KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:38 2014 Check: 00 .. Name: ENSP00000367029/1-419 Len: 559 Check: 8792 Weight: 1.00 Name: ENSTTRP00000007858/1-470 Len: 559 Check: 4593 Weight: 1.00 Name: ENSBTAP00000016250/1-419 Len: 559 Check: 7819 Weight: 1.00 Name: bmy_02846T0/1-279 Len: 559 Check: 8877 Weight: 1.00 Name: BACU017545/1-549 Len: 559 Check: 7396 Weight: 1.00 // 1 50 ENSP00000367029/1-419 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007858/1-470 LAVSSVSPIP LVIPSCQSPS PPSSHLDQD- ---------- ---------- ENSBTAP00000016250/1-419 ---------- ---------- ---------- ---------- ---------- bmy_02846T0/1-279 ---------- ---------- ---------- ---------- ---------- BACU017545/1-549 MRLRAPRRLD ETLLAPPTQL PQSSTVSTSN KRAVSRTSLP MNRIGNVEES 51 100 ENSP00000367029/1-419 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007858/1-470 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016250/1-419 ---------- ---------- ---------- ---------- ---------- bmy_02846T0/1-279 ---------- ---------- ---------- ---------- ---------- BACU017545/1-549 RTSVGQYQKR ARSVRLPGSQ VHARTESPYP EVHRPRRLRR QKEALLPQGG 101 150 ENSP00000367029/1-419 ---------- ---------- ---------- -------MAA EVLPSARWQY ENSTTRP00000007858/1-470 ---------- ------LLQS PLGQDLGLLA IPIPSLPPVD NPFPP--HYS ENSBTAP00000016250/1-419 ---------- ---------- ---------- -------MAS EVFPSARWQY bmy_02846T0/1-279 ---------- ---------- ---------- -------MAA EVLPSARWLY BACU017545/1-549 ARRGHASSGP ERCLRVCLNA LLAPAVSVIG LGVWRGEMAA EVLPSARWLY 151 200 ENSP00000367029/1-419 CGAPDGSQRA VLVQFSNGKL QSPGNMRFTL YENKDSTNPR KRNQRILAAE ENSTTRP00000007858/1-470 CALISFLGCN LTVQFSNGKL QNPGNMRFTL YKSNDSTNPR KRSQRILAAE ENSBTAP00000016250/1-419 CGEPDDSQSA LLVQFSNGRL QNPGNMRFTL YKNNDSTNPR KRSQRILAAE bmy_02846T0/1-279 CGEPDESQRA LLVQFSNGKL QDPGNMRFTL YKSNDSTNPR KRSQRILAAE BACU017545/1-549 CGEPDESQRA LLVQFSNGKL QNPGNMHFTL YKSNDSTNPR KRSQRILAAE 201 250 ENSP00000367029/1-419 TDRLSYVGNN FGTGALKCNT LCRHFVGILN KTSGQMEVYD AELFNMQPLF ENSTTRP00000007858/1-470 TDRLYYVGNN FGTGALKCNT LCRHFVGILN KTSGQMEVYD AELFNMQPLF ENSBTAP00000016250/1-419 TDRLSYVGNN FGTGALKCNT LCRHFVGILN KTSGQMEVYD AELFNMQPLF bmy_02846T0/1-279 TDRLSYVGNN FGTGALKCNT LCRHFVGILN KTSGQMEVYD AELFNMQPLF BACU017545/1-549 TDRLSYVGNN FGTGALKCNT LCRHFVGILN KTSGQMEVYD AELFNMQPLF 251 300 ENSP00000367029/1-419 SDVSVESELA LESQTKTYRE KMDSCIEAFG TTKQKRALNT RRMNRVGNES ENSTTRP00000007858/1-470 