KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:04 2014 Check: 00 .. Name: ENSP00000368517/1-303 Len: 416 Check: 9214 Weight: 1.00 Name: ENSTTRP00000002000/1-296 Len: 416 Check: 9650 Weight: 1.00 Name: bmy_16935T0/1-413 Len: 416 Check: 7605 Weight: 1.00 Name: ENSBTAP00000016423/1-300 Len: 416 Check: 6040 Weight: 1.00 // 1 50 ENSP00000368517/1-303 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002000/1-296 ---------- ---------- ---------- ---------- ---------- bmy_16935T0/1-413 WVRSPVETWA CDPRLGFARC PERSKRSGPT RPRAPRSAQS PRSLALSSAA ENSBTAP00000016423/1-300 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000368517/1-303 ---------M AAVAVLRAFG ASGPMCLRRG PWAQLPARFC SRDPAGAGRR ENSTTRP00000002000/1-296 ---------M AAAAGLRALG VKGSGWLRRG PWPPLTAGFC SGGPAGVGRP bmy_16935T0/1-413 SDPGASLAAM ATAAGLRALG AKGSGWLRRG PWPLLTAGFC SGGPAGIGRP ENSBTAP00000016423/1-300 ---------M AAAAGLRALG AKGSGWLRRG PWAPLTTGFC SGGPAGIGRP 101 150 ENSP00000368517/1-303 ESEPRPTSAR QLDGIRNIVL SNPKKRNALS LAMLKSLQSD ILHDADSNDL ENSTTRP00000002000/1-296 EPGSRPASTR QRDGIRSIVL SDPKRRNALS LATLR-LQND ILHDAESQDL bmy_16935T0/1-413 EPGSRPTSTR QRDGIRSIVL SDPKRRNALS LATLRSLQND ILHEAESQDL ENSBTAP00000016423/1-300 EPGPRPTIAR QQDGIRSIVL SDPKRRNALS LAMLKSLQSD ILHEAESQDL 151 200 ENSP00000368517/1-303 KVIIIS---- ---------- ---------- ---------- ---------- ENSTTRP00000002000/1-296 KAIIIS---- ---------- ---------- ---------- ---------- bmy_16935T0/1-413 KVIIISVLTR LSTEMRIFFN GARKGAIFCP ILSLLFFHHS SPQLWLFTSL ENSBTAP00000016423/1-300 KVIIIS---- ---------- ---------- ---------- ---------- 201 250 ENSP00000368517/1-303 ---------- AEGPVFSSGH DLKELTEEQG RDYHAEVFQT CSKVMMHIRN ENSTTRP00000002000/1-296 ---------- AEGPVFSSGH D-KELTDEHG PDYHAEVFRT CSEVMMLIQT bmy_16935T0/1-413 SFLCSTGNIA AEGPVFSSGH DLKELTDEHG PDYHAEVFRT CSEVMMLIQN ENSBTAP00000016423/1-300 ---------- AEGPVFSSGH DLKELTDEQG PDYHAEVFQT CSEVMMLIQN 251 300 ENSP00000368517/1-303 HPVPVIAMVN GLAAAAGCQL VASCDIAVAS DKSSFATPGV NVGLFCSTPG ENSTTRP00000002000/1-296 HPVPII-MVN GLATAAGCQL VASCDIAVAS DKFSFAMPGV NIGLFCSTPR bmy_16935T0/1-413 HPVPVIAMVN GLASAAGCQL VASCDIAVAS DKSSFAAPGV NIGLFCSTPG ENSBTAP00000016423/1-300 HPVPIIAMVN GLATAAGCQL VASCDIAVAS DKSSFAMPGV NIGVFCSTPA 301 350 ENSP00000368517/1-303 VALARAVPRK VALEMLFTGE PISAQEALLH GLLSKVVPEA ELQEETMRIA ENSTTRP00000002000/1-296 VALGRAVPRK VALEVLFTGE PVSAREALLH RLLSRVVPE- ---DETTQMA bmy_16935T0/1-413 VALGRAVPRK VALEMLFTGE PISAREALLH GLLSRVVPEE RLEEETLRIA ENSBTAP00000016423/1-300 VALGRAVPRK VALEMLFTGE PISAQEALLH GLLSRVVPEE RLEEETMRIA 351 400 ENSP00000368517/1-303 RKIASLSRPV VSLGKATFYK QLPQDLGTAY YLTSQAMVDN LALRDGQEGI ENSTTRP00000002000/1-296 RKVASPGRPV LSLGKAALYG QLARDLRTAC HLTSQTMVDN LGLPDAQEGV bmy_16935T0/1-413 RKVASLSRPV LSLGKAAFYR QLAQDLRTAY HLTSQTMVDN LGLPDGQEGV ENSBTAP00000016423/1-300 RKVASLSRSV LSLGKAAFYR QLAQDLRTAY HLTSQTMVDN LGLPDGQEGV 401 450 ENSP00000368517/1-303 TAFLQKRKPV WSHEPV ENSTTRP00000002000/1-296 KAFLQKRKPV WSHAAS bmy_16935T0/1-413 KAFLQKRKPV WSH--- ENSBTAP00000016423/1-300 KAFLQKRKPV WSH---