KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:45 2014 Check: 00 .. Name: BACU016422/1-417 Len: 419 Check: 8541 Weight: 1.00 Name: ENSP00000266673/1-336 Len: 419 Check: 4509 Weight: 1.00 Name: ENSBTAP00000016277/1-336 Len: 419 Check: 4478 Weight: 1.00 Name: bmy_13483T0/1-358 Len: 419 Check: 2007 Weight: 1.00 Name: ENSTTRP00000006937/1-337 Len: 419 Check: 6170 Weight: 1.00 // 1 50 BACU016422/1-417 --MKLKSRNL LKKNSSCTPN GPSNLKSNIS SQQVLLEHSY AFRNPMEAKK ENSP00000266673/1-336 ---------- ---------- -MTDLNDNIC ---------- ---------K ENSBTAP00000016277/1-336 ---------- ---------- -MRDLDDSTY ---------- ---------R bmy_13483T0/1-358 MTIFLRNARY FLSQVFILLF FMTDLDHNTY ---------- ---------K ENSTTRP00000006937/1-337 ---------- ---------- -MTDLDHNTY ---------- ---------K 51 100 BACU016422/1-417 RIIKLEKEIA SLRRKMKTCL QKERRATRRW IKATCLVKNL EANNILLKGT ENSP00000266673/1-336 RYIKMITNIV IL--SLIICI -----SLAFW I--------- ---------- ENSBTAP00000016277/1-336 KYIKMITNIV IL--SLIICI -----SSAFW I--------- ---------- bmy_13483T0/1-358 KYMETITNIV TL--SLIICI -----SLAFW I--------- ---------- ENSTTRP00000006937/1-337 KYIEMITNIV IL--SLIICI -----SLAFW I--------- ---------- 101 150 BACU016422/1-417 SEHILPTALN SLPLEDFKIL EQDQQGNLQP ISPWRWLFSV VVPVLIVSNG ENSP00000266673/1-336 ---------- ------ISMT ASTYYGNLRP ISPWRWLFSV VVPVLIVSNG ENSBTAP00000016277/1-336 ---------- ------MSMT ASTYYGNFQP VSPWRWLFSV VVTVLIVSNG bmy_13483T0/1-358 ---------- ------MSMT ASTYYGNLQP ISPWRWLFSV VVPVLIVSNG ENSTTRP00000006937/1-337 ---------- ------MSMT ASTYYGNLQP ISPWRWLFSV FVPVLIVSNG 151 200 BACU016422/1-417 FKKKSLNHTG ALGGLVVGFI LTIANFSFFT SLLMFFLSSS RLTKWKGETK ENSP00000266673/1-336 LKKKSLDHSG ALGGLVVGFI LTIANFSFFT SLLMFFLSSS KLTKWKGEVK ENSBTAP00000016277/1-336 FKKKSLDHSG ALGGLVVGFI LTIANFSFFT SLVTFFLSSS KLTKWKGEAK bmy_13483T0/1-358 FKKKSLNHTG ALGGLVVGFI LTIANFSFFT SLLMFFLSSS RLTKWKGETK ENSTTRP00000006937/1-337 FKKKSLNHSG ALGGLVVGFI LTVANFSFFT SLLMFFLSSS RLTKWRGETK 201 250 BACU016422/1-417 KRLDSEYKEG GQRNWIQVFC NGAVPTELAL LYMIENGPGE IPIDFSKQHT ENSP00000266673/1-336 KRLDSEYKEG GQRNWVQVFC NGAVPTELAL LYMIENGPGE IPVDFSKQYS ENSBTAP00000016277/1-336 KHLDSEYKEG GQRNWIQVFC NGAVPTELAL LYMIESGPGE IPIDFSRQHT bmy_13483T0/1-358 KRLDSEYKEG GQRNWIQVFC NGAVPTELAL LYMIENGPGE IPIDFSKQHT ENSTTRP00000006937/1-337 KRLDSEYKEG GQRNWIQVFC NGAVPTELAL LYMIENGPGE IPIDFSKQHT 251 300 BACU016422/1-417 ASWMCLSLLA ALASSAGDTW ASEIGTVLSK SPPRLITTWE KVPVGTNGGV ENSP00000266673/1-336 ASWMCLSLLA ALACSAGDTW ASEVGPVLSK SSPRLITTWE KVPVGTNGGV ENSBTAP00000016277/1-336 ASWMCLSLLA ALASSAGDTW ASEVGPVLSK STPRLITTWE KVPVGTNGGV bmy_13483T0/1-358 ASWMCLSLLA ALASSAGDTW ASEVGTVLSK SPPRLITTWE KVPVGTNGGV ENSTTRP00000006937/1-337 ASWMCLSLLA ALACSAGDTW ASEVGTVLSK SPPRLITTWE KVPVGTNGGV 301 350 BACU016422/1-417 TMVGLASSLL GGTFVGIAYF LTQLVFVNDL DISAPQWPII AFGGLAGLLG ENSP00000266673/1-336 TVVGLVSSLL GGTFVGIAYF LTQLIFVNDL DISAPQWPII AFGGLAGLLG ENSBTAP00000016277/1-336 TVVGLASSLL GGTFVGITYF LTQLVFVNDL DISAPQWPII AFGGLAGLLG bmy_13483T0/1-358 TMVGIASSLL GGTFVGIAYF LTQLVFVNDL DISAPQWPII AFGGLAGLLG ENSTTRP00000006937/1-337 TMVGLASSLL GGTFVGIAYF LTQLVFVNDL DISAPQWPII AFGGLAGLLG 351 400 BACU016422/1-417 SIVDSYLGAT MQFSGLDEST GMVVSSPANE VKYIAGKPIL DNNAVNLFSS ENSP00000266673/1-336 SIVDSYLGAT MQYTGLDEST GMVVNSPTNK ARHIAGKPIL DNNAVNLFSS ENSBTAP00000016277/1-336 SIVDSYLGAT MQFSGLDEST GMVVNSPGKE VKYIAGKPIL DNNAVNLFTS bmy_13483T0/1-358 SIVDSYLGAT MQFSGLDEST GMVVSSPANE VKYIAGKPIL DNNAVNLFSS ENSTTRP00000006937/1-337 SIVDSYLGAT MQFSGLDEST GMVVSSPANE VKYIAGKPIL DNNAVNLFSS 401 450 BACU016422/1-417 VLVALLLPTA AAWGFWPRQ ENSP00000266673/1-336 VLIALLLPT- AAWGFWPRG ENSBTAP00000016277/1-336 VLVALLLPT- AAWGFWPRQ bmy_13483T0/1-358 VLVALLLPTA AAWGFWPRL ENSTTRP00000006937/1-337 VLVALLLPTA AAWGFWPRQ