KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:46 2014 Check: 00 .. Name: ENSBTAP00000016280/1-333 Len: 345 Check: 2284 Weight: 1.00 Name: bmy_19211T0/1-316 Len: 345 Check: 4696 Weight: 1.00 Name: ENSTTRP00000008917/1-332 Len: 345 Check: 7615 Weight: 1.00 Name: BACU008832/1-282 Len: 345 Check: 2490 Weight: 1.00 // 1 50 ENSBTAP00000016280/1-333 MAAAAAAAAA AAATRETWRA ASPRRRRSAA RRPKRREA-- -----AAAAG bmy_19211T0/1-316 -------MAA AAAALEAWQA ASRRRRRSAA MRPRRREAAA -----AAAAR ENSTTRP00000008917/1-332 --------MA AAAALEAWQA VSRWRRRSAA LRPRRREAAA AAVAVAAAAR BACU008832/1-282 --------MT TPFFLN---- ---------- ---------- ---------- 51 100 ENSBTAP00000016280/1-333 TPGAEPEVDG GVVLRRIQEA REDLVISDFW SSAL-ETITG CLRKHLEQLR bmy_19211T0/1-316 APGAQPE--- ---------- -GQSVPSDCT GPALSETVNR CLRKHLEQLK ENSTTRP00000008917/1-332 DPGAQPEVDG GDVLRRIQEA REDLLISDFW SSAL-ETINR CLRKYLEQLK BACU008832/1-282 ---------- ---------- REDLLISDFW SSAL-ETVNR CLRKHLEQLK 101 150 ENSBTAP00000016280/1-333 APEGSLSEAL GHLHLDAPPV EADATPGSVP EETLVPGTCC FKCVCYGVGK bmy_19211T0/1-316 APVGPLSEAI GSLHLGSSPG ESDVAPGSVP EETPVTGSCR LKCVCYGVGN ENSTTRP00000008917/1-332 APVGPLSEAL GNLHLDSSPG ESDVAPGSVP EETPVTGSCR LKCVCYGVGN BACU008832/1-282 APVGPLSEAI GSLHLDSSPG ESDVAPGSVP EETPVTGSCC LKCVCYGVGN 151 200 ENSBTAP00000016280/1-333 FASCIIARSQ LAFLLLLLER CQIPRSHCCV YDPLFSRLEI AVLNALGVVV bmy_19211T0/1-316 FATCVIARNQ LAFLLLFLEK CQIPRSHCWV YDPLFSQLEI AVLSTLGVVV ENSTTRP00000008917/1-332 FATCIIARNQ LAFLLLFLEK CQIPRSHCWV YDPLFSQLEI AVLGTLGVVV BACU008832/1-282 FATCVIARNQ LAFLLLFLEK CQIPRSHCWV YDPLFSQLEI AVLSTLGVVV 201 250 ENSBTAP00000016280/1-333 LGDNEEGKRS VCGEPTIFYM PHCGTALYNN LLWRNWSVDA LSKVVIIGNS bmy_19211T0/1-316 LSENEEGKRS VYGEPTVFYM LHCGTALYNN LLWRNWSIDA LSKMVIVGNS ENSTTRP00000008917/1-332 LSENEEGKRS VYGEPTVFYM LHCGTALYNN LLWRNWSIDA LSKMVIVGNS BACU008832/1-282 LSENEEGKRS VYGEPTVFYM LHCGTALYNN LLWRNWSIDA LSKMVIVGNS 251 300 ENSBTAP00000016280/1-333 FGGLEERLLT RILHKHYPYV AKILTGLEEL AFPQTPRYMD VFNDTSLHWF bmy_19211T0/1-316 FRGLEERLLT RILQKHYPYV AKIVKGVEEL AFPQTSQYTD VFNDTSVHWF ENSTTRP00000008917/1-332 FTGLEERLLT RILQKHYPYV AKILKGREEL AFPQTSQYTD VFNDTSVHWF BACU008832/1-282 FRGLEEKLLT RILQKHYPYV AKIAKGVEEL AFPQTSQYTD VFNDTSVHWF 301 350 ENSBTAP00000016280/1-333 PVQKLTQLPT DTWAFREEPD YQDCEDLEII RKKTEPPCAD L---- bmy_19211T0/1-316 PVQKLTQLST DTWAFREEPD YQDCEDLEII RNKTEDPSAR LT--- ENSTTRP00000008917/1-332 PVQKLTQLST DTWAFREEPD YQDCEGLEII RNKTEDPSAT D---- BACU008832/1-282 PVQKLTQLST DTWAFREEPD YQDCEDLEII RNKTEDPSAP DLNPL