KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:39 2014 Check: 00 .. Name: ENSTTRP00000014304/1-854 Len: 877 Check: 5898 Weight: 1.00 Name: ENSBTAP00000016254/1-877 Len: 877 Check: 1203 Weight: 1.00 Name: bmy_10782T0/1-857 Len: 877 Check: 8723 Weight: 1.00 Name: ENSP00000362300/1-857 Len: 877 Check: 7943 Weight: 1.00 // 1 50 ENSTTRP00000014304/1-854 MEAGPSG--- ---------- -------AAA GTYL-PLQQV FQAPRRPGIG ENSBTAP00000016254/1-877 HARKSCAFSD LSGKEITRLY PHQAFCLVAA GAYLPPLQQV FQAPRRPGIG bmy_10782T0/1-857 MEAGPSG--- ---------- -------AAA GAYLPPLQQV FQAPRRPGIG ENSP00000362300/1-857 MEAGPSG--- ---------- -------AAA GAYLPPLQQV FQAPRRPGIG 51 100 ENSTTRP00000014304/1-854 TVGKPIKLLA NYFEVDIPKI DVYHYEVDIK PDKCPRRVNR EVVEYMVQHF ENSBTAP00000016254/1-877 TVGKPIKLLA NYFEVDIPKI DVYHYEVDIK PDKCPRRVNR EVVEYMVQHF bmy_10782T0/1-857 TVGKPIKLLA NYFEVDIPKI DVYHYEVDIK PDKCPRRVNR EVVEYMVQHF ENSP00000362300/1-857 TVGKPIKLLA NYFEVDIPKI DVYHYEVDIK PDKCPRRVNR EVVEYMVQHF 101 150 ENSTTRP00000014304/1-854 KPQIFGDRKP VYDGKKNIYT VTALPIGNER VDFEVTIPGE GKDRIFKVSI ENSBTAP00000016254/1-877 KPQIFGDRKP VYDGKKNIYT VTALPIGNER VDFEVTIPGE GKDRIFKVSI bmy_10782T0/1-857 KPQIFGDRKP VYDGKKNIYT VTALPIGNER VDFEVTIPGE GKDRIFKVSI ENSP00000362300/1-857 KPQIFGDRKP VYDGKKNIYT VTALPIGNER VDFEVTIPGE GKDRIFKVSI 151 200 ENSTTRP00000014304/1-854 KWLAIVSWRM LHEALVSGQI PVPLESVQAL DVAMRHLASM RYTPVGRSFF ENSBTAP00000016254/1-877 KWLAIVSWRM LHEALVSGQI PVPLESVQAL DVAMRHLASM RYTPVGRSFF bmy_10782T0/1-857 KWLAIVSWRM LHEALVSGQI PVPLESVQAL DVAMRHLASM RYTPVGRSFF ENSP00000362300/1-857 KWLAIVSWRM LHEALVSGQI PVPLESVQAL DVAMRHLASM RYTPVGRSFF 201 250 ENSTTRP00000014304/1-854 SPPEGYYHPL GGGREVWFGF HQSVRPAMWK MMLNIDVSAT AFYKAQPVIE ENSBTAP00000016254/1-877 SPPEGYYHPL GGGREVWFGF HQSVRPAMWK MMLNIDVSAT AFYKAQPVIE bmy_10782T0/1-857 SPPEGYYHPL GGGREVWFGF HQSVRPAMWK MMLNIDVSAT AFYKAQPVIE ENSP00000362300/1-857 SPPEGYYHPL GGGREVWFGF HQSVRPAMWK MMLNIDVSAT AFYKAQPVIE 251 300 ENSTTRP00000014304/1-854 FMCEVLDIRN IDEQPKPLTD SQRVRFTKEI