KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:53 2014 Check: 00 .. Name: ENSBTAP00000016326/1-1177 Len: 1335 Check: 3982 Weight: 1.00 Name: ENSP00000262013/1-1321 Len: 1335 Check: 1295 Weight: 1.00 Name: ENSTTRP00000002567/1-1316 Len: 1335 Check: 2503 Weight: 1.00 Name: bmy_06702T0/1-940 Len: 1335 Check: 3498 Weight: 1.00 Name: BACU006444/1-1334 Len: 1335 Check: 6607 Weight: 1.00 // 1 50 ENSBTAP00000016326/1-1177 ---------- ----MSPGCM LLFVFGFVGG A--------- ---------- ENSP00000262013/1-1321 MELEDGVVYQ EEPGGSGAVM SERVSGLAGS IYREFERLIG RYDEEVVKEL ENSTTRP00000002567/1-1316 MELEDGVVYQ EEPGGSGAVM SERVSGLAGS IYREFERLIG RYDEEVVKEL bmy_06702T0/1-940 ---------- ---------- ---------- ---------- ---------- BACU006444/1-1334 MELEDGVVYQ EEPGGSGAVM SERVSGLAGS IYREFERLIG RYDEEVVKEL 51 100 ENSBTAP00000016326/1-1177 VVINSAILVS LSVLL----- ---------- ---------- ---------- ENSP00000262013/1-1321 MPLVVAVLEN LDSVFAQDQE HQVELELLRD DNEQLITQYE REKALRKHAE ENSTTRP00000002567/1-1316 MPLVVAVLEN LDSVFAQDQE HQVELELLRD DNEQLITQYE REKALRKHAE bmy_06702T0/1-940 ---------- ---------- ---------- ---------- ---------- BACU006444/1-1334 MPLVVAVLEN LDSVFAQDQE HQVELELLRD DNEQLITQYE REKALRKHAE 101 150 ENSBTAP00000016326/1-1177 ---------- ---------- ---------- ---------- ---------- ENSP00000262013/1-1321 EKFIEFEDSQ EQEKKDLQTR VESLESQTRQ LELKAKNYAD QISRLEEREA ENSTTRP00000002567/1-1316 EKFIEFEDSQ EQEKKDLQTR VESLESQTRQ LELKAKNYAD QISRLEEREA bmy_06702T0/1-940 ---------- ---------- ---------- ---------- ---------- BACU006444/1-1334 EKFIEFEDSQ EQEKKDLQTR VESLESQTRQ LELKAKNYAD QISRLEEREA 151 200 ENSBTAP00000016326/1-1177 ---------- -----LVHFS IS-------- --TGVPALTQ NLPRILRKER ENSP00000262013/1-1321 ELKKEYNALH QRHTEMIHNY MEHLERTKLH QLSGSDQLES TAHSRIRKER ENSTTRP00000002567/1-1316 ELKKEYNALH QRHTEMIHNY MEHLERTKLH QLSGGDQLES TAHSRIRKER bmy_06702T0/1-940 ---------- -----MIHNY MEHLERTKLH QLSGGDQLES TAHSRIRKER BACU006444/1-1334 ELKKEYNALH QRHTEMIHNY MEHLERTKLH QLSGGDQLES TAHSRIRKER 201 250 ENSBTAP00000016326/1-1177 PISLGIFPLP SGDGLLTPDT QKGGETPGSE QWKFQELSQP RSHTSLK--- ENSP00000262013/1-1321 PISLGIFPLP AGDGLLTPDA QKGGETPGSE QWKFQELSQP RSHTSLKVSN ENSTTRP00000002567/1-1316 PISLGIFPLP AGDGLLTPDT QKGGETPGSE