KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:40 2014 Check: 00 .. Name: ENSP00000368793/1-445 Len: 447 Check: 3338 Weight: 1.00 Name: ENSBTAP00000016261/1-447 Len: 447 Check: 8944 Weight: 1.00 Name: bmy_17448T0/1-311 Len: 447 Check: 3613 Weight: 1.00 Name: BACU019707/1-446 Len: 447 Check: 8605 Weight: 1.00 Name: ENSTTRP00000009834/1-446 Len: 447 Check: 8405 Weight: 1.00 // 1 50 ENSP00000368793/1-445 -MNRHLCVWL FRHPSLNGYL QCHIQLHSHQ FRQIHLDTRL QVFRQNRNCI ENSBTAP00000016261/1-447 MNRRHLFAWL FRHLSLNGHL QCHVHRHSHQ LTQIPLDTRL WVFRRNRNHT bmy_17448T0/1-311 -MNRHLFVWL FRHPCLNGHH QCHVHLHSHQ LTQIPLDTRL WVFRRNKNHI BACU019707/1-446 -MNRHLFVWL FRHPCLNGHH QCHVHLHSHQ LTQTPLDTRL WVFRRNKNHI ENSTTRP00000009834/1-446 -MNRHLFVWL FRHPCLNGHH QCHVHLHSHQ LTQIPLDTRL WVFRRNRNHI 51 100 ENSP00000368793/1-445 LH-LLSKNWS RRYCHQDTKM LWKHKALQKY MENLSKEYQT LEQCLQHIPV ENSBTAP00000016261/1-447 VHRLLNKNCS RRYCHQDTSM LWKHKALQKY MEDLNKEYQT LDHCLHHISA bmy_17448T0/1-311 LHCLLSENWS RRYCHQDTRM LWKHKALQKY MEDLSKEYQT LDHCLQHISV BACU019707/1-446 LHCLLRENWS RRYCHQDTRM IWKHRALQKY MEDLNKEYQT LDHCLQHISV ENSTTRP00000009834/1-446 LHCLLSENWS RRYCHQDTRM LWKHKGLQKY MEDLSKEYQT LDHCLQHISV 101 150 ENSP00000368793/1-445 NEENRRSLNR RHAELAPLAA IYQEIQETEQ AIEELESMCK SLNKQDEKQL ENSBTAP00000016261/1-447 SEGDRRSLTR RHAELAPLAV IYKEIQEAEQ AIEELESMCK SLNKQDEKQL bmy_17448T0/1-311 SEGERRSLNQ RHAELAPLAV IYKEIQEAEQ AIEELESMCK SLNKQDEKQL BACU019707/1-446 SEGDRRSLNQ RHAELAPLAV IYKEIQEAEQ AIEELESMCK SLNKQDEKQL ENSTTRP00000009834/1-446 SEGDRRSLNQ RHAELAPLAV IYKEIQEAEQ AIEELESMCK SLNKEDEKQL 151 200 ENSP00000368793/1-445 QELALEERQT IDQKINMLYN ELFQSLVPKE KYDKNDVILE VTAGRTTGGD ENSBTAP00000016261/1-447 QELALEERQT IAQKINMLYS ELFQSLLPKE KYDKNDVILE VTSGRTTGGD bmy_17448T0/1-311 QELALEERQT ILQKINMLYS ELLQSLVPKE KYDKNDVILE VTSGRTTGGD BACU019707/1-446 QELALEERQT ILQKINMLYS ELLQNLVPKE KYDKNDVILE VTSGRTTGGD ENSTTRP00000009834/1-446 QELALEERQT ILQKINMLYS ELLQSLVPKE KYDKNDVILE VTSGRTTGGD 201 250 ENSP00000368793/1-445 ICQQFTREIF DMYQNYSCYK HWQFELLNYT PADYGGLHHA AARISGDGVY ENSBTAP00000016261/1-447 ICQQFTREIF DMYQNYSSYK HWRFELLNYT PADYGGLHHA AARISGDNVY bmy_17448T0/1-311 ICQQFTREIF DMYQNYSSYK HWKFELLNYT PADYGGLHHA AARISGDSVY BACU019707/1-446 ICQQFTREIF DMYQNYSSYK HWKFELLNYT PADYGGLHHA AARISGDNVY ENSTTRP00000009834/1-446 ICQQFTREIF DMYQNYSSYK HWKFELLNYT PADYGGLHHA AARISGDNVY 251 300 ENSP00000368793/1-445 KHLKYEGGIH RVQRIPEVGL SSRMQRIHTG TMSVIVLPQP DEVDVKLDPK ENSBTAP00000016261/1-447 KHLKYEGGIH RVQRIPEVGL SSRMQRIHTG TMSVIVLPHP DEVDVKVDPK bmy_17448T0/1-311 KHLKYEGGIH RVQRIPEVGL SSRMQRIHTG TMSVIVLPQP DEVTSYLNS- BACU019707/1-446 KHLKYEGGIH RVQRIPEVGL SSRMQRIHTG TMSVIVLPQP DEVDVKVDPK ENSTTRP00000009834/1-446 KHLKYEGGIH RVQRIPEVGL SSRMQRIHTG TMSVIVLPQP DEVDVKVDPK 301 350 ENSP00000368793/1-445 DLRIDTFRAK GAGGQHVNKT DSAVRLVHIP TGLVVECQQE RSQIKNKEIA ENSBTAP00000016261/1-447 DLRIDTFRAK GAGGQHVNTT DSAVRLVHIP TGLVVECQQE RSQIKNKEIA bmy_17448T0/1-311 ---------- ---------- --------IP LSMKIN---- ---------- BACU019707/1-446 DLRIDTFRAK GAGGQHVNTT DSAVRLVHVP TGLVVECQQE RSQIKNKEIA ENSTTRP00000009834/1-446 DLRIDTFRAK GAGGQHVNTT DSAVRLVHVP TGLVVECQQE RSQIKNKEIA 351 400 ENSP00000368793/1-445 FRVLRARLYQ QIIEKDKRQQ QSARKLQVGT RAQSERIRTY NFTQDRVSDH ENSBTAP00000016261/1-447 LRVLRARLYQ QIIEKDKCQQ RSARKLQVGT RAQSERIRTY NFTQDRVTDH bmy_17448T0/1-311 ---------- ---------- ---------- ---------- ---------- BACU019707/1-446 LRVLRARLYQ QIIEKDKCQQ RSVRKLQVGT RAQSERIRTY NFTQDRVTDH ENSTTRP00000009834/1-446 LRVLRARLYQ QIIEKDKCQQ QSVRKLQVGT RAQSERIRTY NFTQDRVTDH 401 450 ENSP00000368793/1-445 RIAYEVRDIK EFLCGGKGLD QLIQRLLQSA DEEAIAELLD EHLKSAK ENSBTAP00000016261/1-447 RIAYEVRNIK EFLCGEKCLD QLIQRLLQSA DEEAITEFLD ENLKSVK bmy_17448T0/1-311 ---------Q NFIV------ ---------- ---------- ------- BACU019707/1-446 RIAYEVRNIK EFLCGEKCLD QLIQRLLQSA DEETINEFLD ENLKSAK ENSTTRP00000009834/1-446 RIAYEVRNIK EFLCGEKCLD QLIQRLLQSA DEETINEFLD ENLKSAK