KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:41 2014 Check: 00 .. Name: ENSP00000338769/1-903 Len: 907 Check: 6585 Weight: 1.00 Name: ENSBTAP00000016266/1-904 Len: 907 Check: 2752 Weight: 1.00 Name: BACU005769/1-831 Len: 907 Check: 7102 Weight: 1.00 Name: bmy_04543T0/1-631 Len: 907 Check: 8104 Weight: 1.00 Name: ENSTTRP00000007376/1-821 Len: 907 Check: 3343 Weight: 1.00 // 1 50 ENSP00000338769/1-903 MPEQFSVAEF LAVTAEDLSS PAGAAAFAAK MPRYRGAALA REEILEGDQA ENSBTAP00000016266/1-904 MPEQLSVAEF LAVTAEDLSS PAGAAAFAAK MPRCRGAALA REEMLEGDQA BACU005769/1-831 ---------- ---------- ---------- ---------- --MMLEGDQA bmy_04543T0/1-631 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007376/1-821 ---------- ---------- ---------- ---------- ---MLEGDQA 51 100 ENSP00000338769/1-903 ILQRIKKAVR AIHSSGLGHV ENEEQYREAV ESLGNSHLSQ NSHELSTGFL ENSBTAP00000016266/1-904 ILQRIKKAVR AIHSSGLGHV ENEEQYREAV ESLGNSHLSQ NSHELSTGFL BACU005769/1-831 ILQRIKKAVR AIHSSGLGHV ENEEQYREAV ESLGNSHLSQ NSHELSTGFL bmy_04543T0/1-631 ---------- ---------- MSEEQ----- ---------- ---------- ENSTTRP00000007376/1-821 ILQRIKKAVR AIHSFGLXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000338769/1-903 NLAVFTREVA ALFKNLIQNL NNIVSFPLDS LMKGQLRDGR QDSKKQLEKA ENSBTAP00000016266/1-904 NLAVFTREVA ALFKNLVQNL NNIVSFPLDT LLKGQLRDGR QDSKKQLEKA BACU005769/1-831 NLAVFTREVA ALFKNLVQNL NNIVSFPLDS LLKGQLRDGR QDSKKQLEKA bmy_04543T0/1-631 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007376/1-821 XXXXXXXXXX XXXXXXVQNL NNIVSFPLDS LLKGQLRDGR QDSKKQLEKA 151 200 ENSP00000338769/1-903 WKDYEAKMAK LEKERDRARV TGGIPGEVAQ DMQRERRIFQ LHMCEYLLKA ENSBTAP00000016266/1-904 WKDYEAKMAR LEKERDRARV IGGSTGEVAQ DTQRERRVFQ LHMCEYLLKA BACU005769/1-831 WKDYEAKMAR LEKERDRARV TGGSAGEVAQ DTQRERRVFQ LHMCEYLLKA bmy_04543T0/1-631 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007376/1-821 WKDYEAKXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXYLLKA 201 250 ENSP00000338769/1-903 GESQMKQGPD FLQSLIKFFH AQHNFFQDGW KAAQSLFPFI EKLAASVHAL ENSBTAP00000016266/1-904 GESQMKQGPD FLQSLIKFFH AQHNFFQDGL KAAQSLSPFI EKLAVSVHTL BACU005769/1-831 GESQMKQGPD FLQSLIKFFH AQHNFFQDGW KAAQSLSPFI EKLAASVHAL bmy_04543T0/1-631 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007376/1-821 GESQMKQGPD FLQSLIKFFH AQHNFFQDGW KAAQSLSPFI EKLAASVHAL 251 300 ENSP00000338769/1-903 HQAQEDELQK LTQLRDSLRG TLQLESRE-- EHLSRKNSGC GYSIHQHQGN ENSBTAP00000016266/1-904 RQAQEEELQK LTQLRDSLRG TLQLESRE-- ESLSRKNSGG GYSIHQHQGN BACU005769/1-831 HQAQEEELQK LTQLRDSLRG TLQLESREEQ ETLSRKNSGG GYSIHQHQGN bmy_04543T0/1-631 ---------- ---------- ---------- ETLSRKNSGG GYSIHQHQGN ENSTTRP00000007376/1-821 HQAQEEELQK LTQLRDSLRG TLQLESRE-- ETLSRKNSGG GYSIHQQQGN 301 350 ENSP00000338769/1-903 KQFGTEKVGF LYKKSDGIRR VWQKRKCGVK YGCLTISHST INRPPVKLTL ENSBTAP00000016266/1-904 KQFGTEKVGF LYKKSDGIRR VWQKRKCGVK YGCLTISHST INRPPVKLTL BACU005769/1-831 KQFGTEK--- ---------- ---------- ---------- INRPPVKLTL bmy_04543T0/1-631 KQFGTEKVGF LYKKSDGIRR VWQKRKCGVK YGCLTISHST INRPPVKLTL ENSTTRP00000007376/1-821 KQFGTEKVGF LYKKSDGIRR VWQKRKCGVK YGCLTISHST INRPPVKLTL 351 400 ENSP00000338769/1-903 LTCQVRPNPE EKKCFDLVTH NRTYHFQAED EHECEAWVSV LQNSKDEALS ENSBTAP00000016266/1-904 LTCQVRPNPE EKKCFDLVTH NRTYHFQAED EHECEAWVSV LQNSKDEALS BACU005769/1-831 LTCQVRPNPE EKKCFDLVTH NRTYHFQAED EHECEAWVSV LQNSKDEALS bmy_04543T0/1-631 LTCQVRPNPE EKKCFDLVTH NRTYHFQAED EHECEAWVSV LQNSKDEALS ENSTTRP00000007376/1-821 LTCQVRPNPE EKKCFDLVTH NRTYHFQAED EHECEAWVSV LQNSKDEALS 401 450 ENSP00000338769/1-903 SAFLGEPSAG PGSWGSAGHD GEPHDLTKLL IAEVKSRPGN SQCCDCGAAD ENSBTAP00000016266/1-904 SAFLGEPGSG PGPWGAAGLD GEPQDLTKLL IAEVKSRPGN GQCCDCGAAD BACU005769/1-831 SAFLGDPSGG PGPWGGAGLD GEPQDLTKLL IAEVKSRPGN GQCCDCGAAD bmy_04543T0/1-631 SAFLGEPSGG PGPWGCAGLD GEPQDLTKLL IAEVKSRPGN GQCCDCGAAD ENSTTRP00000007376/1-821 SAFLGEPSGG PGPWGGAGLD GEPQDLTKLL IAEVKSRPGN GQCCDCGAAD 451 500 ENSP00000338769/1-903 PTWLSTNLGV LTCIQCSGVH RELGVRFSRM QSLTLDLLGP SELLLALNMG ENSBTAP00000016266/1-904 PTWLSTNLGV LTCIQCSGVH RELGVRFSRI QSLTLDLLGP SELLLALNIG BACU005769/1-831 PTWLSTNLGV LTCIQCSGVH RELGVRFSRM QSLTLDLLGP SELLLALNIG bmy_04543T0/1-631 PTWLSTNLGV LTCIQCSGVH RELGVRFSRM QSLTLDLLGP SELLLALNIG ENSTTRP00000007376/1-821 PTWLSTNLGV LTCIRCSGVH RELGVRFSRM QSLTLDLLGP SELLLALNIG 501 550 ENSP00000338769/1-903 NTSFNEVMEA QLPSHGGPKP SAESDMGTRR DYIMAKYVEH RFARRCTPEP ENSBTAP00000016266/1-904 NTRFNEVMEA QLPSHGGPKP SAESDMSARR DYIVAKYVEH RFARRSTPEP BACU005769/1-831 NTRFNEVMEA QLPSHGGPKP STESDMSTRR DYIVAKYVEH RFARRSTPEP bmy_04543T0/1-631 NTRFNEVMEA QLPSHGGPKP STESDMSTRR DYIVAKYVEH RFARRSTPEP ENSTTRP00000007376/1-821 NTRFNEVMEA QLPSHGGPKP STESDMSTRR DYIVAKYVEH RFARRSTPEP 551 600 ENSP00000338769/1-903 QRLWTAICNR DLLSVLEAFA NGQDFGQPLP GPDAQAPEEL VLHLAVKVAN ENSBTAP00000016266/1-904 QRLCTAICNR DLLSVLEAFA NGQDFGQPLP GPEGQAPGEL ALHLAVRVAN BACU005769/1-831 QRLWMAICNR DLLSVLEAFA NGQDFGQPLP GPEGQAPGEL ALHLAVRVTN bmy_04543T0/1-631 QRLWMAICNR DLLSVLEAFA NGQDFGQPLP GPEGQAPGEL ALHLAVRVTN ENSTTRP00000007376/1-821 QRLWMAICNR DLLSVLEAFA NGQDFGQPLP GPEGQAPGEL