KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:35 2014 Check: 00 .. Name: bmy_21928T0/1-630 Len: 1287 Check: 756 Weight: 1.00 Name: ENSP00000298767/1-1190 Len: 1287 Check: 9410 Weight: 1.00 Name: ENSBTAP00000016211/1-1193 Len: 1287 Check: 364 Weight: 1.00 Name: ENSTTRP00000007369/1-1270 Len: 1287 Check: 7988 Weight: 1.00 Name: BACU005457/1-1203 Len: 1287 Check: 997 Weight: 1.00 // 1 50 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016211/1-1193 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007369/1-1270 MVQGPVQTLA LTIHRRKRRR SSPPHRVSYL PRAESFASLA HQPAPFSRAG BACU005457/1-1203 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 ---------- ---------- ---------- ----MTSRFG KTYSRKGGNG ENSBTAP00000016211/1-1193 ---------- ---------- ---------- ----MTSRFG KTYSRKGGNG ENSTTRP00000007369/1-1270 LRRPPVGRWE RERRRRPEAK ALARRRGEYE TGVKMTSRFG KTYSRKGGNG BACU005457/1-1203 ---------- ---------- -------EYE TGVKMTSRFG KTYSRKGGNG 101 150 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 SSKFDEVFSN KRTTLSTKWG ETTFMAKLGQ KRPNFKPDIQ EIPKKPKVEE ENSBTAP00000016211/1-1193 SSKFDEVFSN KRTTLSTKWG ETTFMAKLGQ KRPNFKPDIQ EVPKKPKIEE ENSTTRP00000007369/1-1270 SSKFDEVFSN KRTTLSTKWG ETTFMAKLGQ KRPNFKPDIQ EIPKKPKMEE BACU005457/1-1203 SSKFDEVFSN KRTTLSTKWG ETTFMAKLGQ KRPNFKPDIQ EIPKKPKMEE 151 200 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 ESTGDPFGFD SDDESLPVSS KNLAQVKCSS YSESSEAAQL EEVTSVLEAN ENSBTAP00000016211/1-1193 ENTGDPFGFD SDDESLPVSS KNLA--KGSS YTESSEAAQL EEVTSVLEAN ENSTTRP00000007369/1-1270 DDTGDPFGFD SDDESLPVSS KNLAQGKGSS YSESSEAAQL EDVTSVLETN BACU005457/1-1203 EDTGDPFGFD SDDESLPVSS KNLAQGKGSS YSESSEAAQL EDVTSVLETN 201 250 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 SKISHVVVED TVVSDKCFPL EDTLLGKEKS TNRIVEDDAS ISSCNKLITS ENSBTAP00000016211/1-1193 SKISHVMGED SVVSDKCLRL EDTLLGKEKS TNRVLEDDAS RSSCAKLMTS ENSTTRP00000007369/1-1270 SKISHVMGED IVVSDKCLRL EDTLLGKEKS TNRVLDDDAS RSSCAKLITS BACU005457/1-1203 SKISHVMGED SVVSDKCLRL EDTLLGKEKS TNRVLDDDAS RSSCAKLMTS 251 300 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 DKVENFHEEH EKNSHHIHKN ADDSTKKPNA ETTVAS---- -EIKETNDTW ENSBTAP00000016211/1-1193 DKVENFSEEH EKNSHHIYKN AEDSTKKHNA ETTVASGYKA DEIKE-NDTW ENSTTRP00000007369/1-1270 DKVENFSEEH EKNSHHIYKN AEDSTKKPNA ETTVASGYKA DEIKETNDTW BACU005457/1-1203 DKVENFSEEH EKNSHHIYKN AEDSTKKPNA ETTVASGYKA DEIKETNDTW 301 350 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 NSQFGKRPES PSEISPIKGS VRTGLFEWDN DFEDIRSEDC ILSLDSDPLL ENSBTAP00000016211/1-1193 