KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:40 2014 Check: 00 .. Name: ENSP00000225573/1-261 Len: 261 Check: 5858 Weight: 1.00 Name: ENSBTAP00000016263/1-261 Len: 261 Check: 6142 Weight: 1.00 Name: bmy_09817T0/1-226 Len: 261 Check: 3759 Weight: 1.00 Name: BACU010364/1-261 Len: 261 Check: 6861 Weight: 1.00 Name: ENSTTRP00000011855/1-261 Len: 261 Check: 7815 Weight: 1.00 // 1 50 ENSP00000225573/1-261 MTCWLRGVTA TFGRPAEWPG YLSHLCGRSA AMDLGPMRKS YRGDREAFEE ENSBTAP00000016263/1-261 MIFWLRSVIV TFGRPAEWPR CLRHLCSRGA AMDLGPMRKT YRGDPEAFEE bmy_09817T0/1-226 MTFGLRGVIV TFGRPAEWPR CLRHLCSRGA VMDLGPMRKG YRGDR----- BACU010364/1-261 MTFGLRGVIV TFGRPAEWPR CLRHLCSRGA VMDLGPMRKG YRGDQEAFEE ENSTTRP00000011855/1-261 MTFGLRGVIV TFGRPAEWPR CLRHLCSRGA VMDLGPMRKS YRGDREAFEE 51 100 ENSP00000225573/1-261 THLTSLDPVK QFAAWFEEAV QCPDIGEANA MCLATCTRDG KPSARMLLLK ENSBTAP00000016263/1-261 THLTSLDPVK QFAAWFEEAV QCPDIMEANA MCLATCTRDG KPSARMVLLK bmy_09817T0/1-226 ---------- ------EEAV QCPDIGEANA MCLATCTRDG KPSARMVLLK BACU010364/1-261 TQLTSLNPMK QFAAWFEEAV QCPDIGEANA MCLATCTRDG KPSARMVLLK ENSTTRP00000011855/1-261 TQLTSLNPMK QFAAWFEEAV QCPDIGEANA MCLATCTRDG KPSARMVLLK 101 150 ENSP00000225573/1-261 GFGKDGFRFF TNFESRKGKE LDSNPFASLV FYWEPLNRQV RVEGPVKKLP ENSBTAP00000016263/1-261 GFGKDGFRFF TNFESRKGKE LDSNPFASLV FYWEPLHRQV RVEGPVKKLP bmy_09817T0/1-226 GFGKDGFRFF TNFESRKGQE LDSNPFASLV FYWEPLNRQV RVEGPVKKLP BACU010364/1-261 GFGKDGFRFF TNFESRKGQE LDSNPFASLV FYWEPLNRQV RVEGPVKKLP ENSTTRP00000011855/1-261 GFGKDGFRFF TNFESRKGQE LDSNPFASLV FYWEPLNRQV RVEGPVKKLP 151 200 ENSP00000225573/1-261 EEEAECYFHS RPKSSQIGAV VSHQSSVIPD REYLRKKNEE LEQLYQDQEV ENSBTAP00000016263/1-261 EEEAECYFHS RPKSSQIGAV VSHQSSVIPD REYLRKKNKE LEQLYQEQEV bmy_09817T0/1-226 EEEAECYFHS RPKSSQIGAV VSHQSSVIPD RE-------- ------STEA BACU010364/1-261 EEEAECYFHS RPKSSQIGAV VSHQSSVIPD REYLRKKNEE LEQLYQEQEV ENSTTRP00000011855/1-261 EEEAECYFHS RPKSSQIGAV VSHQSSVIPD REYLRKKNEE LEQLYQEQEV 201 250 ENSP00000225573/1-261 PKPKSWGGYV LYPQVMEFWQ GQTNRLHDRI VFRRGLPTGD SPLGPMTHRG ENSBTAP00000016263/1-261 PKPKYWGGYI LYPQVMEFWQ GQTNRLHDRI VFRRGLLTGD SPLGPMTHRG bmy_09817T0/1-226 SASPCRGGYI LYPQVMEFWQ GQTNRLHDRI AFRRGLPTGD SPLGPMTHRG BACU010364/1-261 PKPKYWGGYI LYPQVMEFWQ GQTNRLHDRI AFRRGLPTGD SPLGPMTHRG ENSTTRP00000011855/1-261 PKPKYWGGYT LYPQVMEFWQ GQTNRLHDRI AFRRGLPTGD SPLGPMTHRG 251 300 ENSP00000225573/1-261 EEDWLYERLA P ENSBTAP00000016263/1-261 EEDWVYERLA P bmy_09817T0/1-226 EEDWLYERLA P BACU010364/1-261 EEDWLYERLA P ENSTTRP00000011855/1-261 EEDWLYERLA P