KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:05 2014 Check: 00 .. Name: ENSP00000384774/1-921 Len: 956 Check: 6895 Weight: 1.00 Name: ENSBTAP00000016432/1-918 Len: 956 Check: 5105 Weight: 1.00 Name: bmy_04421T0/1-871 Len: 956 Check: 9319 Weight: 1.00 Name: BACU019413/1-897 Len: 956 Check: 5049 Weight: 1.00 Name: ENSTTRP00000007770/1-920 Len: 956 Check: 6151 Weight: 1.00 // 1 50 ENSP00000384774/1-921 MGQICQRESA TAAEKPKLHL LAESEIDKYL YAMRLSDETL IDIMTRFRKE ENSBTAP00000016432/1-918 ----MIAAQL LAYYFTELKD DQVKKIDKYL YAMRLSDETL LDIMNRFKKE bmy_04421T0/1-871 ---------- ---------- ---------- ---------- ---------- BACU019413/1-897 ---------- ---------- ----QIDKYL YAMRLSDETL LDIMARFRKE ENSTTRP00000007770/1-920 MGQACQRGWG AATGSPIQPP LAQSKIDKYL YAMRLSDETL LDIMARFKKE 51 100 ENSP00000384774/1-921 MKNGLSRDFN PTATVKMLPT FVRSIPDGSE KGDFIALDLG GSSFRILRVQ ENSBTAP00000016432/1-918 MKNGLSRDFN PTATVKMLPT FVRSIPDGSE KGDFIALDLG GSSFRILRVQ bmy_04421T0/1-871 ---------- ---------- ---------E KGDFIALDLG GSSFRILRVQ BACU019413/1-897 MKNGLSRDFN PTATVKMLPT FVRSIPDGSE KGDFIALDLG GSSFRILRVQ ENSTTRP00000007770/1-920 MKNGLSRDFN PTATVKMLPT FVRSIPDGSE KGDFIALDLG GSSFRILLVQ 101 150 ENSP00000384774/1-921 VNHEKNQNVH MESEVYDTPE NIVHGSGSQL FDHVAECLGD FMEKRKIKDK ENSBTAP00000016432/1-918 VNHEQNQAVH MESEVYDTPE NIMHGSGSQL FDHVAECLGD FMEKKKIKDK bmy_04421T0/1-871 VNHEQKQTVH MESEVYDTPE NIMHGSGSQL FDHVAECLGD FMEKKKIKDK BACU019413/1-897 VNHEQKQTVH MESEVYDTPE NIMHGSGSQL FDHVAECLGD FMEKKKIKDK ENSTTRP00000007770/1-920 VNHEQKQTVH MESEVYDTPE SIMHGSGSQL FGHVAECLGD FMEKKKIKDK 151 200 ENSP00000384774/1-921 KLPVGFTFSF PCQQSKIDEA ILITWTKRFK ASGVEGADVV KLLNKAIKKR ENSBTAP00000016432/1-918 KLPVGFTFSF PCRQSRIDEA ILITWTKRFK ASGVEGTDVV KLLDKAIKKR bmy_04421T0/1-871 KLPVGFTFSF PCRQSKIDEA ILITWTKRFK ASGVEGTDVV KLLEKAIKKR BACU019413/1-897 KLPVGFTFSF PCRQSKIDEA ILITWTKRFK ASGVEGTDVV KLLEKAIKKR ENSTTRP00000007770/1-920 KLPVGFTFSF PCRQSKIDEA ILITWTKRFK ASGVEGTDVV KLLEKAIKKH 201 250 ENSP00000384774/1-921 GDYDANIVAV VNDTVGTMMT CGYDDQHCEV GLIIGTGTNA CYMEELRHID ENSBTAP00000016432/1-918 GDYDANIVAV VNDTVGTMMT CGYDDQQCEV GLIIGTGTNA CYMEELRHID bmy_04421T0/1-871 GDYDANVVAV VNDTVGTMMT CGYDDQQCEV GLIIGTGTNA CYMEELRHID BACU019413/1-897 GDYDANVVAV VNDTVGTMMT CGYDDQQCEV GLIIGTGTNA CYMEELRHID ENSTTRP00000007770/1-920 GDYDANVVAV VNDTVGTMMT CGYDDQQCEV GLIIGTGTNA CYMEELRHID 251 300 ENSP00000384774/1-921 LVEGDEGRMC INTEWGAFGD DGSLEDIRTE FDREIDRGSL NPGKQLFEKM ENSBTAP00000016432/1-918 LVEGDEGRMC VNTEWGAFGD DGALEDIRTE FDREIDRGSL NPGKQLFEKM bmy_04421T0/1-871 LVEGDEGRMC INTEWGAFGD DGALEDIRTE FDREIDRGSL NPGKQLFEKM BACU019413/1-897 LVEGDEGRMC INTEWGAFGD DGALEDIRTE FDREIDRGSL NPGKQLFEKM