KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:58:57 2014 Check: 00 .. Name: ENSP00000307701/1-268 Len: 340 Check: 2675 Weight: 1.00 Name: ENSBTAP00000016375/1-268 Len: 340 Check: 2048 Weight: 1.00 Name: ENSTTRP00000001136/1-251 Len: 340 Check: 1887 Weight: 1.00 Name: bmy_20422T0/1-336 Len: 340 Check: 1091 Weight: 1.00 Name: BACU010598/1-222 Len: 340 Check: 7634 Weight: 1.00 // 1 50 ENSP00000307701/1-268 ---------- ---------- -------MSG KHYKGPEVS- ---------- ENSBTAP00000016375/1-268 ---------- ---------- -------MSG KHYKGPEVS- ---------- ENSTTRP00000001136/1-251 ---------- ---------- ---------- ---VGP---- ---------- bmy_20422T0/1-336 MQLGKWKRLV LSPNSQTLFG KSQLRQEILE QDYKGNSLSD LLAVAYKVSV BACU010598/1-222 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000307701/1-268 ---------- ---------- ---CCIKYFI FGFNVIFWFL GITFLGIGL- ENSBTAP00000016375/1-268 ---------- ---------- ---CCIKYFI FGFNVIFWFL GIAFLGIGL- ENSTTRP00000001136/1-251 ---------- ---------- ---CC----- ---XVIFWFL GIAFLGIGL- bmy_20422T0/1-336 TPRCEWLRPR QVDPSQISLK PERVTTLTLV FSTPPSQWTA SLTFNLIKIK BACU010598/1-222 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000307701/1-268 ---------- WAWNEKGVLS NISSITDLGG FDPVWLFLVV GGVMFILGFA ENSBTAP00000016375/1-268 ---------- WAWNEKGVLS NISSITDLGG FDPVWLFLVV GGVMFILGFA ENSTTRP00000001136/1-251 ---------- WAWNEKGVLS NISSITDLGG FDPVWLFLVV GGVMFILGFA bmy_20422T0/1-336 LTPPPGTLLC VLFRFQGVLS NISSITDLGG FDPVWLFLVV GGVMFILGFA BACU010598/1-222 ---------- -----QGVLS NISSITDLGG FDPVWLFLVV GGVMFILGFA 151 200 ENSP00000307701/1-268 GCIGALRENT FLLKFFSVFL GIIFFLELTA GVLAFVFKDW IKDQLYFFIN ENSBTAP00000016375/1-268 GCIGALRENT FLLKFFSVFL GIIFFLELTA GVLAFVFKDW IKDQLYFFIN ENSTTRP00000001136/1-251 GCIGALRENT FLLKFFSVFL GIIFFLELTA GVLAFVFKDW IKDQLYFFIN bmy_20422T0/1-336 GCIGALRENT FLLKFFSVFL GIIFFLELTA GVLAFVFKDW IKDQLYFFIN BACU010598/1-222 GCIGALRENT FLLKFFSVFL GIIFFLELTA GVLAFVFKDW IKDQLYFFIN 201 250 ENSP00000307701/1-268 NNIRAYRDDI DLQNLIDFTQ EYWQCCGAFG ADDWNLNIYF NCTDSNASRE ENSBTAP00000016375/1-268 NNIRAYRDDI DLQNLIDFTQ EYWQCCGAFG ADDWNLNIYF NCTDSNASRE ENSTTRP00000001136/1-251 NNIRAYRDDI DLQNLIDFTQ EYWQCCGAFG ADDWNLNIYF NCTDSNASRE bmy_20422T0/1-336 NNIRAYRDDI DLQNLIDFTQ EYWQCCGAFG ADDWNLNIYF NCTDSNASRE BACU010598/1-222 NNIRAYRDDI DLQNLIDFTQ EYWQCCGAFG ADDWNLNIYF NCTDSNASRE 251 300 ENSP00000307701/1-268 RCGVPFSCCT KDPAEDVINT QCGYDARQKP EVDQQIVIYT KGCVPQFEKW ENSBTAP00000016375/1-268 RCGVPFSCCT KDPAEDVINT QCGYDARQKP EVDQQIVIYT KGCVPQFEKW ENSTTRP00000001136/1-251 RCGVPFSCCT KDPAEDVINT QCGYDARQKP EVDQQIVIYT KGCVPQFEKW bmy_20422T0/1-336 RCGVPFSCCT KDPAEDVINT QCGYDARQKP EVDQQIVIYT KGCVPQFEKW BACU010598/1-222 RCGVPFSCCT KDPAEDVINT QCGYDARQKP EVDQQIVIYT KGCVPQFEKW 301 350 ENSP00000307701/1-268 LQDNLTIVAG IFIGIALLQI FGICLAQNLV SDIEAVRASW ENSBTAP00000016375/1-268 LQDNLTIVAG IFIGIALLQI FGICLAQNLV SDIEAVRASW ENSTTRP00000001136/1-251 LQDNLTIVAG IFIGIALLQI FGICLAQNLV SDIEAVRASW bmy_20422T0/1-336 LQDNLTIVAG IFIGIALLQV -RWMLQGNDA LG-EPSPG-- BACU010598/1-222 LQDNLTIVAG IFIGIALLQN -DW-FERNVL TA-CPLVATL