KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:59:10 2014  Check: 00 ..

 Name: ENSP00000376992/1-163     Len:    165  Check:  1019  Weight:  1.00
 Name: ENSBTAP00000016482/1-162  Len:    165  Check:  1913  Weight:  1.00
 Name: ENSTTRP00000011718/1-165  Len:    165  Check:  8788  Weight:  1.00
 Name: bmy_17295T0/1-158         Len:    165  Check:  3137  Weight:  1.00
 Name: BACU019931/1-161          Len:    165  Check:  6407  Weight:  1.00

//


                          1                                                   50
ENSP00000376992/1-163     MKSSQTFEEQ TECIVNTLLM DFLSPTLQVA SRNLCCVDEV DSGEPCSFDV 
ENSBTAP00000016482/1-162  -MSPRTFEEQ TECIVNALLT DFLGPAWEVG NRTLQCEDES DSGEVSSFDV 
ENSTTRP00000011718/1-165  MKSPQTFEEQ TECIIDSLLT DFLGPTCQVA NRTLRCADEV DSGEVCSFDV 
bmy_17295T0/1-158         MKSPRTFEEQ TECIVDSLLT DFLGPTCQVA NRTLHCADEP DSGEVCSFDV 
BACU019931/1-161          MKSPRTFEEQ TECIVDSLLT DFLGPTCQVA NRTLRCADEP DSGEVCSFDV 


                          51                                                 100
ENSP00000376992/1-163     AIIAGRLRML GDQFNGELEA SAKNVIAETI KGQTGAILQD TVESLSKTWC 
ENSBTAP00000016482/1-162  AIIAGRLRML GDKFNGELEA SAKNVIAETI RGQAGIVLQN TVKSLSNAWC 
ENSTTRP00000011718/1-165  AIIAGRLRML GDKFNGELEA SAKNIIAETI QGQAGAILQD TVNSLSKAWC 
bmy_17295T0/1-158         AIIAGRLRML GDKFNGELEA AARNVIAETI QGQAGAVLQD TVKSLSKAWC 
BACU019931/1-161          AIIVGRLRIL GDKFNGELEA PARNIIAETI QGQAGSVLQD TVKSLSKAWC 


                          101                                                150
ENSP00000376992/1-163     AQDSSLAYER AFLAVSVKLL EYMAHIAPEV VGQVAIPMTG MINGNQAIRE 
ENSBTAP00000016482/1-162  AQDSSLAYER AFLAVSVKLL EHVARMAPEV ARQVVRPITN MINGNTAIRE 
ENSTTRP00000011718/1-165  AQDSSLAYER AFLAVSVKLL ECVVRMTPEM ARQVATPMTN MIIGNTAIRE 
bmy_17295T0/1-158         AQDSSLAYER AFLAVSVKLL EYVVRMTPEK ARQVATPMTN MINGNTAIRE 
BACU019931/1-161          AQDSSLAYER AFLAVSVKLL EYVVRMTPEM ARQVATPMTN MISGNTAIRE 


                          151                                                200
ENSP00000376992/1-163     FIQGQGGWEN LES-- 
ENSBTAP00000016482/1-162  YIQGQGGWEN LEG-- 
ENSTTRP00000011718/1-165  YIQGQGGWEN LESRR 
bmy_17295T0/1-158         YIQGQGGW-- ----- 
BACU019931/1-161          YIQGQGGWVS I----