SDESVQSEST LESHTKSFRE KMDSCIEAFG TTKEKRALNS RRMNKVGSEC ENSBTAP00000016250/1-419 SDESVESEST PESQAKSFRE KMDSCIEAFG TTKQKRALNS RRMNKVGSES bmy_02846T0/1-279 SDESVQT--- ---------- ---------- ---------- ---------- BACU017545/1-549 SDESVQSEST LESHTKSFRE KMDSCIEAFG TTKQKRALNS RRMNKVGSES 301 350 ENSP00000367029/1-419 LNRAVAKAAE TIIDTKGVTA LVSDAIHNDL QDDSLYLPPC YDDAAKPEDV ENSTTRP00000007858/1-470 LNSAVAKAAE SIIDTKGVTA LVSDAIHDDL QDDSLYLPPC HADAAKPEDV ENSBTAP00000016250/1-419 LNRAVAKAAE NIIDTKGVTA LVSDAIHDDL QDDSVCLPPC HADAAKPEDV bmy_02846T0/1-279 ---------- ---------- LVSDAIHDDL QDDSLYLPPC HADAAKPEDV BACU017545/1-549 LNSAVAKAAE SIIDTKGVTA LVSDAIHDDL QDDSLYLPPC HADAAKPEDV 351 400 ENSP00000367029/1-419 YKFEDLLSPA EYEALQSPSE AFRNVTSEEI LKMIEENSHC TFVIEA---L ENSTTRP00000007858/1-470 YKFEDLLSPA EYDALQSPSE AFRNVTSEEI LKMIEENSHC SFVIEALKSL ENSBTAP00000016250/1-419 YKFEDLLSPV EYDALQSPSE AFRNVTSEEI LKMIEENSHC SFVIEA---L bmy_02846T0/1-279 YKFEDR---- ---------- ---------- ---------- ---------- BACU017545/1-549 YKFEDRI--- ----LLSPSE AFRNVTSEEI LKMIEENSHC SFVIEA---L 401 450 ENSP00000367029/1-419 KSLPSDVESR DRQARCIWFL DTLIKFRAHR VVKRKSALGP GVPHIINTKL ENSTTRP00000007858/1-470 KSLPSSEESR DRQARCIWFL DTLIRFRAQK VIKRKRALGP GVPHIINTKL ENSBTAP00000016250/1-419 KSLPSNEESR DRQARCIWYL DALIKFRAQK VIKRKSALGP GVPHIINTKL bmy_02846T0/1-279 ---------- ---------- ---------- ------ALGP GIPHIINTKL BACU017545/1-549 KSLPSSEESR DRQARCIWFL DTLIRFRAQK VIKRKSALGP GIPHIINTKL 451 500 ENSP00000367029/1-419 LKHFTCLTYN NGRLRNLISD SMKAKITAYV IILALHIHDF QIDLTVLQRD ENSTTRP00000007858/1-470 LKHFTCLIYN NGSLRNLISD SMKAKITAYV IILALHINDF QIDLTVLQRD ENSBTAP00000016250/1-419 LKQFTCLTYN NGSLRNLISD SMKAKITAYV IVLALHINGF QIDLTMLQRD bmy_02846T0/1-279 LKQFTCLIYN NGSLRNLISD SMKAKITAYV IILALHINGF QIDLTVLQRD BACU017545/1-549 LKQFTCLIYN NGSLRNLISD SMKAKITAYV IILALHINSF QIDLTVLQRD 501 550 ENSP00000367029/1-419 LKLSEKRMME IAKAMRLKIS KRRVSVAAGS EEDHKLGTLS LPLPPAQTSD ENSTTRP00000007858/1-470 LKLSEKRMME IAKAMRLKIS KRRVSLAVGR EEDHKLGTLS IPLPPAQALD ENSBTAP00000016250/1-419 LKLSEKRMME IAKAMRLKIS KRKVSLAAGG EEEHRLGTLS IPLPPAQSLD bmy_02846T0/1-279 LKLSEKRMME IAKAMRLKIS KRRVSLAVGR EEDHKLGTLS IPLPPAQALD BACU017545/1-549 LKLSEKRMME IAKAMRLKIS KRRVSLAVGR EEDHKLGTLS IPLPPAQALD 551 600 ENSP00000367029/1-419 RLAKRRKIT ENSTTRP00000007858/1-470 RQSKRRKIT ENSBTAP00000016250/1-419 RQSKRRKMT bmy_02846T0/1-279 RQSKRRKIT BACU017545/1-549 RQSKRRKIT