QWKFQELSQP RSHTSLKVSS bmy_06702T0/1-940 PISLGIFPLP AGEGLLTPDT QKGGETPGSE QWKFQELSQP RSHTSLKVSS BACU006444/1-1334 PISLGIFPLP AGDGLLTPDT QKGGETPGSE QWKFQELSQP RSHTSLKVSS 251 300 ENSBTAP00000016326/1-1177 ---------- -DELSDVSQG GSKATTPAST AASDVAATPS DTPLHEENGG ENSP00000262013/1-1321 SPEPQKAVEQ EDELSDVSQG GSKATTPAST ANSDVATIPT DTPLKEENEG ENSTTRP00000002567/1-1316 SPEPLKAIEQ EDELSDVSQG GSKATTPAST TASDVAAIPS DTPLHEENEG bmy_06702T0/1-940 SPEPLKAIEQ EDELSDVSQG GSKATTPAST AASDVAAIPS DTPLHEENEG BACU006444/1-1334 SPEPLKAIEQ EDELSDVSQG GSKATTPAST TASDVAAIPS DTPLHEENEA 301 350 ENSBTAP00000016326/1-1177 VVEVADTPDK SEISKHIEVH VVQETRNIAT GSAENEEKSE VQAIIESTPE ENSP00000262013/1-1321 FVKVTDAPNK SEISKHIEVQ VAQETRNVST GSAENEEKSE VQAIIESTPE ENSTTRP00000002567/1-1316 FVKVADTPDK LERSKHIEVQ VVQETRNVST DSAENEEKSE VQAIIESTPE bmy_06702T0/1-940 FVKVADTPDK SEISKHIEVQ VVQETRNVST DSAENEEKSE VQAIIESTPE BACU006444/1-1334 FVKVADTPDK SEISKHIEVQ VVQETRNVST DSAENEEKSE VQAIIESTPE 351 400 ENSBTAP00000016326/1-1177 LDMDKDLSGY KGSSTPTKGI ENKAFDRNTE SLFEELSSAG SGLIGDVDEG ENSP00000262013/1-1321 LDMDKDLSGY KGSSTPTKGI ENKAFDRNTE SLFEELSSAG SGLIGDVDEG ENSTTRP00000002567/1-1316 LDMDKDLSGY KGSSTPTKGI ENKAFDRNTE SLFEELSSAG SGLIGDVDEG bmy_06702T0/1-940 LDMDKDLSGY KGSSTPTKGI ENKAFDRNTE SLFEELSSAG SGLIGDVDEG BACU006444/1-1334 LDMDKDLSGY KGSSTPTKGI ENKAFDRNTE SLFEELSSAG SGLIGDVDEG 401 450 ENSBTAP00000016326/1-1177 ADLLGMGREV ENLILENTQL LETKNALNVV KNDLIAKVDE LTCEKDVLQG ENSP00000262013/1-1321 ADLLGMGREV ENLILENTQL LETKNALNIV KNDLIAKVDE LTCEKDVLQG ENSTTRP00000002567/1-1316 ADLLGMGREV ENLILENTQL LETKNALNVV KNDLIAKVDE LTCEKDVLQG bmy_06702T0/1-940 ADLLGMGREV ENLILENTQL LET------- ---------- ---------- BACU006444/1-1334 ADLLGMGREV ENLILENTQL LETKNALNVV KNDLIAKVDE LTCEKDVLQG 451 500 ENSBTAP00000016326/1-1177 ELEAVKQAKL KLEEKNKELE EELRKARAEV EDAKQKAKDD DDSDIPTAQR ENSP00000262013/1-1321 ELEAVKQAKL KLEEKNRELE EELRKARAEA EDARQKAKDD DDSDIPTAQR ENSTTRP00000002567/1-1316 ELEAVKQAKL KLEEKNRELE EELRKARAEA EDARQKAKDD DDSDIPTAQR bmy_06702T0/1-940 ---------- ---------- ----KARAEA EDARQKAKDD DDSDIPTAQR BACU006444/1-1334 ELEAVKQAKL KLEEKNKELE EELRKARAEA EDARQKAKDD DDSDIPTAQR 501 550 ENSBTAP00000016326/1-1177 KRFTRVEMAR VLMERNQYKE