KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:47 2014 Check: 00 .. Name: ENSP00000265593/1-898 Len: 904 Check: 37 Weight: 1.00 Name: ENSTTRP00000010669/1-901 Len: 904 Check: 6391 Weight: 1.00 Name: ENSBTAP00000016291/1-903 Len: 904 Check: 8956 Weight: 1.00 Name: bmy_10417T0/1-887 Len: 904 Check: 5887 Weight: 1.00 Name: BACU016566/1-891 Len: 904 Check: 3900 Weight: 1.00 // 1 50 ENSP00000265593/1-898 ----MAAAAA EEGMEPRALQ YEQTLMYGRY TQDLGAFAKE EAARIRLGGP ENSTTRP00000010669/1-901 MAAAAGAAAA EEGMEPRALQ YEQTLMYGRY TQDLGAFAKE EAARIRLGGP ENSBTAP00000016291/1-903 -MAAAAGPAA EEGMEPRALQ YEQTLMYGRY TQDLGAFAKE EAARIRLGGP bmy_10417T0/1-887 MAAAAGAAAA EEGMEPRALQ YEQTLMYGRY TQDLGAFAKE EAARIRLGGP BACU016566/1-891 ---------- ---MEPRALQ YEQTLMYGRY TQDLGAFAKE EAARIRLGGP 51 100 ENSP00000265593/1-898 EPWKGPPSSR AAPELLEYGR SRCARCRVCS VRCHKFLVSR VGEDWIFLVL ENSTTRP00000010669/1-901 EPWRGPPSPR AAPELLEYGQ SRCTRCRICT VHCHKFLVSR VGEDWIFLVL ENSBTAP00000016291/1-903 EPWRGPPSPR APPELLEYGQ SRCARCRICT VHGHKFIVSR VGEDWIFLVV bmy_10417T0/1-887 EPWRGPPSPR AAPELLEYGQ SRCTRCRICT VHCHKFLVSR VGEDWIFLVL BACU016566/1-891 EPWRGPPSPR AAPELLEYGQ SRCTRCRICT VHCHKFLVSR VGEDWIFLVL 101 150 ENSP00000265593/1-898 LGLLMALVSW VMDYAIAACL QAQQWMSRGL NTSILLQYLA WVTYPVVLIT ENSTTRP00000010669/1-901 LGLLMALVSW AMDYAIAACL QAQQWMSRGL NTNLLLQYLA WVTYPVVLIT ENSBTAP00000016291/1-903 LGVLMALVSW AMDYAIAACL QAQQWMSRGL NTNLLLQYLA WVTYPVVLIT bmy_10417T0/1-887 LGLLMALVSW AMDYAIAACL QAQQWMSRGL NTNLLLQYLA WVTYPVVLIT BACU016566/1-891 LGLLMALVSW AMDYAIAACL QAQQWMSRGL NTNLLLQYLA WVTYPVVLIT 151 200 ENSP00000265593/1-898 FSAGFTQILA PQAVGSGIPE MKTILRGVVL KEYLTLKTFI AKVIGLTCAL ENSTTRP00000010669/1-901 FSAGFTQILA PQAVGSGIPE MKTILRGVVL KEYLTLKTFV AKVIGLTCAL ENSBTAP00000016291/1-903 FSAGFTQILA PQAVGSGIPE MKTILRGVVL KEYLTLKTFV AKVIGLTCAL bmy_10417T0/1-887 FSAGFTQILA PQAVGSGIPE MKTILRGVVL KEYLTLKTFV AKVIGLTCAL BACU016566/1-891 FSAGFTQILA PQAVGSGIPE MKTILRGVVL KEYLTLKTFV AKVIGLTCAL 201 250 ENSP00000265593/1-898 GSGMPLGKEG PFVHIASMCA ALLSKFLSLF GGIYENESRN TEMLAAACAV ENSTTRP00000010669/1-901 GSGMPLGKEG PFVHIASMCA ALLSKFLSLF GGIYENESRN TEMLAAACAV ENSBTAP00000016291/1-903 GSGMPLGKEG PFVHIASMCA ALLSKFLSLF GGIYENESRN TEMLAAACAV bmy_10417T0/1-887 GSGMPLGKEG PFVHIASMCA ALLSKFLSLF GGIYENESRN TEMLAAACAV BACU016566/1-891 GSGMPLGKEG PFVHIASMCA ALLSKFLSLF GGIYENESRN TEMLAAACAV 251 300 ENSP00000265593/1-898 GVGCCFAAPI GGVLFSIEVT STFFAVRNYW RGFFAATFSA FIFRVLAVWN ENSTTRP00000010669/1-901 GVGCCFAAPI GGVLFSIEVT STFFAVRNYW RGFFAATFSA FIFRVLAVWN ENSBTAP00000016291/1-903 