KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:36 2014 Check: 00 .. Name: ENSTTRP00000013250/1-499 Len: 605 Check: 7766 Weight: 1.00 Name: ENSBTAP00000016216/1-529 Len: 605 Check: 2005 Weight: 1.00 Name: ENSP00000438483/1-529 Len: 605 Check: 3384 Weight: 1.00 Name: bmy_06556T0/1-529 Len: 605 Check: 1839 Weight: 1.00 Name: BACU011667/1-605 Len: 605 Check: 8843 Weight: 1.00 // 1 50 ENSTTRP00000013250/1-499 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016216/1-529 ---------- ---------- ---------- ---------- ---------- ENSP00000438483/1-529 ---------- ---------- ---------- ---------- ---------- bmy_06556T0/1-529 ---------- ---------- ---------- ---------- ---------- BACU011667/1-605 MLSSLLRGPL TPSPTCFSNP PMGAQRKLEP ANRNAGPPGN LNRAGRLLEP 51 100 ENSTTRP00000013250/1-499 ---------- ---------- ------MSTN ENANSPAARL NRFKNKGKDS ENSBTAP00000016216/1-529 ---------- ---------- ------MSTN ENANSPAPRL NRFKNKGKDS ENSP00000438483/1-529 ---------- ---------- ------MSTN ENANTPAARL HRFKNKGKDS bmy_06556T0/1-529 ---------- ---------- ------MSTN ENANSPAARL NRFKNKGKDS BACU011667/1-605 HRPLADRGGR LERSRSAASF SLCLITMSTN ENANSPAARL NRFKNKGKDS 101 150 ENSTTRP00000013250/1-499 TXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXGTV ENSBTAP00000016216/1-529 TEMRRRRIEV NVELRKAKKD DQMLKRRNVS SFPDDATSPL QENRNNQGTV ENSP00000438483/1-529 TEMRRRRIEV NVELRKAKKD DQMLKRRNVS SFPDDATSPL QENRNNQGTV bmy_06556T0/1-529 TEMRRRRIEV NVELRKAKKD DQMLKRRNVS SFPDDAASPL QENRNNQGTV BACU011667/1-605 TEMRRRRIEV NVELRKAKKD DQMLKRRNVS SFPDDAASPL QENRNNQGTV 151 200 ENSTTRP00000013250/1-499 NWSVDDIVKG INSNNLESQL QATQAARKLL SREKQPPIDS IIRAGLIPKF ENSBTAP00000016216/1-529 NWSVDDIVKG INSNNLESQL QATQAARKLL SREKQPPIDN IIRAGLIPKF ENSP00000438483/1-529 NWSVDDIVKG INSSNVENQL QATQAARKLL SREKQPPIDN IIRAGLIPKF bmy_06556T0/1-529 NWSVDDIVKG INSNNLESQL QATQAARKLL SREKQPPIDS IIRAGLIPKF BACU011667/1-605 NWSVDDIVKG INSNNLESQL QATQAARKLL SREKQPPIDS IIRAGLIPKF 201 250 ENSTTRP00000013250/1-499 VSFLGRTDCS PIQFESAWAL TNIASGTSEQ TKAVVDGGAI PAFISLLASP ENSBTAP00000016216/1-529 VSFLGRTDCS PIQFESAWAL TNIASGTSEQ TKAVVDGGAI PAFISLLASP ENSP00000438483/1-529 VSFLGRTDCS PIQFESAWAL TNIASGTSEQ TKAVVDGGAI PAFISLLASP bmy_06556T0/1-529 VSFLGRTDCS PIQFESAWAL TNIASGTSEQ TKAVVDGGAI PAFISLLASP BACU011667/1-605 VSFLGRTDCS PIQFESAWAL TNIASGTSEQ TKAVVDGGAI PAFISLLASP 251 300 ENSTTRP00000013250/1-499 HTHISEQAVW ALGNIAXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000016216/1-529 HAHISEQAVW ALGNIAGDGS VFRDLVIKYG AVDPLLALLA VPDMSSLACG ENSP00000438483/1-529 HAHISEQAVW ALGNIAGDGS VFRDLVIKYG AVDPLLALLA VPDMSSLACG bmy_06556T0/1-529 HTHISEQAVW