NSQLGKRSES PSETSSIKGS VRTGLYEWDN DFEDSRSEDC ILNLDSDPLL ENSTTRP00000007369/1-1270 NSQLGRRSES PSETSSIKGS VRTGLYEWDN DFEDSRSEDC ILSLDSDPLL BACU005457/1-1203 NSQLGRRSES PSETSSIKGS VRTGLYEWDN DFEDSRSEDC ILSLDSDPLL 351 400 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 EMKDDDFKNR LENLNEAIEE DIVQSVLRPT NCRTYCRANK TKSSQGASNF ENSBTAP00000016211/1-1193 EMKDEDFKNR LENLNEAIEE DMMQSVLRPS NCRTYCRANK AKSSQGASSF ENSTTRP00000007369/1-1270 EMKDEDFKNR LENLNEAIEE DIMQRVLRPS NCRTYCRANK AKSSQGASNF BACU005457/1-1203 EMKDEDFKNR LENLNEAIEE DIMQSVLRPS NCRTYCRANK AKSSQGASNF 401 450 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 DKLMDGTSQA LAKANSESSK DGLNQAKKGG VSCGTSFRGT VGRTRDYTVL ENSBTAP00000016211/1-1193 DKLMDGTSQA LAKANSESSK DGLNQAKKGS VSCGTSFRGT VGRTRDYTVL ENSTTRP00000007369/1-1270 DKLMDGTSQG LAKANSESSK DGLNQAKKGS VSCGTSFRGT VGRTRDYTVL BACU005457/1-1203 DKLMDGTSQA LAKANSESSK DGLNQAKKGS VSCGTSFRGT VGRTRDYTVL 451 500 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 HPSCLSVCNV TIQDTMERSM DEFTASTPAD LGEAGRLRKK ADIATSKTTT ENSBTAP00000016211/1-1193 HPSCLSVCNV TIQDTMERSM DEFTASTPAD LGEAGRLRKK ADIATSKTTT ENSTTRP00000007369/1-1270 HPSCLSVCNV TIQDTMERSM DEFTASTPAD LGEAGRLRKK ADIATSKTTT BACU005457/1-1203 HPSCLSVCNV TIQDTMERSM DEFTASTPAD LGEAGRLRKK ADIATSKTTT 501 550 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 RFRPSNTKSK KDVKLEFFGF EDH-ETGGDE GGSGSSNYKI KYFGFDDLSE ENSBTAP00000016211/1-1193 RFRPSNTKSK KDVKLEFFGF EDHDETGGDE GGSGSSNYKI KYFGFDDLSE ENSTTRP00000007369/1-1270 RFRPSNTKSK KDVKLEFFGF EDHDETGGDE GGSGSSNYKI KYFGFDDLSE BACU005457/1-1203 RFRPSNTKSK KDVKLEFFGF EDHDETGGDE GGSGSSNYKI KYFGFDDLSE 551 600 bmy_21928T0/1-630 ---------- ---------- ---------- ---------- ---------- ENSP00000298767/1-1190 SEDDEDDDCQ VERKTSKKRT KTAPSPSLQP PPESNDNSQD SQSGTNNAEN ENSBTAP00000016211/1-1193 SEDDEDDDCQ VERKTSKKRT KTAPSPSLQP PPESNDNSQD SQSSSNNAEN ENSTTRP00000007369/1-1270 SEDDEDDDCQ VERKTNKKRS KTAPSPSLQP PPESSDNSQD SQSSTNNAEN BACU005457/1-1203 SEDDEDDDCQ VERKTNKKRS KTAPSPSLQP PPESSDNSQD SQSSTNNAEN 601 650 bmy_21928T0/1-630 ---------- ---------- ---------- --------SP TKAVYNARHW ENSP00000298767/1-1190 LDFTEDLPGV PESVKKPINK QGDKSKENTR KIFSGPKRSP TKAVYNARHW ENSBTAP00000016211/1-1193 LDFTEDLPGV PESVKKPPNK QGDKSKENTR KIFSGPKRSP TKAVYNARHW ENSTTRP00000007369/1-1270 LDFTEDLPGV PENVKKPPNK QGDKSKENTR KIFSGPKRSP TKAVYNARHW BACU005457/1-1203 LDFTEDLPGV PESVKKPPNK QGDKSKENTR KIFSGPKRSP TKAVYNARHW 651 700 bmy_21928T0/1-630 NHPDSEELPG PPVVKPQSVT VRLSSKEQNQ KDDGVFKAPA PPPKVIKTVT