KGLKVEVTHC GQMKRKYRVC ENSBTAP00000016254/1-877 FMCEVLDIRN IDEQPKALTD SQRVRFTKEI KGLKVEVTHC GQMKRKYRVC bmy_10782T0/1-857 FMCEVLDIRN IDEQPKPLTD SQRVRFTKEI KGLKVEVTHC GQMKRKYRVC ENSP00000362300/1-857 FMCEVLDIRN IDEQPKPLTD SQRVRFTKEI KGLKVEVTHC GQMKRKYRVC 301 350 ENSTTRP00000014304/1-854 NVTRRPASHQ TFPLQLESGQ TVECTVAQYF KQKYNLQLKY PHLPCLQVGQ ENSBTAP00000016254/1-877 NVTRRPASHQ TFPLQLESGQ TVECTVAQYF KQKYNLQLKY PHLPCLQVGQ bmy_10782T0/1-857 NVTRRPASHQ TFPLQLESGQ TVECTVAQYF KQKYNLQLKY PHLPCLQVGQ ENSP00000362300/1-857 NVTRRPASHQ TFPLQLESGQ TVECTVAQYF KQKYNLQLKY PHLPCLQVGQ 351 400 ENSTTRP00000014304/1-854 EQKHTYLPLE VCNIVAGQRC IKKLTDNQTS TMIKATARSA PDRQEEISRL ENSBTAP00000016254/1-877 EQKHTYLPLE VCNIVAGQRC IKKLTDNQTS TMIKATARSA PDRQEEISRL bmy_10782T0/1-857 EQKHTYLPLE VCNIVAGQRC IKKLTDNQTS TMIKATARSA PDRQEEISRL ENSP00000362300/1-857 EQKHTYLPLE VCNIVAGQRC IKKLTDNQTS TMIKATARSA PDRQEEISRL 401 450 ENSTTRP00000014304/1-854 MKNASYNLDP YIQEFGIKVK DDMTEVTGRV LPAPILQYGG RNRAIATPNQ ENSBTAP00000016254/1-877 MKNASYNLDP YIQEFGIKVK DDMTEVTGRV LPAPILQYGG RNRAIATPNQ bmy_10782T0/1-857 MKNASYNLDP YIQEFGIKVK DDMTEVTGRV LPAPILQYGG RNRAIATPNQ ENSP00000362300/1-857 MKNASYNLDP YIQEFGIKVK DDMTEVTGRV LPAPILQYGG RNRAIATPNQ 451 500 ENSTTRP00000014304/1-854 GVWDMRGKQF YNGIEIKVWA IACFAPQKQC REEVLKNFTD QLRKISKDAG ENSBTAP00000016254/1-877 GVWDMRGKQF YNGIEIKVWA IACFAPQKQC REEVLKNFTD QLRKISKDAG bmy_10782T0/1-857 GVWDMRGKQF YNGIEIKVWA IACFAPQKQC REEVLKNFTD QLRKISKDAG ENSP00000362300/1-857 GVWDMRGKQF YNGIEIKVWA IACFAPQKQC REEVLKNFTD QLRKISKDAG 501 550 ENSTTRP00000014304/1-854 MPIQGQPCFC KYAQGADSVE PMFRHLKNTY SGLQLIIVIL PGKTPVYAEV ENSBTAP00000016254/1-877 MPIQGQPCFC KYAQGADSVE PMFRHLKNTY SGLQLIIVIL PGKTPVYAEV bmy_10782T0/1-857 MPIQGQPCFC KYAQGADSVE PMFRHLKNTY SGLQLIIVIL PGKTPVYAEV ENSP00000362300/1-857 MPIQGQPCFC KYAQGADSVE PMFRHLKNTY SGLQLIIVIL PGKTPVYAEV 551 600 ENSTTRP00000014304/1-854 KRVGDTLLGM ATQCVQVKNV VKTSPQTLSN LCLKINVKLG GINNILVPHQ ENSBTAP00000016254/1-877 KRVGDTLLGM ATQCVQVKNV VKTSPQTLSN