KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 16:58:59 2014 Check: 00 ..
Name: ENSP00000406970/1-398 Len: 431 Check: 963 Weight: 1.00
Name: ENSBTAP00000016385/1-387 Len: 431 Check: 4350 Weight: 1.00
Name: bmy_11874T0/1-425 Len: 431 Check: 3199 Weight: 1.00
Name: ENSTTRP00000015621/1-401 Len: 431 Check: 7712 Weight: 1.00
//
1 50
ENSP00000406970/1-398 MDGVTPTLST IRGRTLESST LHVTPRSLDR NKDQITNIFS GFAGLLAILL
ENSBTAP00000016385/1-387 MDVTTSAWSE TTRRISEPST LQGTLGSLDK AEDHSSSIFS GFAALLAILL
bmy_11874T0/1-425 MDVTIPTRSE IRGRTSQPST LQGTLSSPDR AKDHYSSIFS GFAGLLAILL
ENSTTRP00000015621/1-401 MDVTIPTRSE IRARTSQPST LQGTLGSPDT AKDHNSSIFS GFAGLLAILL
51 100
ENSP00000406970/1-398 VVAVFCILWN WNKRKKRQVP YLRVTVMPLL TLPQTRQRAK NIYDILPWRQ
ENSBTAP00000016385/1-387 VVAVICVLWC CGKRKKRQVP YLRVTIMPLL TLPRPRQRAK NIYDLLPRRQ
bmy_11874T0/1-425 VVAVFCILWN WSKWKKRQVP YFQVTVMPLL TLPRPRQGTK NIYDLLPRRQ
ENSTTRP00000015621/1-401 VVAVFCILWN WSKWKKWRVP YFQVTVMPLL TLPRPRQGAK NIYDLLPRRQ
101 150
ENSP00000406970/1-398 EDLGRHESRS MRIFSTESLL SRNSESP--E HVPSQAGNAF QEHTAHIHAT
ENSBTAP00000016385/1-387 EELGRHPSRS IRIVSTESLL SRNSDSPSSE HVPSRAGDAL HMHRAHTHAM
bmy_11874T0/1-425 DELGRHPSRS IRIFSTESLL SRNSDSPPSE HVPSQAGDAL HVHRAHTHAM
ENSTTRP00000015621/1-401 EELGRHPSRS IRIFSTESLL SRNSDSPPSE HVPSQAGDAL HVHRAHTHAM
151 200
ENSP00000406970/1-398 EYAVGIYDNA MVPQMCGNLT PSAHCINVRA SRDCASISSE DSHDYVNVPT
ENSBTAP00000016385/1-387 GYAVGIYDNA MRPQMCGNLA PSPHYVNVRA SRGSPSTSSE DSRDYVNIPT
bmy_11874T0/1-425 GYAVGIYDNA MGPQMCGNLT PSAHYVNVRA SRDCPSTSSE DSRDYVNIPT
ENSTTRP00000015621/1-401 GYAVGIYDNT MGPQMYGNLT PSAHYVNVRA SRDCPSTSSE DSRDYVNIPT
201 250
ENSP00000406970/1-398 AEEIAETLAS TKSPSRNLFV LPSTQKLEFT EERDEGCGDA GDCTSLYSPG
ENSBTAP00000016385/1-387 AKEIAETLAS ASNPPRNLFI LPGTKELAPS EEIDEGCGNA SDCTSLGSPG
bmy_11874T0/1-425 AKEIAETLAS TNSPPGNLFI LPSTKVLELT EEIDEGCGNA SDCTSLGSPG
ENSTTRP00000015621/1-401 AKEIAENLAS TNSPPGNLFI LPSSKVLELT EEIDEGCGNT SDCTSLGSPG
251 300
ENSP00000406970/1-398 AEDSDSLSNG EGSSQISNDY VNMTGLDLSA IQERQLWVAF QCCRDYENVP
ENSBTAP00000016385/1-387 TENSDPLSDG EGSSQTSNDY VNMAELDLGT PQGKQLQGMF QCRRDYENVP
bmy_11874T0/1-425 TESSDPLNDG EGSSQTSNDY VNMAVLDLET IQGKQPWGTF QCCRDYENVP
ENSTTRP00000015621/1-401 TESSYPLNDG EGSSQTSNDY VNMAVLDLET IQGKQPWGTF QCCRDYENVP
301 350
ENSP00000406970/1-398 AADPSGSQQQ AEKDVPSSNI GHVEDKTDDP GTHVQCVKR- -TFLASGDYA
ENSBTAP00000016385/1-387 -PGPSSNKQQ EE-EVTSSNT DHVEGRTDGP ETHTPPAVQS GSFLALKDHV
bmy_11874T0/1-425 -PDPSGNQQQ EEKEATSSNT DHVEGRTDGP ETHIQPVMQS GSFLGLKDYV
ENSTTRP00000015621/1-401 -PDPSGNQQR EEKEVTSSNT DHVEGRTDGP ETHIQPVMQS GSFLALKDYV
351 400
ENSP00000406970/1-398 DFQPFTQSED SQMKHREEMS NEDSSDYENV LTAKLGGRDS EQGPGTQLLP
ENSBTAP00000016385/1-387 ACQSSAHSET GPWEDAEETS SEDSHDYENV CAAEAGARG- ----------
bmy_11874T0/1-425 TYQSSAQSEN SQMKHGEEMS NEDSHDYKNV -----GGRDF EQGPDTWLLP
ENSTTRP00000015621/1-401 AYQSSAQSEN SQMKHGEEMS NEDSHDYKNV -AAKVGARDI EQGPDTWLLP
401 450
ENSP00000406970/1-398 DE-------- ---------- ---------- -
ENSBTAP00000016385/1-387 ---------- ---------- ---------- -
bmy_11874T0/1-425 DELRPSHPAG KPHGVVYPAG SIAITGSSED P
ENSTTRP00000015621/1-401 DEL------- ---------- ---------- -