ENSP00000298767/1-1190 NHPDSEELPG PPVVKPQSVT VRLSSKEPNQ KDDGVFKAPA PPSKVIKTVT ENSBTAP00000016211/1-1193 NHPDSEELPA PPVVKPQSVT VRLSSKEQNQ KDDGVFKAPA PPPKVIKTVT ENSTTRP00000007369/1-1270 NHPDSEELPG PPAVKPQSVT VRLSSKEQNQ KDDGVFKAPA PPPKVIKTVT BACU005457/1-1203 NHPDSEELPG PPVVKPQSVT VRLSSKEQNQ KDDGVFKAPA PPPKVIKTVT 701 750 bmy_21928T0/1-630 IPTQPYQDIV TALKCRKEDK ELYTVVQHVK HFNDVVEFGE NQEFTDDIEY ENSP00000298767/1-1190 IPTQPYQDIV TALKCRREDK ELYTVVQHVK HFNDVVEFGE NQEFTDDIEY ENSBTAP00000016211/1-1193 IPTQPYQDIV TALKCRKEDK ELYTVVQHVK HFNDVVEFGE NQEFTDDIEY ENSTTRP00000007369/1-1270 IPTQPYQDIV TALKCRKEDK ELYTVVQHVK HFNDVVEFGE NQEFTDDIEY BACU005457/1-1203 IPTQPYQDIV TALKCRKEDK ELYTVVQHVK HFNDVVEFGE NQEFTDDIEY 751 800 bmy_21928T0/1-630 LLSGLKSTQP LNTRCLSVIS LATKCAMPSF RMHLRAHGMV AMVFKTLDDS ENSP00000298767/1-1190 LLSGLKSTQP LNTRCLSVIS LATKCAMPSF RMHLRAHGMV AMVFKTLDDS ENSBTAP00000016211/1-1193 LLSGLKSTQP LNTRCLSVIS LATKCAMPSF RMHLRAHGMV AMVFKTLDDS ENSTTRP00000007369/1-1270 LLSGLKSTQP LNTRCLRVIG LLSKMAVRML R------HMV AVL--NLED- BACU005457/1-1203 LLSGLKSTQP LNTRCLSVIS LATKCAMPSF RMHLRAHGMV AMVFKTLDDS 801 850 bmy_21928T0/1-630 QHHQNLSLCT AALMYILSRD RLNMDLDRAS LDLMIRLLEL EQDASSAKLL ENSP00000298767/1-1190 QHHQNLSLCT AALMYILSRD RLNMDLDRAS LDLMIRLLEL EQDASSAKLL ENSBTAP00000016211/1-1193 QHHQNLSLCT AALMYILSRD RLNMDLDRAS LDLMIRLLEL EQDASSAKLL ENSTTRP00000007369/1-1270 QHHQNLSLCT AALMYILSRD RLNMDLDRAS LDLMIRLLEL EQDASSAKLL BACU005457/1-1203 QHHQNLSLCT AALMYILSRD RLNMDLDRAS LDLMIRLLEL EQDASSAKLL 851 900 bmy_21928T0/1-630 NEKDMNKIKE KIRRLCETVH NKHLDLENIT TGHLAMETLL SLTSKRAGDW ENSP00000298767/1-1190 NEKDMNKIKE KIRRLCETVH NKHLDLENIT TGHLAMETLL SLTSKRAGDW ENSBTAP00000016211/1-1193 NEKDMNKIKE KIRRLCETVH NKHLDLENIT TGHLAMETLL SLTSKRAGDW ENSTTRP00000007369/1-1270 NEKDMNKIKE KIRRLCETVH NKHLDLENIT TGHLAMETLL SLTSKRAGDW BACU005457/1-1203 NEKDMNKIKE KIRRLCETVH NKHLDLENIT TGHLAMETLL SLTSKRAGDW 901 950 bmy_21928T0/1-630 FKEELRLLGG LDHIVDKVKE CVDHLSKDED EEKLVASLWG AERCLRVLES ENSP00000298767/1-1190 FKEELRLLGG LDHIVDKVKE CVDHLSRDED EEKLVASLWG AERCLRVLES ENSBTAP00000016211/1-1193 FKEELRLLGG LDHIVDKVKE CVDHLSKDED EEKLVASLWG AERCLRVLES ENSTTRP00000007369/1-1270 FKEELRLLGG LDHIVDKVKE CVDHLSKDED EEKLVASLWG AERCLRVLES BACU005457/1-1203 FKEELRLLGG LDHIVDKVKE CVDHLSKDED EEKLVASLWG AERCLRVLES 951 1000 bmy_21928T0/1-630 VTVHNPENQS YLIAYKDSQL IVSSAKALQH CEELIKQYNR AENSICLPDS ENSP00000298767/1-1190 VTVHNPENQS YLIAYKDSQL IVSSAKALQH CEELIQQYNR AEDSICLADS ENSBTAP00000016211/1-1193 VTVHNPENQS YLIAYKDSQL