KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:56 2014 Check: 00 .. Name: BACU014128/1-136 Len: 432 Check: 3312 Weight: 1.00 Name: bmy_17603T0/1-415 Len: 432 Check: 1006 Weight: 1.00 Name: ENSTTRP00000008270/1-232 Len: 432 Check: 3704 Weight: 1.00 Name: ENSBTAP00000016362/1-422 Len: 432 Check: 9318 Weight: 1.00 // 1 50 BACU014128/1-136 MYPNPLVYCT CWDP------ ---WNLGPRK LTETPQPPRK TSPVKSKSAV bmy_17603T0/1-415 -QPRRPLTCH VPQPSRLLHL LGSLELGTTE TNRDPSATKK DLPSEVQANS ENSTTRP00000008270/1-232 -----LVYCP CWDP------ ---WNLGPRK LIETPRPPRK TSPVKSKLTP ENSBTAP00000016362/1-422 MYPNPLVYCT CWDP------ ---WNLGPRK LIKTPQPPSK TSSVKPKLSP 51 100 BACU014128/1-136 YL-------I FHLDAQ---- ---------- --------EV INMSPGYRFV bmy_17603T0/1-415 SSSSFKKQKL CPTDNKICCR PK-------- --------EV INMSPGYRFV ENSTTRP00000008270/1-232 PPPASKKQNY AQLITKSVIA P--------- --------EI INVSPGYRFV ENSBTAP00000016362/1-422 LPPAGKKQNY AQLITKPVVS PKMKVHLGKQ EESNKLPNEV INVSPGYCLI 101 150 BACU014128/1-136 RNREQISVTL GDEMSDRKKH SESDSMDKVR ISR------- ---------- bmy_17603T0/1-415 RNREQISVTL GDEMSDRKKH SESENMDKVR NSRTAIITDL EEQISELTVI ENSTTRP00000008270/1-232 RNREQICVTL GDEMSARKKH SESENMDKVR TSRTAIITDL EEQISELTAI ENSBTAP00000016362/1-422 RNREQISVTL GDEMFDRKKH SESEDVGKVK ISRTDIIADL KEQISELTVI 151 200 BACU014128/1-136 ---------- ---------- ---------- ---------- ---------- bmy_17603T0/1-415 IEQMNRDHRS AQKLLSNEMD LRCAEMQKNF ESKRRELEEA HAAQLSELEK ENSTTRP00000008270/1-232 IEQMNRAHRS AQKLLANEMD LRCAEMQKNF ESKRRKLEET HAAQLSELEK ENSBTAP00000016362/1-422 IEQMNRDHRS AQKLLSNEMD LRCAEMQKNF ESKTRELEEA HAAQLSELEK 201 250 BACU014128/1-136 ---------- ---------- ---------- ---------- ---------- bmy_17603T0/1-415 NYKATLKAEK LAAQDKLEEM GKEYKYLKNM FHIYQNSIYD EMEDKWSKKK ENSTTRP00000008270/1-232 NYKAALKAEK LAAQDKLEDM GKEYKYLKNM FHIYQDSIYD GME-KWSEKK ENSBTAP00000016362/1-422 NYKAALKAEK LAAQDKLEEM GKEYKYLKNM FHIYQDSIYD EMEDKWSKKK 251 300 BACU014128/1-136 ---------- ---------- ---------- ---------- ---------- bmy_17603T0/1-415 AEWEKDEKLE WEKILLQQKR KITKKFELES EEEKKKIHDS YSAIFENFNR ENSTTRP00000008270/1-232 AEWEK----E WEKILLQQ-- ---------- ---------- ---------- ENSBTAP00000016362/1-422 AEWEKDEKLE RERILLQQKH KITRKFELES EEERKKINES YTAIFENFNQ 301 350 BACU014128/1-136 ---------- ---------- ---------- ---------- ---------- bmy_17603T0/1-415 EKEELLKQHE RDTLQLEELR KTKEVIEEEL HAQGLILESL NTTLYQTQME ENSTTRP00000008270/1-232 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016362/1-422 EKEELLKQHE RDTLQLEELR KTKEVIEEEL YAQALILESL NTTLYQTQME 351 400 BACU014128/1-136 ---------- ---------- ---------- ---------- -QKTIAKNEE bmy_17603T0/1-415 LQKEKAMVAN LEKTLQTKLA EAEENFKYTI QHLTEENIHL RQKIIAKNEE ENSTTRP00000008270/1-232 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000016362/1-422 LQREKAVVAT LEKTLQIKLT EAEDKFKYTI HNLTEENIHL RQKIIAKNEE 401 450 BACU014128/1-136 IFDERSGKST SVTIYEHNSD ILEDGGNETQ ES bmy_17603T0/1-415 IFDERSGKSN SVTIYEHNSD ILEDGGNETQ ES ENSTTRP00000008270/1-232 ---------- ---------- ---------- -- ENSBTAP00000016362/1-422 IYDERFGRST SVTVYEHNSD TLEDGGNETQ E-