KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:48 2014 Check: 00 .. Name: ENSP00000345751/1-640 Len: 683 Check: 8152 Weight: 1.00 Name: ENSTTRP00000004897/1-683 Len: 683 Check: 3361 Weight: 1.00 Name: ENSBTAP00000016301/1-641 Len: 683 Check: 292 Weight: 1.00 Name: bmy_18717T0/1-609 Len: 683 Check: 5800 Weight: 1.00 Name: BACU018202/1-641 Len: 683 Check: 9477 Weight: 1.00 // 1 50 ENSP00000345751/1-640 ---------- ---------- ---------- ---------- --MHVKKYLL ENSTTRP00000004897/1-683 KLLHINVAYL FLLPCFPPRI PTDGQLSCKN GIGKPGHREG ATMHIKKYLL ENSBTAP00000016301/1-641 ---------- ---------- ---------- ---------- --MHVKKYLL bmy_18717T0/1-609 ---------- ---------- ---------- ---------- --MHIKKYLL BACU018202/1-641 ---------- ---------- ---------- ---------- --MHVKKYLL 51 100 ENSP00000345751/1-640 KGLHRLQKGP GYTYKELLVW YCDNTNTHGP KRIICEGPKK KAMWFLLTLL ENSTTRP00000004897/1-683 KCLHRLQKGP GYTYKELLVW YCDNTNTHGP KRIICEGPKK KAMWFVLTLL ENSBTAP00000016301/1-641 KGLHRLQKGP GYTYKELLVW YCDNTNTHGP KRIICEGPKK KAMWFVLTLL bmy_18717T0/1-609 KCLHRLQKGP GYTYKELLVW YCDNTNTHGP KRIICEGPKK KAMWFVLTLL BACU018202/1-641 KCLHRLQKGP GYTYKELLVW YCDNTNTHGP KRIICEGPKK KAMWFVLTLL 101 150 ENSP00000345751/1-640 FAALVCWQWG IFIRTYLSWE VSVSLSVGFK TMDFPAVTIC NASPFKYSKI ENSTTRP00000004897/1-683 FTSLVCWQWG VFIRTYLNWE VSVSLSIGFK AMDFPAVTVC NTSPFQYSKV ENSBTAP00000016301/1-641 FTSLVCWQWG LFIKTYLNWE VSVSLSIGFK TMDFPAVTIC NASPFQYSKV bmy_18717T0/1-609 FTSLVCWQWG VFIRTYLSWE VSVSLSIGFK AMDFPAVTIC NTSPFQYSKV BACU018202/1-641 FTSLVCWQWG VFIRTYLSWE VSVSLSIGFK AMDFPAVTIC NTSPFQYSKI 151 200 ENSP00000345751/1-640 KHLLKDLDEL MEAVLERILA PELSHANATR NLNFSIWNHT PLVLIDERNP ENSTTRP00000004897/1-683 KHLLKDLDEL MEAVLARILG PELSHVNTTR ALNLTIWNHV PLVFIDEQNP ENSBTAP00000016301/1-641 QHLLKDLDEL MEAVLGRILG PELSQVNDTR ALNLSIWHHT PLVFINEQNP bmy_18717T0/1-609 KHLLKDLDEL MEAVLERILG PELSHVNTTR ALNLTIWNYM PLVFINEQNP BACU018202/1-641 KHLLKDLDEL MEAVLERILG PELSHVNATR ALNLTIWNYM PLVFINEQNP 201 250 ENSP00000345751/1-640 HHPMVLDLFG DNHNGLTSSS -ASEKICNAH GCKMAMRLCS LNRTQCTFRN ENSTTRP00000004897/1-683 HHPVVLDLFE DNYNGSAGST PAPGRTCSAH GCKVAMKLCS HNGTTCNFRN ENSBTAP00000016301/1-641 HHPVVLDLFE DNFNGSASNS PAPGRPCSAH RCKVAMRLCS HNGTTCTFRN bmy_18717T0/1-609 HHPVVLDLFE DNYNGSASST PAPERTCSAQ GCKVAMRLCS HNGTTCNFRN BACU018202/1-641 HHPVVLDLFE DNYNGSASSS PAPGRTCSAQ GCKVAMRLCS HNGTTCNFRN 251 300 ENSP00000345751/1-640 FTSATQALTE WYILQATNIF AQVPQQELVE MSYPGEQMIL ACLFGAEPCN ENSTTRP00000004897/1-683 FSSATQAVTE WYALQATNIF AQVPNQELVA MGYSAEQLIL ACLFGAEACT ENSBTAP00000016301/1-641 FSSATQAVTE WYTLQATNIF AQVPNQELVA MGYPAERLIL ACLFGAEPCN bmy_18717T0/1-609 FSSATQAVTE WYTLQATNIF AQVPKQELVA MGYPAERLIL ACLFGAEPCN BACU018202/1-641 FSSATQAVTE WYTLQATNIF AQVPKQELVA MGYPAERLIL ACLFGAEPCN 301 350 ENSP00000345751/1-640 YRNFTSIFYP HYGNCYIFNW GMTEKALPSA NPGTEFGLKL ILDIGQEDYV ENSTTRP00000004897/1-683 YRNFTRIFHP DYGNCYIFNW GMKEKALPSA NPGAEFGLKL ILDVGQEDYV