IVSSAKALQH CEELIKQYNR AENSICLPDS ENSTTRP00000007369/1-1270 VTVHNPENQS YLIAYKDSQL IVSSAKALQH CEELIKQYNR AENSICLPDS BACU005457/1-1203 VTVHNPENQS YLIAYKDSQL IVSSAKALQH CEELIKQYNR AENSICLPDS 1001 1050 bmy_21928T0/1-630 KPLPHQNVTN HVGKAVEDCM RAIIGVLLNL TNDNEWGSTK TGEQDGLIGT ENSP00000298767/1-1190 KPLPHQNVTN HVGKAVEDCM RAIIGVLLNL TNDNEWGSTK TGEQDGLIGT ENSBTAP00000016211/1-1193 KPLPQQNVTN HVGKAVEDCM RAIIGVLLNL TNDNEWGSTK TGEQDGLIGT ENSTTRP00000007369/1-1270 KPLPHQNVTN HVGKAVEDCM RAIIGVLLNL TNDNEWGSTK TGEQDGLIGT BACU005457/1-1203 KPLPHQNVTN HVGKAVEDCM RAIIGVLLNL TNDNEWGSTK TGEQDGLIGT 1051 1100 bmy_21928T0/1-630 AMNCVLQVPK YLPQEQRFDI RVLGLGLLIN LVEYSARNRH CLVNMETSCS ENSP00000298767/1-1190 ALNCVLQVPK YLPQEQRFDI RVLGLGLLIN LVEYSARNRH CLVNMETSCS ENSBTAP00000016211/1-1193 AMNCVLQVPK YLPQEQRFDI RVLGLGLLIN LVEYSARNRH CLVNMETSCS ENSTTRP00000007369/1-1270 AMNCVLQVPK YLPQEQRFDI RVLGLGLLIN LVEYSARNRH CLVNMETSCS BACU005457/1-1203 AMNCVLQVPK YLPQEQRFDI RVLGLGLLIN LVEYSARNRH CLVNMETSCS 1101 1150 bmy_21928T0/1-630 FDSSFCSGEG DDSLRIAGQV HAVQALVQLF LERERAAQLA ESKTDELIKD ENSP00000298767/1-1190 FDSSICSGEG DDSLRIGGQV HAVQALVQLF LERERAAQLA ESKTDELIKD ENSBTAP00000016211/1-1193 FDSSFCSGEG DDSLRIAGQV HAVQALVQLF LERERAAQLA ESKTDELIKD ENSTTRP00000007369/1-1270 FDSSFCSGEG DDSLRIAGQV HAVQALVQLF LERERAAQLA ESKTDELIKD BACU005457/1-1203 FDSSFCSGEG DDSLRIAGQV HAVQALVQLF LERERAAQLA ESKTDELIKD 1151 1200 bmy_21928T0/1-630 APTTQHDKSG EWQETSGEIQ WVSTEKTDGT EEKHKKEEDD EELDLNKGI- ENSP00000298767/1-1190 APTTQHDKSG EWQETSGEIQ WVSTEKTDGT EEKHKKEEED EELDLNKALQ ENSBTAP00000016211/1-1193 APTTQHDKSG EWQETSGEIQ WVSTEKADGA EEKNKKEEDD EELDLNKALQ ENSTTRP00000007369/1-1270 APTTQHDKSG EWQETSGEIQ WVSTEKTDGT EEKHKKEEDD EELDLNKALQ BACU005457/1-1203 APTTQHDKSG EWQETSGEIQ WVSTEKTDGT EEKHKKEEDD EELDLNKALQ 1201 1250 bmy_21928T0/1-630 ---------- -----FILTG VLKK---INV TTVREYLPEG DFSIMTEMLK ENSP00000298767/1-1190 HAGKHMEDCI VASYTALLLG CLCQESPINV TTVREYLPEG DFSIMTEMLK ENSBTAP00000016211/1-1193 HAGKHMEDCI VASYTALLLG CLCQESPINV TTVREYLPEG DFSIMTEMLK ENSTTRP00000007369/1-1270 HAGKHMEDCI VASYTALLLG CLCQES-INV TTVREYLPEG DFSIMTEMLK BACU005457/1-1203 HAGKHMEDCI VASYTALLLG CLCQESPINV TTVREYLPEG DFSIMTEMLK 1251 1300 bmy_21928T0/1-630 KFLSFMNLTV SGFYCSFCGF KYDTLMTVEI QIFGHSE ENSP00000298767/1-1190 KFLSFMNLTC A------VGT TGQKSISRVI EYLEHC- ENSBTAP00000016211/1-1193 KFLSFMNLTC A------VGT TGQKSISRVI EYLEHC- ENSTTRP00000007369/1-1270 KFLSFMNLTC A------VGT TGQKSISRVI EYLEHC- BACU005457/1-1203 KFLSFMNLTC A------VGT TGQKSISRVI EYLEHC-