KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:11 2014 Check: 00 .. Name: ENSP00000220584/1-417 Len: 417 Check: 2709 Weight: 1.00 Name: ENSBTAP00000016504/1-417 Len: 417 Check: 3891 Weight: 1.00 Name: ENSTTRP00000011344/1-417 Len: 417 Check: 2306 Weight: 1.00 Name: bmy_17305T0/1-282 Len: 417 Check: 8402 Weight: 1.00 Name: BACU015244/1-417 Len: 417 Check: 2810 Weight: 1.00 // 1 50 ENSP00000220584/1-417 MEFVKCLGHP EEFYNLVRFR IGGKRKVMPK MDQDSLSSSL KTCYKYLNQT ENSBTAP00000016504/1-417 MEFVKCLGHP EEFYNLLRFQ MGGRRKVIPK MDQDSLSSSL KTCYKYLNQT ENSTTRP00000011344/1-417 MEFVKCLGHP EEFYNLLRFQ MGGRRKVMPK MDQDSLSSSL KTCYKYLNQT bmy_17305T0/1-282 MEFVKCLGHP EEFYNLLRFQ MGGRQKVIPK MDQDSLSSSL KTCYKYLNQT BACU015244/1-417 MEFVKCLGHP EEFYNLLRFQ MGGRQKVIPK MDQDSLSSSL KTCYKYLNQT 51 100 ENSP00000220584/1-417 SRSFAAVIQA LDGEMRNAVC IFYLVLRALD TLEDDMTISV EKKVPLLHNF ENSBTAP00000016504/1-417 SRSFAAVIQA LDGEMRHAVC IFYLVLRALD TLEDDMTISI ERKVPLLHNF ENSTTRP00000011344/1-417 SRSFAAVIQA LDGEMRHAVC IFYLVLRALD TLEDDMTISI ERKVPLLHNF bmy_17305T0/1-282 SRSFAAVIQA LDGEMRHAVC IFYLVLRALD TLEDDMTISI ERKVPLLHNF BACU015244/1-417 SRSFAAVIQA LDGEMRHAVC IFYLVLRALD TLEDDMTISI ERKVPLLHNF 101 150 ENSP00000220584/1-417 HSFLYQPDWR FMESKEKDRQ VLEDFPTISL EFRNLAEKYQ TVIADICRRM ENSBTAP00000016504/1-417 HSYLYEPDWR FTESKEKDRQ VLEDFPTISL EFRNLAEKYQ TVIVDVCQKM ENSTTRP00000011344/1-417 HSYLYEPDWR FTESKEKDRQ VLEDFPTISL EFRNLAEKYQ TVIVDICRKM bmy_17305T0/1-282 HSYLYEPDWR FTESKEKDRQ VLEDFPTISL EFRNLAEKYQ TVIVDICRKM BACU015244/1-417 HSYLYEPDWR FTESKEKDRQ VLEDFPTISL EFRNLAEKYQ TVIVDICRKM 151 200 ENSP00000220584/1-417 GIGMAEFLDK HVTSEQEWDK YCHYVAGLVG IGLSRLFSAS EFEDPLVGED ENSBTAP00000016504/1-417 GFGMAEFLDK RVTSEREWDK YCHYVAGLVG IGLSRLFSAS ELEDPLIGED ENSTTRP00000011344/1-417 GFGMAEFLDK RVMSEREWDK YCHYVAGLVG IGLSRLFSAS ELEDPLIGED bmy_17305T0/1-282 GFGMAEFLDK RVASEREWDK ---------- ---------- ---------- BACU015244/1-417 GFGMAEFLDK RVTSEREWDK YCHYVAGLVG IGLSRLFSAS ELEDPLIGED 201 250 ENSP00000220584/1-417 TERANSMGLF LQKTNIIRDY LEDQQGGREF WPQEVWSRYV KKLGDFAKPE ENSBTAP00000016504/1-417 TERANSMGLF LQKTNIIRDY LEDQREGREF WPQETWSKYV KKLGDFAKPE ENSTTRP00000011344/1-417 TELANSMGLF LQKTNIIRDY LEDQREGREF WPQEAWSKYV NKLGDFAKPE bmy_17305T0/1-282 ---------- ---------- ---------- ----AWSKYV NKLGDFAKPE BACU015244/1-417 TELANSMGLF LQKTNIIRDY LEDQREGREF WPQEAWSKYV NKLGDFAKPE 251 300 ENSP00000220584/1-417 NIDLAVQCLN ELITNALHHI PDVITYLSRL RNQSVFNFCA IPQVMAIATL ENSBTAP00000016504/1-417 NIDLAVQCLN ELITNTLHHI PDVITYLSRL RNQSIFNFCA IPQVMAIATL ENSTTRP00000011344/1-417 NMDLAVQCLN ELIASTLHHI PDVITYLSRL RNQSIFNFCA IPQVMAIATL bmy_17305T0/1-282 NMDLAVQCLN ELIASTLHHI PDVITYLSRL RNQSIFNFCA IPQVMAIATL BACU015244/1-417 NVDLAVQCLN ELIASTLHHI PDVITYLSRL RNQSIFNFCA IPQVMAIATL 301 350 ENSP00000220584/1-417 AACYNNQQVF KGAVKIRKGQ AVTLMMDATN MPAVKAIIYQ YMEEIYHRIP ENSBTAP00000016504/1-417 AACYNNQQVF KGVVKIRKGQ AVTLMMDATN MPAVKAIIHQ YMEEIYHRIP ENSTTRP00000011344/1-417 AACYNNQQVF KGVVKIRKGQ AVTLMMDATN MPAVKAIIHQ YMEEIYHRIP bmy_17305T0/1-282 AACYNNQQVF KGVVKIRKGQ AVTLMMDATN MPAVKAIIHQ YMEE------ BACU015244/1-417 AACYNNQQVF KGVVKIRKGQ AVTLMMDATN MPAVKAIIHQ YMEEIYHRIP 351 400 ENSP00000220584/1-417 DSDPSSSKTR QIISTIRTQN LPNCQLISRS HYSPIYLSFV MLLAALSWQY ENSBTAP00000016504/1-417 NSDPCSTKTQ QIISTIRTQN LPNCQLVSRS HYSPIYLSFV MLLAALSWQY ENSTTRP00000011344/1-417 NSDPCSTKTR QIISTIRSQN LPNCQLISRS HYSPIYLSFV MLLAALSWQY bmy_17305T0/1-282 ---------- ---------- ---------- ---------- -------WT- BACU015244/1-417 NSDPCSAKTR QIISTIRTQN LPNCQLISRS HYSPISLSFV MLLVALSWQY 401 450 ENSP00000220584/1-417 LTTLSQVTED YVQTGEH ENSBTAP00000016504/1-417 LSTLSQVTED YVQTGEH ENSTTRP00000011344/1-417 LSTLSQVTED YVQTGER bmy_17305T0/1-282 ---------- ------- BACU015244/1-417 LSALSQVTEG CVQTGEH