KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:58:59 2014 Check: 00 .. Name: ENSBTAP00000016384/1-340 Len: 392 Check: 5784 Weight: 1.00 Name: ENSP00000296327/1-340 Len: 392 Check: 8947 Weight: 1.00 Name: bmy_02316T0/1-379 Len: 392 Check: 3781 Weight: 1.00 Name: ENSTTRP00000012037/1-340 Len: 392 Check: 8797 Weight: 1.00 // 1 50 ENSBTAP00000016384/1-340 MEPDRTQIRL DPRYTADLLE ILKTNYSVPS ACFSYPPTAA QLLR------ ENSP00000296327/1-340 MEPGRTQIKL DPRYTADLLE VLKTNYGIPS ACFSQPPTAA QLLR------ bmy_02316T0/1-379 ---------- ---YTADLLE LLKTNYSIPS ACFSHPPTAA QLLREPTGVI ENSTTRP00000012037/1-340 MEPDRTQIKL DPRYTADLLE VLKTNYSIPS ACFSHPPTAA QLLR------ 51 100 ENSBTAP00000016384/1-340 ---------- ---------- ---------- ---------A LGPVDISLMV ENSP00000296327/1-340 ---------- ---------- ---------- ---------A LGPVELALTS bmy_02316T0/1-379 SVEVIEKEAT ELNSNSNAKP VIWSPREGSH WSLPSLSTLA LGPXEISLTV ENSTTRP00000012037/1-340 ---------- ---------- ---------- ---------A SGPVEISLTV 101 150 ENSBTAP00000016384/1-340 IMTLFVLGSI AIFLEAAVYL HKNTRCPIKR KTLIWCSSSP TIVSAFSCFG ENSP00000296327/1-340 ILTLLALGSI AIFLEDAVYL YKNTLCPIKR RTLLWKSSAP TVVSVLCCFG bmy_02316T0/1-379 IMTLLALGSV AIFLEDAVYL YKNTYCPIKR KTLIWSSSAP TVVSVFCCFG ENSTTRP00000012037/1-340 IMTLLALGSV AIFLEDAVYL YKNTYCPIKR KTLLWSSSAP TIVSVFCCFG 151 200 ENSBTAP00000016384/1-340 LWIPRALTLV EMAITTFYSM CFYLLMQAMV EGFGGKEAVL RTLKDTPVMI ENSP00000296327/1-340 LWIPRSLVLV EMTITSFYAV CFYLLMLVMV EGFGGKEAVL RTLRDTPMMV bmy_02316T0/1-379 LWIPRALMLV EMAITSFYAM CFYLLMQVMV EGFGGKEAVV RTLKDTPVMI ENSTTRP00000012037/1-340 LWIPRALMLV EMAITSFYAM CFYLLMHVMV EGFGGKEAVV RTL-NTPVMI 201 250 ENSBTAP00000016384/1-340 HTGPCCCCCP CCPRIKITRK RLQLLLLGPI QYAFFKISLT LVGLFLIPDG ENSP00000296327/1-340 HTGPCCCCCP CCPRLLLTRK KLQLLMLGPF QYAFLKITLT LVGLFLVPDG bmy_02316T0/1-379 HTGPCCCCCP CCPQLMLTRK KLQLLMLGPF QYVFFKITLS LVGLFLLPDG ENSTTRP00000012037/1-340 HTGPCCCCCP CCPQLMLTRK KLQLLMLGPF QYAFFKITLS LVGLFLLPDG 251 300 ENSBTAP00000016384/1-340 IFDPSDISEG STALWINTFL GVSTLSALWT IGIIFRQARL HLGEQNIGAK ENSP00000296327/1-340 IYDPADISEG STALWINTFL GVSTLLALWT LGIISRQARL HLGEQNMGAK bmy_02316T0/1-379 IYDPADLSEK STALWINTFL GVSTLSALWT LAILFRQAKL HLGEQNIGAK ENSTTRP00000012037/1-340 IYDPADISEK STALWINVFL GVSTLLALWT LGILFRQAKL HLGEQNIGAK 301 350 ENSBTAP00000016384/1-340 FVLFQALLIL SALQPSIFSV LASGGQIACS PPFSSKIRSQ VMNCHLLILE ENSP00000296327/1-340 FALFQVLLIL TALQPSIFSV LANGGQIACS PPYSSKTRSQ VMNCHLLILE bmy_02316T0/1-379 FVLFQVLLIL TALQPSIFSV LANGGQIACS PPFSSKIRSQ VMNCHLLILE ENSTTRP00000012037/1-340 FVLFQVLLIL TALQPSIFSV LANGGQIACS PPFSSKIRSQ VMNCHLLILE 351 400 ENSBTAP00000016384/1-340 SFLITVLTRI YYRRKDDKLG YEPFSSPDQD LNLKA----- -- ENSP00000296327/1-340 TFLMTVLTRM YYRRKDHKVG YETFSSPDLD LNLKA----- -- bmy_02316T0/1-379 TFLITVLTRI YYRRKDDKVG YEPFSSPNLD LNLKAGGGLL GQ ENSTTRP00000012037/1-340 TFLITVLTRI YYRRKDDKVG YEPFSSPNLD LNLKAG---- --