KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:37 2014 Check: 00 .. Name: ENSTTRP00000005704/1-469 Len: 502 Check: 1307 Weight: 1.00 Name: bmy_21762T0/1-382 Len: 502 Check: 5021 Weight: 1.00 Name: ENSP00000386105/1-469 Len: 502 Check: 1888 Weight: 1.00 Name: BACU012602/1-469 Len: 502 Check: 9879 Weight: 1.00 Name: ENSBTAP00000016237/1-469 Len: 502 Check: 1003 Weight: 1.00 // 1 50 ENSTTRP00000005704/1-469 ---------- ---------- ---------- ---MFSEQAA QRAHTLLSPP bmy_21762T0/1-382 RGGCRDCKTA FVFFQGPPPP CSGHSGLDTS STDMFSEQAA QRAHTLLSPP ENSP00000386105/1-469 ---------- ---------- ---------- ---MFSEQAA QRAHTLLSPP BACU012602/1-469 ---------- ---------- ---------- ---MFSEQAA QRAHTLLSPP ENSBTAP00000016237/1-469 ---------- ---------- ---------- ---MFSEQAA QRAHTLLSPP 51 100 ENSTTRP00000005704/1-469 SASNATFARV PVVTYTNSSQ PFRLGERNFS RQYAHIYATR LIQMRPFLVS bmy_21762T0/1-382 SASNATFARV PVVTYTNSSQ PFRLGERSFS RQYAHIYATR LIQMRPFLVS ENSP00000386105/1-469 SANNATFARV PVATYTNSSQ PFRLGERSFS RQYAHIYATR LIQMRPFLEN BACU012602/1-469 SASNATFARV PVVTYTNSSQ PFRLGERSFS RQYAHIYATR LIQMRPFLVS ENSBTAP00000016237/1-469 SASNATFARV PVVTYTNSSQ PFRLGERSFS RQYAHIYATR LIQMRPFLVS 101 150 ENSTTRP00000005704/1-469 RAQQRWGNGV LIKKLCELQP GEKCCVVGTL FKAMLLQPSI LREVSEEHNL bmy_21762T0/1-382 RAQQRWGNGV LVKKLCDLQP GEKCCVVGTL FKAMLLQPSI LREVSEEHNL ENSP00000386105/1-469 RAQQHWGSGV GVKKLCELQP EEKCCVVGTL FKAMPLQPSI LREVSEEHNL BACU012602/1-469 RAQQRWGNGV LVKKLCELQP GEKCCVVGTL FKAMLLQPSI LREVSEEHNL ENSBTAP00000016237/1-469 RAQQRWGSGV LVKKLCELQP GEKCCVVGTL FKAMPLQPSI LREVSEEHNL 151 200 ENSTTRP00000005704/1-469 LPQPPRSKYI HADDELILED ELQRIKLAGA IDVAKLVTGT VLAVLGSAGD bmy_21762T0/1-382 LPQPPRSKYI HADDELILED ELQRIKLAGT IDVAKLVTGT VLAVLGSAGD ENSP00000386105/1-469 LPQPPRSKYI HPDDELVLED ELQRIKLKGT IDVSKLVTGT VLAVFGSVRD BACU012602/1-469 LPQPPRSKYI HADDELILED ELQRIKLAGT IDVAKLVTGT VLAVLGSAGD ENSBTAP00000016237/1-469 LPQPPRSKYI HPDDELILED ELQRIKLEGT IDVSKLVTGT VLAVLGSAGD 201 250 ENSTTRP00000005704/1-469 DGKFLVEDHC FAGLAPQKPT RPLDTARFVL LVSGLGLGGG GGESLLGTQL bmy_21762T0/1-382 DGKFLVEDHC FAGLAPQKPT CPLDTDRFVL LVSGLGLGGG GGESLLGTQL ENSP00000386105/1-469 DGKFLVEDYC FADLAPQKPA PPLDTDRFVL LVSGLGLGGG GGESLLGTQL BACU012602/1-469 NGKFLVEDHC