ENSBTAP00000016301/1-641 YRNFTPIFHP DYGNCYIFNW GMTEKALPSA NPGTEFGLKL ILDMGQEDYV bmy_18717T0/1-609 YRNFTPIFHP DYGNCYIFNW GMREKALPSA NPGAEFGLKL ILDMGQEDYV BACU018202/1-641 YRNFTPIFHP DYGNCYIFNW GMREKALPSA NPGAEFGLKL ILDMGQEDYV 351 400 ENSP00000345751/1-640 PFLASTAGVR LMLHEQRSYP FIRDEGIYAM SGTETSIGVL VDKLQRMGEP ENSTTRP00000004897/1-683 PFLTSTAGAR LMLHEQMSYP FIKEEGIFAM SGMETSIGVL VDKLERKGEP ENSBTAP00000016301/1-641 PFLTSTAGAR LMLHEQRSYP FIKEEGIYAM AGMETSIGVL VDKLQRKGEP bmy_18717T0/1-609 PFLTSTAGAR LMLHEQMSYP FIKEEGIFAM SGMETSIGVL VDRLERKGEP BACU018202/1-641 PFLTSTAGAR LMLHEQMSYP FIKEEGIFAM SGMETSIGVL VDRLERKGEP 401 450 ENSP00000345751/1-640 YSPCTVNGSE VPVQNFYSDY NTTYSIQACL RSCFQDHMIR NCNCGHYLYP ENSTTRP00000004897/1-683 YSQCTVNGSD VPIRNLYSDY NTTYSIQXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000016301/1-641 YSQCTKNGSD VPIQNLYSNY NTTYSIQACI RSCFQEHMIR ECGCGHYLYP bmy_18717T0/1-609 YSQCTMNGSD VPIRNLYSDY NTTYSIQACI RSCFQDHMIH NCSCGHYLYP BACU018202/1-641 YSQCTMNGSD VPIRNLYSDY NTTYSIQACI RSCFQDHMIR NCSCGHYLYP 451 500 ENSP00000345751/1-640 LPRGEKYCNN RDFPDWAHCY SDLQMSVAQR ETCIGMCKES CNDTQYKMTI ENSTTRP00000004897/1-683 XXXXXXXXXX XXXXXXXYCY SALRTSLAQR ETCIDVCKES CNDTQYKMTI ENSBTAP00000016301/1-641 LPHKRKYCNN QEFPDWAHCY SALRISLAQR ETCIYACKES CNDTQYKMTI bmy_18717T0/1-609 LPRGEKYCNN QEFPDWAYCY SALRMSLAQR ETCIDVCKES CNDTQYKMTI BACU018202/1-641 LPRGEKYCNN QEFPDWAYCY SALRMSLAQR ETCIDVCKES CNDTQYKMTI 501 550 ENSP00000345751/1-640 SMADWPSEAS EDWIFHVLSQ ERDQSTNITL SRKGIVKLNI YFQEFNYRTI ENSTTRP00000004897/1-683 SMAVWPSESS EDWIFHVLSE ERDQSPNITM NRKGVIKLNI YFQEYNYRTI ENSBTAP00000016301/1-641 SMAVWPSEAS EDWIFHVLSQ ERDQSSNITL SRKGIVKLNI YFQEFNYRTI bmy_18717T0/1-609 SMAVWPSEAS EDWIFHVLSQ ERDQSTNITL NRKGIIKLNI YFQEYNYRTI BACU018202/1-641 SMAVWPSEAS EDWIFHVLSQ ERDQSTNITL NRKGIIKLNI YFQEYNYRTI 551 600 ENSP00000345751/1-640 EESAANNIVW LLSNLGGQFG FWMGGSVLCL IEFGEIIIDF VWITIIKLVA ENSTTRP00000004897/1-683 EESAANNIVW LLSNLGGQFG FWMGGSVLCL IEFAEIIIDF VWITIIKLAA ENSBTAP00000016301/1-641 EESAANNIVW LLSNLGGQFG FWMGGSVLCL IEFGEIIIDF VWITIIKLVA bmy_18717T0/1-609 EESAANNIVW LLSNLGGQFG FWMGGSVLCL IEFGEIIIDF VWITIIRLVA BACU018202/1-641 EESAANNIVW LLSNLGGQFG FWMGGSVLCL IEFGEIIIDF VWITIIRLVA 601 650 ENSP00000345751/1-640 LAKSLRQRRA QASYAGPPPT VAELVEAHTN FGFQPDTAPR SPNTGPYPSE ENSTTRP00000004897/1-683 LAKSLRRRRT QARYDGPPPT VAELVEAHTN FGFQPDTATH GPDAGPHPHE ENSBTAP00000016301/1-641 LAKSVRQKRA QARYEGPPPT VAELVEAHTN FGFQPDLATP GPDVEAYPHE bmy_18717T0/1-609 LAKSLRRRRA QACYDGPPPT VAELVEAH-- ---------- ---------- BACU018202/1-641 LAKSLRQRRA QACYDGPPPT VAELVEAHTN FGFQPDTATH GPDAGPHPHE 651 700 ENSP00000345751/1-640 QALPIPGTPP PNYDSLRLQP LDVIESDSEG DAI ENSTTRP00000004897/1-683 QTPPIPGTPP PNYDSLRLQP LDVIESDNEG DAI ENSBTAP00000016301/1-641 QNPPIPGTPP PNYDSLRLQP LDVIESDSEG DAI bmy_18717T0/1-609 ---------- PNYDSLRLQP LDVIESDNEG DAI BACU018202/1-641 QTPPIPGTPP PNYDSLRLQP LDVIESDNEG DAI