VFDPDRFGQA RSEDKDGRFH YLPFGGGVRT CLGKHLAKLF 451 500 ENSP00000001146/1-512 LKVLAVELAS TSRFELATRT FPRITLVPVL HPVDGLSVKF FGLDSNQNEI ENSBTAP00000016198/1-512 LKVLAVELAS TSRFELATRT FPRITLVPVL HPVDGLSVKF FGLDSNQNKI BACU006020/1-512 LKVLAVELAS TSRFELATRT FPRITLVPVL HPVDGLSVKF FGLDSNQNKI bmy_17650T0/1-498 LKVLAVELAS TSRFELATRT FPRITLVPVL HPVDGLSVKF FGLDSNQNKI ENSTTRP00000005647/1-511 LKVLAVELAS TSRFELATRT FPRITLVPVL HPVDGLSVKF FGLDSNQNKI 501 550 ENSP00000001146/1-512 LPETEAMLSA TV ENSBTAP00000016198/1-512 LPETEAMLSA TV BACU006020/1-512 LPETEAMLSA TV bmy_17650T0/1-498 LPETEAMLSA TV ENSTTRP00000005647/1-511 LPETEAMLSA TV