KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:11 2014 Check: 00 .. Name: ENSP00000215904/1-296 Len: 296 Check: 4992 Weight: 1.00 Name: ENSBTAP00000016505/1-296 Len: 296 Check: 8096 Weight: 1.00 Name: ENSTTRP00000016551/1-216 Len: 296 Check: 9335 Weight: 1.00 Name: bmy_01142T0/1-217 Len: 296 Check: 2683 Weight: 1.00 // 1 50 ENSP00000215904/1-296 MARCERLRGA ALRDVLGRAQ GVLFDCDGVL WNGERAVPGA PELLERLARA ENSBTAP00000016505/1-296 MARCERLRGA ALRDVVGRAQ GVLFDCDGVL WNGERAVPGA PELLERLAQA ENSTTRP00000016551/1-216 MARCERLRGA TLRDVLGRAQ GVLFDCDGVL WNGERAVPGA PELLERLARA bmy_01142T0/1-217 MARCERLRGA ALRDVLGRAQ GVLFDCDGVL WNGERAVPGA PELLERLARA 51 100 ENSP00000215904/1-296 GKAALFVSNN SRRARPELAL RFARLGFGGL RAEQLFSSAL CAARLLRQRL ENSBTAP00000016505/1-296 GKATLFVSNN SRRARPELAL RFARLGFGGL RSEQLFSSAL CAARLLRQRL ENSTTRP00000016551/1-216 GKATLFVSNN SRRARPELAL RFARLGFGGL RAEQLFSSAL CAARFLRQRQ bmy_01142T0/1-217 GKAALF---- ---------- ---------- ---------- ---------- 101 150 ENSP00000215904/1-296 PGPPDAPGAV FVLGGEGLRA ELRAAGLRLA GDPSAGDGAA PRVRAVLVGY ENSBTAP00000016505/1-296 LGPPDTQGAV FVLGGEGLRA ELRAAGLRLA GDPSEDPGAA PRVRAVLVGY ENSTTRP00000016551/1-216 LGPPDAQGAV FVLGGEGLRA ELRAAGLRLA GDPDEDPGSA PRVRAVLVGY bmy_01142T0/1-217 ---------- ---------- ---------- -----DPGSA PRVRAVLVGY 151 200 ENSP00000215904/1-296 DEHFSFAKLR EACAHLRDPE CLLVATDRDP WHPLSDGSRT PGTGSLAAAV ENSBTAP00000016505/1-296 DEHFSFAKLS EACAHLRDPD CLLVATDRDP WHPLSDGSRT PGTGSLAAAV ENSTTRP00000016551/1-216 DEHFSFAKLS EACAHLRDPD CLLVATDRDP WHPLSDGSRT PGTGSLAAAV bmy_01142T0/1-217 DEHFSFAKLS EACAHLRDPD CLLVATDRDP WHPLSDGSRT PGTGSLAAAV 201 250 ENSP00000215904/1-296 ETASGRQALV VGKPSPYMFE CITENFSIDP ARTLMVGDRL ETDILFGHRC ENSBTAP00000016505/1-296 ETASGRQALV VGKPSPYMFE CITEHFSVDP GRTLMVGDRL ETDILFGHRC ENSTTRP00000016551/1-216 ETAS-RQALV VGKPSPY--- ---------- ---------- ---------- bmy_01142T0/1-217 ETASGRQALV VGKPSPYMFE CITEHFSVDP SRILMVGDRL ETDILFGHRC 251 300 ENSP00000215904/1-296 GMTTVLTLTG VSRLEEAQAY LAAGQHDLVP HYYVESIADL TEGLED ENSBTAP00000016505/1-296 GMTTVLTLTG VSSLEEAQAY LAAGQHDLVP HYYVESIADL MEGLED ENSTTRP00000016551/1-216 ---------- ---------- ---------- ---------- ------ bmy_01142T0/1-217 GMTTVLTLTG VSCLEEAQAY LAAGQHDLVP HYYVESIADM MEGLED