ENSTTRP00000007770/1-920 LVEGDEGRMC INTEWGAFGD DGALEDIRTE FDREIDRGSL NPGKQLFEKM 301 350 ENSP00000384774/1-921 VSGMYLGELV RLILVKMAKE GLLFEGRITP ELLTRGKFNT SDVSAIEKNK ENSBTAP00000016432/1-918 VSGMYLGELV RLILVKMAKE GLLFEGRITP ELLTRGKFNT SDVSAIEKNK bmy_04421T0/1-871 VSGMYMGELV RLILVKMAKE GLLFEGRITP ELLTRGKFNT SDVSAIEKNK BACU019413/1-897 VSGMYMGELV RLILVKMAKE GLLFEGRITP ELLTRGKFNT SDVSAIEKNK ENSTTRP00000007770/1-920 VSGMYMGELV RLILVKMAKE GLLFEGRITP ELLTRGKFNT SDVSAIEKNK 351 400 ENSP00000384774/1-921 EGLHNAKEIL TRLGVEPSDD DCVSVQHVCT IVSFRSANLV AATLGAILNR ENSBTAP00000016432/1-918 EGLHNAKEIL TRLGVEPSDD DCVAVQHVCT IVSFRSANLV AATLGAILSR bmy_04421T0/1-871 EGLHNAREIL TRLGVEPSDD DCISVQHVCT IVSFRSANLV AATLGAILNR BACU019413/1-897 EGLHNAREIL TRLGVEPSDD DCISVQHVCT IVSFRSANLV AATLGAILNR ENSTTRP00000007770/1-920 EGLHNAREIL TRLGVEPSDD DCISVQHVCT IVSFRSANLV AATLGAILNR 401 450 ENSP00000384774/1-921 LRDNKGTPRL RT-------- ---------- ---------- ------TVGV ENSBTAP00000016432/1-918 LRDNKGTPRL RT-------- ---------- ---------- ------TVGV bmy_04421T0/1-871 LRDNKSTPRL RTTWMCCVTG VMRKASVENG IKVCKKKERG PREGVPTVRL BACU019413/1-897 LRDNKGTPRL RT-------- ---------- ---------- ------TVGV ENSTTRP00000007770/1-920 LRDNKSTPRL RT-------- ---------- ---------- ------TVGV 451 500 ENSP00000384774/1-921 DGSLYKTHPQ YSRRFHKTLR RLVPDSDVRF LLSESGSGKG AAMVTAVAYR ENSBTAP00000016432/1-918 DGSLYKTHPQ YSRRFHKTLR RLVPDCDVRF LLSESGSGKG AAMVTAVAYR bmy_04421T0/1-871 SRLLWPPHPR YSRRFHKTLR RLVPDCDVRF LLSESGSGKG AAMVTAVAYR BACU019413/1-897 DGSLYKTHPQ YSRRFHKTLR RLVPDCDVRF LLSESGSGKG AAMVTAVAYR ENSTTRP00000007770/1-920 DGSLYKTHPQ YSRRFHKTLR RLVPDCDVRF LLSESGSGKG AAMVTAVAYR 501 550 ENSP00000384774/1-921 LAEQHRQIEE TLAHFHLTKD MLLEVKKRMR AEMELGLRKQ THNNAVVKML ENSBTAP00000016432/1-918 LAEQHRQIEE TLAHFSLTKE MLLEVKKRMR AEMELGLGKQ THDKAVVKML bmy_04421T0/1-871 LAEQHRQIEE TLAHFHLTKD MLLEVKRRMR AEMELGLGKQ THDKAVVKML BACU019413/1-897 LAEQHRQIEE TLAHFSLTKD MLLEVKRRMR AEMELGLGKQ THDKAVVKML ENSTTRP00000007770/1-920 LAEQHRQIEE TLAHFSLTKD TLLEVKRRMR AEMELGLGKQ THDKAVVKML 551 600 ENSP00000384774/1-921 PSFVRRTPDG TENGDFLALD LGGTNFRVLL VKIRSGKKRT VEMHNKIYAI ENSBTAP00000016432/1-918 PSFVRSTPDG TENGDFLALD LGGTNFRVLL VKIRSGKKRS VEMHNKIYAI bmy_04421T0/1-871 PSFVRSTPDG TEHGDFLALD LGGTNFRVLL VKIRSGKKRT VEMHNKIYAI BACU019413/1-897 PSFVRSTPDG TEHGDFLALD LGGTNFRVLL VKIRSGKKRT VEMHNKIYAI ENSTTRP00000007770/1-920 PSFVRSTPDG TEHGDFLALD LGGTNFRVLL VKIRSGKKRT VEMHNKIYAI 601 650 ENSP00000384774/1-921 PIEIMQGTGE ELFDHIVSCI SDFLDYMGIK GPRMPLGFTF SFPCQQTSLD ENSBTAP00000016432/1-918 PIEIMQGTGE ELFDHIVSCI SDFLDYMGIK GPKMPLGFTF SFPCKQTSLD bmy_04421T0/1-871 PTEIMQGTGE ELFDHIVSCI SDFLDYMGIK GPRMPLGFTF SFPCKQTSLD