LCLKINVKLG GINNILVPHQ bmy_10782T0/1-857 KRVGDTLLGM ATQCVQVKNV VKTSPQTLSN LCLKXNVKLG GINNILVPHQ ENSP00000362300/1-857 KRVGDTLLGM ATQCVQVKNV VKTSPQTLSN LCLKINVKLG GINNILVPHQ 601 650 ENSTTRP00000014304/1-854 RSAVFQQPVI FLGADVTHPP AGDGKKPSIT AXXXXXXXXX XXYCATVRVQ ENSBTAP00000016254/1-877 RSAVFQQPVI FLGADVTHPP AGDGKKPSIT AVVGSMDAHP SRYCATVRVQ bmy_10782T0/1-857 RSAVFQQPVI FLGADVTHPP AGDGKKPSIT AVVGSMDAHP SRYCATVRVQ ENSP00000362300/1-857 RSAVFQQPVI FLGADVTHPP AGDGKKPSIT AVVGSMDAHP SRYCATVRVQ 651 700 ENSTTRP00000014304/1-854 RPRQEIIEDL --MVRELLIQ FYKSTRFKPT RIIFYRDGVP EGQLPQILHY ENSBTAP00000016254/1-877 RPRQEIIEDL SYMVRELLIQ FYKSTRFKPT RIIFYRDGVP EGQLPQILHY bmy_10782T0/1-857 RPRQEIIEDL SYMVRELLIQ FYKSTRFKPT RIIFYRDGVP EGQLPQILHY ENSP00000362300/1-857 RPRQEIIEDL SYMVRELLIQ FYKSTRFKPT RIIFYRDGVP EGQLPQILHY 701 750 ENSTTRP00000014304/1-854 ELLAIRDACI KLEKDYQPGI TYIVVQKRHH TRLFCADKNE RIGKSGNIPA ENSBTAP00000016254/1-877 ELLAIRDACI KLEKDYQPGI TYIVVQKRHH TRLFCADKNE RIGKSGNIPA bmy_10782T0/1-857 ELLAIRDACI KLEKDYQPGI TYIVVQKRHH TRLFCADKNE RIGKSGNIPA ENSP00000362300/1-857 ELLAIRDACI KLEKDYQPGI TYIVVQKRHH TRLFCADKNE RIGKSGNIPA 751 800 ENSTTRP00000014304/1-854 GTTVDTNITH PFEFDFYLCS HAGIQGTSRP SHYYVLWDDN RFTADELQIL ENSBTAP00000016254/1-877 GTTVDTNITH PFEFDFYLCS HAGIQGTSRP SHYYVLWDDN RFTADELQIL bmy_10782T0/1-857 GTTVDTNITH PFEFDFYLCS HAGIQGTSRP SHYYVLWDDN RFTADELQIL ENSP00000362300/1-857 GTTVDTNITH PFEFDFYLCS HAGIQGTSRP SHYYVLWDDN RFTADELQIL 801 850 ENSTTRP00000014304/1-854 TYQLCHTYVR CTRSVSIPAP AYYARLVAFR ARYHLVDKEH DSGEGSHISG ENSBTAP00000016254/1-877 TYQLCHTYVR CTRSVSIPAP AYYARLVAFR ARYHLVDKEH DSGEGSHISG bmy_10782T0/1-857 TYQLCHTYVR CTRSVSIPAP AYYARLVAFR ARYHLVDKEH DSGEGSHISG ENSP00000362300/1-857 TYQLCHTYVR CTRSVSIPAP AYYARLVAFR ARYHLVDKEH DSGEGSHISG 851 900 ENSTTRP00000014304/1-854 QSNGRDPQAL AKAVQVHQDT LRTMYFA ENSBTAP00000016254/1-877 QSNGRDPQAL AKAVQVHQDT LRTMYFA bmy_10782T0/1-857 QSNGRDPQAL AKAVQVHQDT LRTMYFA ENSP00000362300/1-857 QSNGRDPQAL AKAVQVHQDT LRTMYFA