ALGNIAGDGS VFRDLVIKYG AVDPLLALLA VPDLSSLACG BACU011667/1-605 HTHISEQAVW ALGNIAGDGS VFRDLVIKYG AVDPLLALLA VPDLSSLACG 301 350 ENSTTRP00000013250/1-499 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000016216/1-529 YLRNLTWTLS NLCRNKNPAP PLEAIEQILP TLVRLLHHDD PEVLADTCWA ENSP00000438483/1-529 YLRNLTWTLS NLCRNKNPAP PIDAVEQILP TLVRLLHHDD PEVLADTCWA bmy_06556T0/1-529 YLRNLTWTLS NLCRNKNPAP PLDAVEQILP TLVRLLHHDD PEVLADTCWA BACU011667/1-605 YLRNLTWTLS NLCRNKNPAP PLDAVEQILP TLVRLLHHDD PEVLADTCWA 351 400 ENSTTRP00000013250/1-499 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXIGNIVTGT ENSBTAP00000016216/1-529 ISYLTDGPNE RIEMVVKTGV VPQLVKLLGA TELPIVTPAL RAIGNIVTGT ENSP00000438483/1-529 ISYLTDGPNE RIGMVVKTGV VPQLVKLLGA SELPIVTPAL RAIGNIVTGT bmy_06556T0/1-529 ISYLTDGPNE RIEMVVKTGV VPQLVKLLGA TELPIVTPAL RAIGNIVTGT BACU011667/1-605 ISYLTDGPNE RIEMVVKTGV VPQLVKLLGA TELPIVTPAL RAIGNIVTGT 401 450 ENSTTRP00000013250/1-499 DEQTQVVIDA GALAIFPSLL TNSKTNIQKE ATWTMSNITA GRQDQIQQVV ENSBTAP00000016216/1-529 DEQTQVVIDA GALAVFPSLL TNSKTNIQKE ATWTMSNITA GRQDQIQQVV ENSP00000438483/1-529 DEQTQVVIDA GALAVFPSLL TNPKTNIQKE ATWTMSNITA GRQDQIQQVV bmy_06556T0/1-529 DEQTQVVIDA GALAIFPSLL TNSKTNIQKE ATWTMSNITA GRQDQIQQVV BACU011667/1-605 DEQTQVVIDA GALAIFPSLL TNSKTNIQKE ATWTMSNITA GRQDQIQQVV 451 500 ENSTTRP00000013250/1-499 NHGLVPFLVG VLSKADFKTQ KEAVWAVTNY TSGGTVEQIV YLVHCGIIEP ENSBTAP00000016216/1-529 NHGLVPFLVG LLSKADFKTQ KEAAWAVNNY TSGGTVEQIV YLVHCGIIEP ENSP00000438483/1-529 NHGLVPFLVS VLSKADFKTQ KEAVWAVTNY TSGGTVEQIV YLVHCGIIEP bmy_06556T0/1-529 NHGLVPFLVG VLSKADFKTQ KEAVWAVTNY TSGGTVEQIV YLVHCGIIEP BACU011667/1-605 NHGLVPFLVG VLSKADFKTQ KEAVWAVTNY TSGGTVEQIV YLVHCGIIEP 501 550 ENSTTRP00000013250/1-499 LMNLLTAKDT KIILVILDAI SNIFQAAEKL GETEKLSIMI EECGGLDKIE ENSBTAP00000016216/1-529 LMNLLTAKDT KIVLVILDAV SNIFRAAEKL GETEKLGIMI EECGGLDKIE ENSP00000438483/1-529 LMNLLTAKDT KIILVILDAI SNIFQAAEKL GETEKLSIMI EECGGLDKIE bmy_06556T0/1-529 LMNLLTAKDT KIILVILDAI SNIFQAAEKL GETEKLSIMI EECGGLDKIE BACU011667/1-605 LMNLLTAKDT KIILVILDAI SNIFQAAEKL GETEKLSIMI EECGGLDKIE 551 600 ENSTTRP00000013250/1-499 ALQNHENESV YKASLSLIEK YFSVE----- ---------- ---------- ENSBTAP00000016216/1-529 ALQNHENESV YKASLNLIEK YFSVEEEEDQ NVVPETTSEG YTFRVQDGSA ENSP00000438483/1-529 ALQNHENESV YKASLSLIEK YFSVEEEEDQ NVVPETTSEG YTFQVQDGAP bmy_06556T0/1-529 ALQNHENESV YKASLNLIEK YFSVEEEEDQ NVVPETTSEG YTFQVQDGTA BACU011667/1-605 ALQNHENESV YKASLNLIEK YFSVEEEEDQ NVVPETTSEG YTFQVQDGAA 601 650 ENSTTRP00000013250/1-499 ----- ENSBTAP00000016216/1-529 GTFSF ENSP00000438483/1-529 GTFNF bmy_06556T0/1-529 GTFNF BACU011667/1-605 GTFNF