GVGCCFAAPI GGVLFSIEVT STFFAVRNYW RGFFAATFSA FIFRVLAVWN bmy_10417T0/1-887 GVGCCFAAPI GGVLFSIEVT STFFAVRNYW RGFFAATFSA FIFRVLAVWN BACU016566/1-891 GVGCCFAAPI GGVLFSIEVT STFFAVRNYW RGFFAATFSA FIFRVLAVWN 301 350 ENSP00000265593/1-898 RDEETITALF KTRFRLDFPF DLQELPAFAV IGIASGFGGA LFVYLNRKIV ENSTTRP00000010669/1-901 RDEETITALF KTRFRLDFPF DLQELPAFAV IGIAXXXXXX XXXXXXXXXX ENSBTAP00000016291/1-903 RDEETITALF KTRFRLDFPF DLQELPAFAV IGIASGFGGA LFVYLNRKIV bmy_10417T0/1-887 RDEETITALF KTRFRLDFPF DLQELPAFAV IGIASGFGGA LFVYLNRKIV BACU016566/1-891 RDEETITALF KTRFRLDFPF DLQELPAFAV IGIASGFGGA LFVYLNRKIV 351 400 ENSP00000265593/1-898 QVMRKQKTIN RFLMRKRLLF PALVTLLIST LTFPPGFGQF MAGQLSQKET ENSTTRP00000010669/1-901 XXXXXXXXXX XXXXXXRLLF PALVTLLIST LTFPPGFGQF MAGQLSQKET ENSBTAP00000016291/1-903 QVMRKQKTIN RFLMKKRLLF PALVTLLIST LTFPAGFGQF MAGQLSQKET bmy_10417T0/1-887 QVMRKQKTIN RFLMKKRLLF PALVTLLIST LTFPPGFGQF MAGQLSQKET BACU016566/1-891 QVMRKQKTIN RFLMKKRLLF PALVTLLIST LTFPPGFGQF MAGQLSQKET 401 450 ENSP00000265593/1-898 LVTLFDNRTW VRQGLVEELE PPSTSQAWNP PRANVFLTLV IFILMKFWMS ENSTTRP00000010669/1-901 LVTLFDNRTW VRQGLMEELE PPGTSQAWNP PRANVFLTLV IFILMKFWMS ENSBTAP00000016291/1-903 LVTLFDNRTW VRQGLMEELE PPGTSQAWNP PRANVFLTLV IFILMKFWMS bmy_10417T0/1-887 LVTLFDNRTW VRQGLMEELE PPGTSQAWNP PRANC----- ---------P BACU016566/1-891 LVTLFDNRTW VRQGLMEELE PPGTSQAWNP PRANVFLTLV IFILMKFWMS 451 500 ENSP00000265593/1-898 ALATTIPVPC GAFMPVFVIG AAFGRLVGES MAAWFPDGIH TDSSTYRIVP ENSTTRP00000010669/1-901 ALATTIPVPC GAFMPVFVIG AAFGRLVGES MAAWFPDGIH TDGSTYRIVP ENSBTAP00000016291/1-903 ALATTIPVPC GAFMPVFVIG AAFGRLVGES MAAWFPDGIH TDGSTYRIVP bmy_10417T0/1-887 CPPPPLPVSI PTPLPE---G AAFGRLVGES MAAWFPDGIH TDGSTYRIVP BACU016566/1-891 ALATTIPVPC GAFMPVFVIG AAFGRLVGES MAAWFPDGIH TDGSTYRIVP 501 550 ENSP00000265593/1-898 GGYAVVGAAA LAGAVTHTVS TAVIVFELTG QIAHILPVMI AVILANAVAQ ENSTTRP00000010669/1-901 GGYAVVGAAA LAGAVTHTVS TAVIVFELTG QIAHILPVMI AVILANAVAQ ENSBTAP00000016291/1-903 GGYAVVGAAA LAGAVTHTVS TAVIVFELTG QIAHILPVMI AVILANAVAQ bmy_10417T0/1-887 GGYAVVGAAA LAGAVTHTVS TAVIVFELTG QIAHILPVMI AVILANAVAQ BACU016566/1-891 GGYAVVGAAA LAGAVTHTVS TAVIVFELTG QIAHILPVMI AVILANAVAQ 551 600 ENSP00000265593/1-898 SLQPSLYDSI IRIKKLPYLP ELGWGRHQQY RVRVEDIMVR DVPHVALSCT ENSTTRP00000010669/1-901 SLQPSLYDSI IRIKKLPYLP ELGWGRHQQY RVRVEDIMVR DVPHVALSCT ENSBTAP00000016291/1-903 SLQPSLYDSI IRIKKLPYLP ELGWGRHQQY RVRVEDIMVR DVPHVALSCT bmy_10417T0/1-887 SLQPSLYDSI IRIKKLPYLP ELGWGRHQQY RVRVEDIMVR DVPHVALSCT BACU016566/1-891 SLQPSLYDSI IRIKKLPYLP