RLMELQEAVR WTEMIRASRE NPAMQEKKRS ENSP00000262013/1-1321 KRFTRVEMAR VLMERNQYKE RLMELQEAVR WTEMIRASRE NPAMQEKKRS ENSTTRP00000002567/1-1316 KRFTRVEMAR VLMERNQYKE RLMELQEAVR WTEMIRASRE NPAMQEKKRS bmy_06702T0/1-940 KRFTRVEMAR VLMERNQYKE RLMELQEAVR WTEMIRASRE NPAMQEKKRS BACU006444/1-1334 KRFTRVEMAR VLMERNQYKE RLMELQEAVR WTEMIRASRE NPAMQEKKRS 551 600 ENSBTAP00000016326/1-1177 SIWQFFSRLF SSSSNTTKKP EPPVNLKYNA PTSHVTPSVK KRSSTLSQLP ENSP00000262013/1-1321 SIWQFFSRLF SSSSNTTKKP EPPVNLKYNA PTSHVTPSVK KRSSTLSQLP ENSTTRP00000002567/1-1316 SIWQFFSRLF SSSSNTTKKP EPPVNLKYNA PTSHVTPSVE K-----SSLS bmy_06702T0/1-940 SIWQFFSRLF SSSSNTTKKP EPPVNLKYNA PTSHVTPSVK KRSSTLSQLP BACU006444/1-1334 SIWQFFSRLF SSSSNTTKKP EPPVNLKYNA PTSHVTPSVK KRSSTLSQLP 601 650 ENSBTAP00000016326/1-1177 GDKSRAFDFL SEETEASLAS RREQKREQYR QVKAHVQKED GRVQAFGWSL ENSP00000262013/1-1321 GDKSKAFDFL SEETEASLAS RREQKREQYR QVKAHVQKED GRVQAFGWSL ENSTTRP00000002567/1-1316 PRDSKA-DFL SEETEASLAS RREQKREQYR QVKAHVQKED GRVQAFGWSL bmy_06702T0/1-940 GDKSKAFDFL SEETEASLAS RREQKREQYR QVKAHVQKED GRVQAFGWSL BACU006444/1-1334 GDKSKAFDFL SEETEASLAS RREQKREQYR QVKAHVQKED GRVQAFGWSL 651 700 ENSBTAP00000016326/1-1177 PQKYKQVTNG QGENKMKNLP VPVYLRPLDE KDASM-KLWC AVGVNLSGGK ENSP00000262013/1-1321 PQKYKQVTNG QGENKMKNLP VPVYLRPLDE KDTSM-KLWC AVGVNLSGGK ENSTTRP00000002567/1-1316 PQKYKQVTNG QGENKMKNLP VPVYLRPLDE KDTSMKKLWC AVGVSLSGGK bmy_06702T0/1-940 PQKYKQVTNG QGENKMKNLP VPVYLRPLDE KDTSM-KLWC AVGVSLSGGK BACU006444/1-1334 PQKYKQVTNG QGENKMKNLP VPVYLRPLDE KDTSM-KLWC AVGVSLSGGK 701 750 ENSBTAP00000016326/1-1177 TRDGGSVVGA SVFYKDVAGL EAEGSKQRSA SQNSLDKLDQ ELKEQQKELK ENSP00000262013/1-1321 TRDGGSVVGA SVFYKDVAGL DTEGSKQRSA SQSSLDKLDQ ELKEQQKELK ENSTTRP00000002567/1-1316 TRDGGSVVGA SVFYKDVAGL DAEGSEQRSA SQSSLDKLDQ ELKEQQKELK bmy_06702T0/1-940 TRDGGSVVGA SVFYKDIAGL DAEGSEQRSA SQSSLDKLDQ ELKEQQKELK BACU006444/1-1334 TRDGGSVVGA SVFYKDVAGL DAEGSEQRSA SQSSLDKLDQ ELKEQQKELK 751 800 ENSBTAP00000016326/1-1177 NQEELSSLVW ICTSTHSATK VIIIDAVQPG NILDSFTVCN SHVLCISSVP ENSP00000262013/1-1321 NQEELSSLVW ICTSTHSATK VLIIDAVQPG NILDSFTVCN SHVLCIASVP ENSTTRP00000002567/1-1316 NQEELSSLVW ICTSTHSATK VIIIDAVQPG NILDSFTVCN SHVLCIASVP bmy_06702T0/1-940 NQEELSSLVW