ALHLAVRVTN 601 650 ENSP00000338769/1-903 QASLPLVDFI IQNGGHLDAK AADGNTALHY AALYNQPDCL KLLLKGRALV ENSBTAP00000016266/1-904 QASLPLVDFI IQNGGHLDAK AADGNSALHC AVFYNQLDCL KLLLKGRASV BACU005769/1-831 QASLPLVDFI IQNGGHLDAK AADGNSALHC AALYNQPDCL KLLLKGRASV bmy_04543T0/1-631 QASLPLVDFI IQNGGHLDAK AADGNSALHC AALYNQPDCL KLLLKGRASV ENSTTRP00000007376/1-821 QASLPLVDFI IQN------- ---------- ---------- ---------- 651 700 ENSP00000338769/1-903 GTVNEAGETA LDIARKKHHK ECEELLEQAQ AGTFAFPLHV DYSWVISTEP ENSBTAP00000016266/1-904 ATVNEAGETA LDIARRKQHK ECENLLEQAQ AGTLTFPLHL DYAWGISTEP BACU005769/1-831 GTVNEAGETA LDIARKKQHK ECEELLEQAH AGTLAFPLHL DYPWGISTEP bmy_04543T0/1-631 GTVNEAGETA LDIARKKQHK ECEELLEQAH AGTLTFPLHL DYPWGISTEP ENSTTRP00000007376/1-821 ---NEAGETA LDIARKKQHK ECEDLLEQAH AGTLAFPLHL DYPWGISTEP 701 750 ENSP00000338769/1-903 GSDSEEDEEE K-RCLLKLPA QAHWASGRLD ISNKTYETVA SLGAATPQGE ENSBTAP00000016266/1-904 GSDSEEDEEE KQRCALKPPA QARWTSGRLD ISNKTYETIT SLGPAAPKSQ BACU005769/1-831 GSDSEEDEEE KQRCPLKPPA QVRWASGRLD ISNKTYETIA SLGPAAPKIQ bmy_04543T0/1-631 GSDSEEDEEE K-RCPLKPPA QVRWASGRLD ISNKTYETIA SLGPAAPKIQ ENSTTRP00000007376/1-821 GSDSEEDEEE K-RCPLKPPA QVRWASGRLD ISNKTYETIA SLGPAAPKIQ 751 800 ENSP00000338769/1-903 SEDCPPPLPV KNSSRTLVQG CARHASGDRS EVSSLSSEAP ETPESLGSPA ENSBTAP00000016266/1-904 SEDCPPPLPV KNLSRTMAQG RVGHASGDRS EIPSLSSESL GASENLSSPA BACU005769/1-831 SEDCPPPLPV KNPSRTMAQG RTGHASGDRS EVPSLSSESA GVPENLSSPA bmy_04543T0/1-631 SEDCPPPLPV KNPSRTMAQG RAGHASGDRS EVPSLSSESA GVPENLSSPA ENSTTRP00000007376/1-821 SEDCPPPLPV KNPSRTMAQG RAGHASGDRS EVPSLSSESA GVPESLSSPA 801 850 ENSP00000338769/1-903 SSS-SLMSPL EPGDPSQAPP NSEEGLREPP GTSRPSLTSG TTPSEMYLPV ENSBTAP00000016266/1-904 SSSSSLTSPV EPGGPNETLP SSEEGPCEPQ GPSRPSLTSG ISPAEMYPPV BACU005769/1-831 SSSSSLTSPV EPGGPNQTLP SSEEALWEPP GPFRPSLTSG TTPSEMYPPV bmy_04543T0/1-631 SSSSSLTSPV EPGGPNQTLP SSEEGLWEPP GPSRPSLTSG TTPSEMYPPV ENSTTRP00000007376/1-821 SSSCSLTSPV EPGGPNQTLP SSEEGLWEPP GPSRPSLTSG TTPSEMYPPV 851 900 ENSP00000338769/1-903 RFSSESTRSY RRGARSPEDG PSARQPLPRR NVPVGITEGD GSRTGSLPAS ENSBTAP00000016266/1-904 RFSSESTRSY RRG-RSLEEC RSARQPVPGR NVMVGFPEGD GSRTGVLLPS BACU005769/1-831 RFSSESTRSY RRGGRSPEDC PSARQPLPRR NTPPRM-GAA GESPGLGEAS bmy_04543T0/1-631 RFSSESTRSY RRGGRSLEDC PSARQPLPRR NMPVGFTEGD GSRTAVLPAS ENSTTRP00000007376/1-821 RFSSESTRSY RRGGRSLEDC PSARQPLPRR NMPVGFTEGD GSRTGVLPAS 901 950 ENSP00000338769/1-903 SVQLLQD ENSBTAP00000016266/1-904 SVQLLQD BACU005769/1-831 EVTRPKL bmy_04543T0/1-631 SVQLLQD ENSTTRP00000007376/1-821 SVQLLQD