ELGWGRHQQY RVRVEDIMVR DVPHVALSCT 601 650 ENSP00000265593/1-898 FRDLRLALHR TKGRMLALVE SPESMILLGS IERSQVVALL GAQLSPARRR ENSTTRP00000010669/1-901 FRDLRLALHR TKGRVLALVE SPESMILLGS IECSQVVALL GAQLSPARRR ENSBTAP00000016291/1-903 FRDLRLALHR TKGRMLALVE SPESMILLGS IERSQVVALL GAQLSPARRR bmy_10417T0/1-887 FRDLRLALHR TKGRVLALVE SPESMILLGS IECSQVVALL GAQLSPARRR BACU016566/1-891 FRDLRLALHR TKGRVLALVE SPESMILLGS IECSQVVALL GAQLSPARRR 651 700 ENSP00000265593/1-898 QHMQERRATQ TSPLSDQEGP PTPEASVCFQ VNTEDSAFPA ARGETHKPLK ENSTTRP00000010669/1-901 QYMQEHRAAR TSSPSDQESP PSPETSLLFQ VNTEDSGFPA ARGETHKPLK ENSBTAP00000016291/1-903 RYMQERQAAQ TSSPSDQESP PSPETSVRFQ VNTEDQGFPA GRGETHKPLK bmy_10417T0/1-887 QYMQEHRAAR TSSPSDQESP PSPETSLLFQ VNTEDSGFPA ARGETHKPLK BACU016566/1-891 QYMQEHRAAR TSSPSDQESP PSPETSLLFQ VNTEDSGFPA ARGETHKPLK 701 750 ENSP00000265593/1-898 PALKRGPSVT RNLGESPTGS AESAGIALRS LFCGSPPPEA AS--EKLESC ENSTTRP00000010669/1-901 PALKRGPSNT MNLKESPTGN MEQAGIALRS LFCGSPPPEP AS--EKSEKC ENSBTAP00000016291/1-903 PALKRSPSNT VNVKESPTGN MEQAGITLRS LFCGSPPAEP ASELEKSGKC bmy_10417T0/1-887 PALKRGPSNT MNLKESPTGN MEQAGIALRS LFCGSPPPEP ASELEKSETC BACU016566/1-891 PALKRGPSNT MNLKESPTGN MEQAGIALRS LFCGSPPPEP ASELEKSETC 751 800 ENSP00000265593/1-898 EKRKLKRVRI SLASDADLEG EMSPEEILEW EEQQLDEPVN FSDCKIDPAP ENSTTRP00000010669/1-901 DKRKPKRVRI SLASDSDLEG EM-PEEILEW EEQQLDEPVN FSDCKIDPAP ENSBTAP00000016291/1-903 DKRKLKRVRI SLASDSDLEG EMTPEEILEW EEQQLDEPVN FSDCKIDPAP bmy_10417T0/1-887 DKRKPKRVRI SLASDSDLEG EMTPEEILEW EEQQLDEPVN FSDCKIDPAP BACU016566/1-891 DKRKPKRVRI SLASDSDLEG EMTPEEILEW EEQQLDEPVN FSDCKIDPAP 801 850 ENSP00000265593/1-898 FQLVERTSLH KTHTIFSLLG VDHAYVTSIG RLIGIVTLKE LRKAIEGSVT ENSTTRP00000010669/1-901 FQLVERTSLH KTHTIFSLLG VDHAYVTSIG RLIGIVTLKE LRKAIEGSVT ENSBTAP00000016291/1-903 FQLVERTSLH KTHTIFSLLG VDHAYVTSIG RLIGIVTLKE LRKAIEGSVT bmy_10417T0/1-887 FQLVERTSLH KTHTIFSLLG VDHAYVTSIG RLIGIVTLKE LRKAIEGSVT BACU016566/1-891 FQLVERTSLH KTHTIFSLLG VDHAYVTSIG RLIGIVTLKE LRKAIEGSVT 851 900 ENSP00000265593/1-898 AQGVKVRPPL ASFRDSATSS SDTETTEVHA LWGPHSRHGL PREGSPSDSD ENSTTRP00000010669/1-901 AQGVKVRPPL ASFRDSATSS SDTETTEVHA LWGPRSRHGL PREGSPSDSD ENSBTAP00000016291/1-903 AQGVKVRPPL ASFRDSATSS SDTETTEVHA LWGPRSRHGL PREGSPSDSD bmy_10417T0/1-887 AQGVKVRPPL ASFRDSATSS SDTETTEVHA LWGPRSRHGL PREGSPSDSD BACU016566/1-891 AQGVKVRPPL ASFRDSATSS SDTETTEVHA LWGPRSRHGL PREGSPSDSD 901 950 ENSP00000265593/1-898 DKCQ ENSTTRP00000010669/1-901 DKCQ ENSBTAP00000016291/1-903 DKCQ bmy_10417T0/1-887 DKCQ BACU016566/1-891 DKCQ