ICTSTHSATK VIIIDAVQPG NILDSFTVCN SHVLCIASVP BACU006444/1-1334 NQEELSSLVW ICTSTHSATK VIIIDAVQPG NILDSFTVCN SHVLCIASVP 801 850 ENSBTAP00000016326/1-1177 GARETDYPAG EELSESGQVD KASLCGSMTS NSSAETDSLL GGITVVGCSA ENSP00000262013/1-1321 GARETDYPAG EDLSESGQVD KASLCGSMTS NSSAETDSLL GGITVVGCSA ENSTTRP00000002567/1-1316 GARETDYPAG EELSESGQVD KASLCGSMTS NSSAETDSLL GGITVVGCST bmy_06702T0/1-940 GARETDYPAG EELSESGQVD KASLCGSMTS NSSAETDSLL GGITVVGCSA BACU006444/1-1334 GARETDYPAG EELSESGQVD KASLCGSMTS NSSAETDSLL GGITVVGCSA 851 900 ENSBTAP00000016326/1-1177 EGVTAAATSP NTNEPSPVME KPPEKETENS EIDENVPTAE EATEATEGNA ENSP00000262013/1-1321 EGVTGAATSP STNGASPVMD KPPEMEAENS EVDENVPTAE EATEATEGNA ENSTTRP00000002567/1-1316 EGVTAAATSP STNGTSPVIE KPPEKETENS EVDENVPTAE EATEATEGNA bmy_06702T0/1-940 EGVTAAATSP STNGTSPVIE KPPEKETENS EVDENVPTAE EATEATEGNA BACU006444/1-1334 EGVTAAATSP STNGTSPVIE KPPEKETENS EVDENVPTAE EATEATEGNA 901 950 ENSBTAP00000016326/1-1177 GSAEDTVDVS QTGVYTEHVF TDPLGVQIPE DLSPVYQSSN DSDAYKDQIS ENSP00000262013/1-1321 GSAEDTVDIS QTGVYTEHVF TDPLGVQIPE DLSPVYQSSN DSDAYKDQIS ENSTTRP00000002567/1-1316 GSAEDTVDIS QTGVYTEHVF TDPLGVQIPE DLSPVYQSSN DSDAYKDQIS bmy_06702T0/1-940 GSAEDTVDIS QTGVYTEHVF TDPLGVQIPE DLSPVYQSSN DSDAYKDQIS BACU006444/1-1334 GSAEDTVDIS QTGVYTEHVF TDPLGVQIPE DLSPVYQSSN DSDAYKDQIS 951 1000 ENSBTAP00000016326/1-1177 VLPNEQDLVR EEAQKMSSLL PTMWLGAQNG CLYVHSSVAQ WRKCLHSIKL ENSP00000262013/1-1321 VLPNEQDLVR EEAQKMSSLL PTMWLGAQNG CLYVHSSVAQ WRKCLHSIKL ENSTTRP00000002567/1-1316 VLQNEQDLMR EEAQKMSSLL PTMWLGAQNG CLYVHSSVAQ WRKCLHSIKL bmy_06702T0/1-940 VLQNEQDLVR EEAQKMSSLL PTMWLGAQNG CLYVHSSVAQ WRKCLHSIKL BACU006444/1-1334 VLQNEQDLVR EEAQKMSSLL PTMWLGAQNG CLYVHSSVAQ WRKCLHSIKL 1001 1050 ENSBTAP00000016326/1-1177 KDSILSIVHV KGIVLVALAD GTLAIFHRGV DGQWDLSNYH LLDLGRPHHS ENSP00000262013/1-1321 KDSILSIVHV KGIVLVALAD GTLAIFHRGV DGQWDLSNYH LLDLGRPHHS ENSTTRP00000002567/1-1316 KDSILSIVHV KGIVLVALAD GTLAIFHRGV DGQWDLSNYH LLDLGRPHHS bmy_06702T0/1-940 KDSILSIVHV KGIVLVALAD GTLAIFHRGV DGQWDLSNYH LLDLGRPHHS BACU006444/1-1334 KDSILSIVHV KGIVLVALAD GTLAIFHRGV DGQWDLSNYH LLDLGRPHHS 1051 1100 ENSBTAP00000016326/1-1177 IRCMTVVHDK VWCGYRNKIY VVQPKAMKIE KSFDAHPRKE SQVRQLAWVG