KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:36 2014 Check: 00 .. Name: bmy_21116T0/1-255 Len: 420 Check: 2138 Weight: 1.00 Name: ENSP00000219368/1-372 Len: 420 Check: 8791 Weight: 1.00 Name: ENSBTAP00000016212/1-372 Len: 420 Check: 3555 Weight: 1.00 Name: ENSTTRP00000000325/1-372 Len: 420 Check: 6206 Weight: 1.00 // 1 50 bmy_21116T0/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000219368/1-372 MAPAPPPAAS FSPSEVQRRL AAGACWVRRG ARLYDLSSFV RHHPGGEQLL ENSBTAP00000016212/1-372 MAPAPPPAAC FSAAEVQRRL AAGACWVRRG ARLYDLTGFV RQHPGGEQLL ENSTTRP00000000325/1-372 MAPAPPPAAS FSPAEVQRRL AAGACWVRCG VRLYDLTGFV RHHPGGEQLL 51 100 bmy_21116T0/1-255 ---------- --------MS GSTSR----- ---------- ---------- ENSP00000219368/1-372 RARAGQDISA DLDGPPHRHS ANARRWLEQY YVGELRGEQQ GSMENEPVAL ENSBTAP00000016212/1-372 WARAGQDVSA DLDGPPHQHS ANARRWLEQY YVGDLQGDPE GPVENGPVAS ENSTTRP00000000325/1-372 RARAGQDVSA DLDGPPHRHS DNARRWLEQY YVGDLQGDPQ GSVENGAVTS 101 150 bmy_21116T0/1-255 ---------- ---------- ---------- ---------- ---------- ENSP00000219368/1-372 EETQKTDPAM EPRFKVVDWD KDLVDWRKPL LWQVGHLGEK YDEWVHQPVT ENSBTAP00000016212/1-372 ASTQKTDPVM EPKLKAVDWE KDLVDWQKPL LWQVGHLGEK YDEWVHQPVS ENSTTRP00000000325/1-372 ASTQKTDPAM EPKLKAVDWD KDLVDWQKPL LWQVGHLGEK YDEWVHQPVT 151 200 bmy_21116T0/1-255 ---------- ---------Y SVPIIWVPLM LYLSWSYYRT LAQGNVRLFT ENSP00000219368/1-372 RPIRLFHSDL IEGLSKTVWY SVPIIWVPLV LYLSWSYYRT FAQGNVRLFT ENSBTAP00000016212/1-372 RPIRLFHSDF VEALSKTVWY SVPIIWIPLV LYCSWSYYGA FAQGNVQLLA ENSTTRP00000000325/1-372 RPIRLFHSDL VEALSKTVWY SVPIIWVPLM LYLSWSYYRT LAQGNVRLFT 201 250 bmy_21116T0/1-255 SFTTEYSVTM PESTFPGLFM LGLLLWSLVE YLIHRFLFHM KPPNDSYYLI ENSP00000219368/1-372 SFTTEYTVAV PKSMFPGLFM LGTFLWSLIE YLIHRFLFHM KPPSDSYYLI ENSBTAP00000016212/1-372 PFATEYSVAM PESAFPGLFL LGLFLWSLLE YLIHRFLFHM KPPSDSAYLI ENSTTRP00000000325/1-372 SFTTEYSVAM PESTFPGLFM LGLLLWSLVE YLIHRFLFHM KPPNDSYYLI 251 300 bmy_21116T0/1-255 MLHFVMHGQH HKAPFDESRL VFPPVPASLV IAFFYVFLRL ILPEAVGGTV ENSP00000219368/1-372 MLHFVMHGQH HKAPFDGSRL VFPPVPASLV IGVFYLCMQL ILPEAVGGTV ENSBTAP00000016212/1-372 MLHFALHGQH HKAPFDTFRL VFPPVPASLV IAFFYLVLRL ILSAAVAGTV ENSTTRP00000000325/1-372 MLHFIMHGQH HKAPFDESRL VFPPVPASLV IAFFYVFLRL ILPEAVGGTV 301 350 bmy_21116T0/1-255 FAGGLLGYVI YDMIHYYLHF GSPHKGSYLY HLKAH---HD LASALNFGIT ENSP00000219368/1-372 FAGGLLGYVL YDMTHYYLHF GSPHKGSYLY SLKAHHVKHH FAHQKS-GFG ENSBTAP00000016212/1-372 FAGSLLGYVI YDLTHYYLHF GSPHKGSYLY HLKAHHVKHH FAHHRS-GFG ENSTTRP00000000325/1-372 FAGGLLGYVI YDMIHYYLHF GSPHKGSYLY NLKAHHVKHH FAHQQS-GFG 351 400 bmy_21116T0/1-255 FSTPLFRKNP TRRYSDNSQP CCPALSPAVA PTPVHPHPDP AKKVCLTRQY ENSP00000219368/1-372 ISTKLW---- --------DY CFHTLTPEK- -----PHLKT Q--------- ENSBTAP00000016212/1-372 ISSKLW---- --------DH FFHTLTPEE- -----PHQKT Q--------- ENSTTRP00000000325/1-372 ISTKFW---- --------DH FFHTLILEE- -----PHPKI Q--------- 401 450 bmy_21116T0/1-255 GLCPGLGLGG GCWGNPEARG ENSP00000219368/1-372 ---------- ---------- ENSBTAP00000016212/1-372 ---------- ---------- ENSTTRP00000000325/1-372 ---------- ----------