FAGLAPQKPT RPLDTDRFVL LVSGLGLGGG GGESLLGTQL ENSBTAP00000016237/1-469 DGKFLVEDHC FAGLAPQKPA CPLDTDRFVL LVSGLGLGGG GGESLLGTQL 251 300 ENSTTRP00000005704/1-469 LVDVVTGQLG DEGEQCSAAH VSRVILAGNL LSHNTQSRDS INKXXXXXXX bmy_21762T0/1-382 LVDVVTGQLG DEGEQCSAAH VSRVILAGNL LSHNTQSRDS INKAKYLTKK ENSP00000386105/1-469 LVDVVTGQLG DEGEQCSAAH VSRVILAGNL LSHSTQSRDS INKAKYLTKK BACU012602/1-469 LVDVVTGQLG DEGEQCSAAH VSRVILAGNL LSHNTQSRDS INKAKYLTKK ENSBTAP00000016237/1-469 LVDVVTGQLG DEGEQCSAAH VSRVILAGNL LSHNTQSRDS INKAKYLTKK 301 350 ENSTTRP00000005704/1-469 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_21762T0/1-382 TQAASVEAVK MLDEILLQLS VS---ELGAG QCSGSG-SLA QQ-------- ENSP00000386105/1-469 TQAASVEAVK MLDEILLQLS ASVPVDVMPG EFDPTNYTLP QQPLHPCMFP BACU012602/1-469 TQAASVEAVK MLDEILLQLS ASVPVDVMPG EFDPTNYTLP QQPLHPCMFP ENSBTAP00000016237/1-469 TQAASVEAVK MLDEILLQLS ASVPVDVMPG EFDPTNYTLP QQPLHPCMFP 351 400 ENSTTRP00000005704/1-469 XXXXXSTLQL VTNPYQATID GVRFLGTSGQ NVSDIFRYSS MEDHLEILEW bmy_21762T0/1-382 LGTG------ ---------- --RWAGEGGL QRGA---YGG --------SW ENSP00000386105/1-469 LATAYSTLQL VTNPYQATID GVRFLGTSGQ NVSDIFRYSS MEDHLEILEW BACU012602/1-469 LATAYSTLQL VTNPYQATID GVRFLGTSGQ NVSDIFRYSS MEDHLEILEW ENSBTAP00000016237/1-469 LATAYSTLQL VTNPYQATID GVRFLGTSGQ NVSDIFRYSS MEDHLEILEW 401 450 ENSTTRP00000005704/1-469 TLQVRHVSPT APDTLGCYPF YNTDPFIFLE CPHVYFCGNT LSFGSKIIRG bmy_21762T0/1-382 ALR------- AP-------- -------LPL CP-------- PGLRAR---G ENSP00000386105/1-469 TLRVRHISPT APDTLGCYPF YKTDPFIFPE CPHVYFCGNT PSFGSKIIRG BACU012602/1-469 TLQVRHISPT APDTLGCYPF YKTDPFIFLE CPHVYFCGNT LSFGSKIIRG ENSBTAP00000016237/1-469 TLQVRHISPT APDTLGCYPF YKTDPFIFPE CPHVYFCGNT PSFGSKIIQG 451 500 ENSTTRP00000005704/1-469 PEDQTVLLVA VPDFSTTQTA CLVNLRSLAC QPISFSGFGA EEEDLGGLDL bmy_21762T0/1-382 RDARRI---- ---------- ---------- ---------- ---------- ENSP00000386105/1-469 PEDQTVLLVT VPDFSATQTA CLVNLRSLAC QPISFSGFGA EDDDLGGLGL BACU012602/1-469 PEDQTVLLVA VPDFSATQTA CLVNLRSLAC QPISFSGFGA EEEDLGGLDL ENSBTAP00000016237/1-469 PEDQTVLLVA VPDFSTTQTA CLVNLRSLAC QPISFSGFGA EDEDLGGLGL 501 550 ENSTTRP00000005704/1-469 GP bmy_21762T0/1-382 -- ENSP00000386105/1-469 GP BACU012602/1-469 GP ENSBTAP00000016237/1-469 GP