KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:02 2014 Check: 00 .. Name: ENSP00000361311/1-277 Len: 294 Check: 6834 Weight: 1.00 Name: ENSBTAP00000016415/1-294 Len: 294 Check: 2488 Weight: 1.00 Name: ENSTTRP00000005438/1-257 Len: 294 Check: 457 Weight: 1.00 Name: bmy_16024T0/1-278 Len: 294 Check: 984 Weight: 1.00 Name: BACU000339/1-218 Len: 294 Check: 7191 Weight: 1.00 // 1 50 ENSP00000361311/1-277 MASAELDYTI EIPDQPCWSQ KNSPSPGGKE AETRQPVVIL LGWGGCKDKN ENSBTAP00000016415/1-294 MASAQLDYTI EIPDQPCRSQ ENSPDQGGKE AGTRLPLVIL LGWGGCSDKN ENSTTRP00000005438/1-257 ---------- ---------- -NSPNQGGKE AGTRQPLVIL LGWGGCTDKN bmy_16024T0/1-278 MASAQLDYTI EIPDQPCRSQ EHSPNQGGKE AGTRQPLVIL LGWGGCTDKN BACU000339/1-218 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000361311/1-277 LAKYSAIYHK RGCIVIRYTA PWHMVFFSES LGIPSLRVLA QKLLELLFDY ENSBTAP00000016415/1-294 LAKYSAIYHK RGCIVIRYTA PWHMVFFSET LGIPSLRVLA QKLLELLFDY ENSTTRP00000005438/1-257 LAKYSAIYHK RGCIVIRYTA PWHMVFFSES LGIPSLRVLA QKLLELLFDY bmy_16024T0/1-278 LAKYSAIYHK RGCIVIRYTA PWHMVFFSES LGIPSLRVLA QKLLELLFDY BACU000339/1-218 ---------- QGCIVIRYTA PWHMVFFSES LGIPSLRVLA QKLLELLFDY 101 150 ENSP00000361311/1-277 EIEKEPLLFH VFSNGGVMLY RYVLELLQT- RRFCRLRVVG TIFDSAPGDS ENSBTAP00000016415/1-294 EVEKEPLLFH VFSNAGVMLY RYVLELLQTH QRFCHLRVVG TIFDSGPGDS ENSTTRP00000005438/1-257 EVEKEPLLFH VFSNAGVMLY RYVLELLQTH RRFCHLRVVG TIFDSGPGDG bmy_16024T0/1-278 EVEKEPLLFH VFSNAGVMLY RYVLELLQTH RRFCHLRVVG TIFDSGPGDG BACU000339/1-218 EVEKEPLLFH VFSNAGVMLY RYVLELLQTH RRFCHLRVVG TIFDSGPGDG 151 200 ENSP00000361311/1-277 NLVGALRALA AILERRAAML RLLLLVAFAL VVVLFHVLLA PITALFHTHF ENSBTAP00000016415/1-294 NLLGALRALA VVLEHRPAAL RLLLLVAFTL VAFLFHVLLA PLTALFHTHF ENSTTRP00000005438/1-257 NLLGALRALA AILEPRPAAL RLLLLVAFAL VAVLFHVLLA PLTSLFHTHF bmy_16024T0/1-278 NLLGALRALA AVLEHRPAAL RLLLLMAFAL VAVLFHVLLA PLTSLFHTHF BACU000339/1-218 NLLGALRALA AVLEHRPAAL RLLLLMAFAL VAVLFHVLLA PLTSLFHTHF 201 250 ENSP00000361311/1-277 YDRLQDAGSR WPELYLYSRA DEVVLARDIE RMVEARLARR VLARSVDFVS ENSBTAP00000016415/1-294 YDRLLDAASR WPELYLYSRA DEVVLARDVE RMVEARLAHQ VLVRSVDFVS ENSTTRP00000005438/1-257 YDRLLDAASR WPELYLYSRA DEVVLARDVE RMVEARLAHR VLVHSVDFKS bmy_16024T0/1-278 YDRLLDAASR WPELYLYSRA DEVVLARDVE RMVEARLAHQ VLVHSVDFVS BACU000339/1-218 YDRLLDAASR WPELYLYSRA DEVVLARDVE RMVEARLAHR VLVHSVDFVS 251 300 ENSP00000361311/1-277 SAHVSHLRDY PTYYTSLCVD FMRNCVRC-- ---------- ---- ENSBTAP00000016415/1-294 SAHVSHLRDY PTYYTTLCIN FMHSCVHCSG PCPPHLTSAP EINA ENSTTRP00000005438/1-257 SAHVSHLRDY PTYYTSLCVN FMRSCVRC-- ---------- ---- bmy_16024T0/1-278 SAHVSHLRDY PTYYTSLCVN FMRSCVQC-- ---------- ---- BACU000339/1-218 SAHVSHLRDY PTYYTSLCVN FMRSCVQC-- ---------- ----