KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:05 2014 Check: 00 .. Name: ENSTTRP00000007978/1-259 Len: 277 Check: 9515 Weight: 1.00 Name: ENSP00000286648/1-260 Len: 277 Check: 8023 Weight: 1.00 Name: BACU015737/1-258 Len: 277 Check: 2287 Weight: 1.00 Name: bmy_18435T0/1-277 Len: 277 Check: 8916 Weight: 1.00 Name: ENSBTAP00000016449/1-260 Len: 277 Check: 6866 Weight: 1.00 // 1 50 ENSTTRP00000007978/1-259 MATPPKRSCP SPAASSEGTR IKKISIEGNI ---------- -------XXX ENSP00000286648/1-260 MATPPKRSCP SFSASSEGTR IKKISIEGNI ---------- -------AAG BACU015737/1-258 MATPPKRSCP SPAASPEGTR IKKISIEGNI ---------- -------AAG bmy_18435T0/1-277 MATPPKRSCP SPAASSEGTR IKKISIEGNI EYDHMNFFCC FTFPLTTAAG ENSBTAP00000016449/1-260 MATPPKRSCP SPAASSEGTR IKKISIEGNI ---------- -------AAG 51 100 ENSTTRP00000007978/1-259 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXELTT SQKSGGNVLQ ENSP00000286648/1-260 KSTFVNILKQ LCEDWEVVPE PVARWCNVQS TQDEFEELTM SQKNGGNVLQ BACU015737/1-258 KSTFVNILKQ VCEDWEVVPE PVARWCNVQS AQDEFEELTT SQKSGGNVLQ bmy_18435T0/1-277 KSTFVNILKQ VCEDWEVVPE PVARWCNVQS TQDEFEELTT SQKSGGNVLQ ENSBTAP00000016449/1-260 KSTFVNILKQ VCEDWEVVPE PVARWCNVQS TQDEFEELTT SQKSGGNVLQ 101 150 ENSTTRP00000007978/1-259 MMYEKPERWS FTFQSYACLS RIRAQLAALN GKLKDAEKPV LFFERSVYSD ENSP00000286648/1-260 MMYEKPERWS FTFQTYACLS RIRAQLASLN GKLKDAEKPV LFFERSVYSD BACU015737/1-258 MMYEKPERWS FTFQSYACLS RIRAQLAALD GKLKDAEKPV LFFERSVYSD bmy_18435T0/1-277 MMYEKPERWS FTFQSYACLS RIRAQLAALN GKLKDAEKPV LFFERSVYSD ENSBTAP00000016449/1-260 MMYEKPERWS FTFQSYACLS RIRAQLAALN GKLKDAEKPV LFFERSVYSD 151 200 ENSTTRP00000007978/1-259 RYIFASNLYE SDCMNETEWT IYQDWHDWMN NQFGQSLELD GIIYLRATPE ENSP00000286648/1-260 RYIFASNLYE SECMNETEWT IYQDWHDWMN NQFGQSLELD GIIYLQATPE BACU015737/1-258 RYIFASNLYE SDCMNETEWT IYQDWHDWMN NQFGQSLELD GIIYLRATPE bmy_18435T0/1-277 RYIFASNLYE SDCMNETEWT IYQDWHDWMN NQFGQSLELD GIIYLRATPE ENSBTAP00000016449/1-260 RYIFASNLYE SDCMNETEWT IYQDWHDWMN NQFGQSLELD GIIYLRATPE 201 250 ENSTTRP00000007978/1-259 KCLNRIYLRG RNEEQGIPLE YLEKLHYKHE SWLLHRTVKT NFDYLQEVPI ENSP00000286648/1-260 TCLHRIYLRG RNEEQGIPLE YLEKLHYKHE SWLLHRTLKT NFDYLQEVPI BACU015737/1-258 KCLNRIYLRG RNEEQGIPLE YLEKLHYKHE SWLLHRTLKT NFDYLQEVPI bmy_18435T0/1-277 KCLNRIYLRG RNEEQGIPLE YLEKLHYKHE SWLLHRTLKT NFDYLQEVPI ENSBTAP00000016449/1-260 KCLNRIYLRG RNEEQGIPLE YLEKLHYKHE SWLLHRTLKT NFDYLQEVPI 251 300 ENSTTRP00000007978/1-259 LTLDVNEDFK DKHDSL-EKV KEFLSTL ENSP00000286648/1-260 LTLDVNEDFK DKYESLVEKV KEFLSTL BACU015737/1-258 LTLDVNEDFK DNHDSLVEKI PVPVS-- bmy_18435T0/1-277 LTLDVNEDFK DKHDSLVEKV KEFLSTL ENSBTAP00000016449/1-260 LTLDVNEDFK DKHDSLIEKV KDFLSTL