ENSP00000262013/1-1321 IRCMTVVHDK VWCGYRNKIY VVQPKAMKIE KSFDAHPRKE SQVRQLAWVG ENSTTRP00000002567/1-1316 IRCMTVVHDK VWCGYRNKIY VVQPKAMKIE KSFDAHPRKE SQVRQLAWVG bmy_06702T0/1-940 IRCMTV---- ---------- ---------- KSFDAHPRKE SQVRQLAWVG BACU006444/1-1334 IRCMTVVHDK VWCGYRNKIY VVQPKAMKIE KSFDAHPRKE SQVRQLAWVG 1101 1150 ENSBTAP00000016326/1-1177 DGVWVSIRLD STLRLYHAHT YQHLQDVDIE PYVSKMLGTG KLGFSFVRIT ENSP00000262013/1-1321 DGVWVSIRLD STLRLYHAHT YQHLQDVDIE PYVSKMLGTG KLGFSFVRIT ENSTTRP00000002567/1-1316 DGVWVSIRLD STLRLYHAHT YQHLQDVDIE PYVSKMLGTG KLGFSFVRIT bmy_06702T0/1-940 DGVWVSIRLD STLRLYHAHT YQHLQDVDIE PYVSKMLGTG KLGFSFVRIT BACU006444/1-1334 DGVWVSIRLD STLRLYHAHT YQHLQDVDIE PYVSKMLGTG KLGFSFVRIT 1151 1200 ENSBTAP00000016326/1-1177 ALMVSCNRLW VGTGNGVIIS IPLTETVILH QGRLLGLRAN KTSGASGNRP ENSP00000262013/1-1321 ALMVSCNRLW VGTGNGVIIS IPLTET---- ---------N KTSGVPGNRP ENSTTRP00000002567/1-1316 ALMVSCNRLW VGTGNGVIIS IPLTET---- ---------N KTSGASGNRP bmy_06702T0/1-940 ALMVSCNRLW VGTGNGVIIS IPLTES---- ---------- ---------- BACU006444/1-1334 ALMVSCNRLW VGTGNGVIIS IPLTETVILH QGRLLGLRAN KTSGASGNRP 1201 1250 ENSBTAP00000016326/1-1177 GSVIRVYGDE NSDKVTPGTF IPYCSMAHAQ LCFHGHRDAV KFFVAVPGQV ENSP00000262013/1-1321 GSVIRVYGDE NSDKVTPGTF IPYCSMAHAQ LCFHGHRDAV KFFVAVPGQV ENSTTRP00000002567/1-1316 GSVIRVYGDE NSDKVTPGTF IPYCSMAHAQ LCFHGHRDAV KFFVAVPGQV bmy_06702T0/1-940 ---------- ---------- ---------- ---------- ---------- BACU006444/1-1334 GSVIRVYGDE NSDKVTPGTF IPYCSMAHAQ LCFHGHRDAV KFFVAVPGQV 1251 1300 ENSBTAP00000016326/1-1177 ISPQSGSSGT DLTVDKAGPS AQEPGIQTPL KSVLVISGGE GYIDFRMGDE ENSP00000262013/1-1321 ISPQSSSSGT DLTGDKAGPS AQEPGSQTPL KSMLVISGGE GYIDFRMGDE ENSTTRP00000002567/1-1316 ISPQSGSSGT DLTVDRAGPS AQEPGSQTPL KSMLVISGGE GYIDFRMGDE bmy_06702T0/1-940 ---------- ---------- ---------- ---------- KYV-FR---- BACU006444/1-1334 ISPQSGSSGT DLTADRAGPS AQEPGSQTPV KSMLVISGGE GYIDFRMGDE 1301 1350 ENSBTAP00000016326/1-1177 GGESELLGED LPLEPSVAKA ERSHLIVWQV MYGSE ENSP00000262013/1-1321 GGESELLGED LPLEPSVTKA ERSHLIVWQV MYGNE ENSTTRP00000002567/1-1316 GGESELLGED LPLEPSVAKA ERSHLIVWQV MYGSE bmy_06702T0/1-940 ---------- ---------- ---------- ----- BACU006444/1-1334 GGESELLGED LPLEPSVAKA ERSHLIVWQV MYGSE