BACU019413/1-897 PTEIMQGTGE ELFDHIVSCI SDFLDYMGIK GPRMPLGFTF SFPCKQTSLD ENSTTRP00000007770/1-920 PTEIMQGTGE ELFDHIVSCI SDFLDYMGIK GPRMPLGFTF SFPCKQTSLD 651 700 ENSP00000384774/1-921 AGILITWTKG FKATDCVGHD VVTLLRDAIK RREEFDLDVV AVVNDTVGTM ENSBTAP00000016432/1-918 AGILITWTKG FKATDCVGHD VATLLREAIK RREEFDLDVV AVVNDTVGTM bmy_04421T0/1-871 AGILITWTKG FKATDCVGQD VATLLRDA-- ---EFDLDVV AVVNDTVGTM BACU019413/1-897 AGILITWTKG FKATDCVGQD VATLLRDAVK RREEFDLDVV AVVNDTVGTM ENSTTRP00000007770/1-920 AGILITWTKG FKATDCVGQD VATLLRDAVK RREEFDLDVV AVVNDTVGTM 701 750 ENSP00000384774/1-921 MTCAYEEPTC EVGLIVGTGS NACYMEEMKN VEMVEGDQGQ MCINMEWGAF ENSBTAP00000016432/1-918 MTCAYEEPTC EVGLIVGTGS NACYMEEMKN VETLEGNQGQ MCINMEWGAF bmy_04421T0/1-871 MTCAYEEPTC EVGLIVGTGS NACYMEEMKN VETLEGNEGR MCINMEWGAF BACU019413/1-897 MTCAYEEPTC EVGLIVGTGS NACYMEEMKN VETLEGSEGR MCINMEWGAF ENSTTRP00000007770/1-920 MTCAYEEPTC EVGLIVGTGS NACYMEEMKN VETLAGNEGQ MCINMEWGAF 751 800 ENSP00000384774/1-921 GDNGCLDDIR THYDRLVDEY SLNAGKQRYE KMISGMYLGE IVRNILIDFT ENSBTAP00000016432/1-918 GDNGCLDDIR TIYDKLVDEF SLNSGKQRYE KMISGMYLGE IVRNILIDFA bmy_04421T0/1-871 GDNGCLDDIR TIYDKLVDDY SLNGGKQRYE KMISGMYLGE IVRNILIDFT BACU019413/1-897 GDNGCLDDIR TIYDKLVDEY SLNGGKQRYE KMISGMYLGE IVRNILIDFT ENSTTRP00000007770/1-920 GDNGCLDDIR TIYDKLVDEY SLNAGKQRYE KMISGMYLGE -VRNILIDFT 801 850 ENSP00000384774/1-921 KKGFLFRGQI SETLKTRGIF ETKFLSQIES DRLALLQVRA ILQQLGLNST ENSBTAP00000016432/1-918 KRGFLFRGQI SEPLKTRGLF QTKYLSQIES DRLALLQVRA ILQQLGLNST bmy_04421T0/1-871 KRGFLFRGQI SEPLKTRGIF QTKYLSQIES DRLALLQVRA ILQQLGLNST BACU019413/1-897 KRGFLFRGQI SEPLKTRGIF QTKYLSQIES DRLALLQVRA ILQQLGLNST ENSTTRP00000007770/1-920 KRGFLFRGQI SEPLKTRGIF QTKYLSQIES DRLALLQVRA ILQQLGLNST 851 900 ENSP00000384774/1-921 CDDSILVKTV CGVVSRRAAQ LCGAGMAAVV DKIRENRGLD RLNVTVGVDG ENSBTAP00000016432/1-918 CDDSILVKTV CGVVSKRAAQ LCGAGMAAVV DKIRENRGLD RLNVTVGVDG bmy_04421T0/1-871 CDDSILVKTV CGVVSKRAAQ LCGAGMAAVV DKIRENRGLD HLNVTVGVDG BACU019413/1-897 CDDSILVKTV CGVVSKRAAQ LCGAGMAAVV DKIRENRGLD HLNVTVGVDG ENSTTRP00000007770/1-920 CDDSILVKTV CGVVSKRAAQ LCGAGMAAVV DKIRENRGLD HLNVTVGVDG 901 950 ENSP00000384774/1-921 TLYKLHPHFS RIMHQTVKEL SPKCNVSFLL SEDGSGKGAA LITAVGVRLR ENSBTAP00000016432/1-918 TLYKLHPHFS RIMHQTVKEL SPKCNVSFLL SEDGSGKGAA LITAVGVRLR bmy_04421T0/1-871 TLYKLHPHFS RIMHQTVKEL SPKCNVSFLL SEDGSGKGAA LITAVGVRLR BACU019413/1-897 TLYKLHPHFS RIMHQTVKEL SPKCNVSFLL SEDGSGKGAA LITAVGVRLR ENSTTRP00000007770/1-920 TLYKLHPHFS RIMHQTVKEL SPKCNVSFLL SEDGSGKGAA LITAVGVRLR 951 1000 ENSP00000384774/1-921 TEASS- ENSBTAP00000016432/1-918 QEMSSS bmy_04421T0/1-871 QETSS- BACU019413/1-897 QETSS- ENSTTRP00000007770/1-920 QETSS-