KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:59:16 2014 Check: 00 .. Name: ENSP00000391668/1-709 Len: 714 Check: 3258 Weight: 1.00 Name: ENSTTRP00000004947/1-609 Len: 714 Check: 8219 Weight: 1.00 Name: ENSBTAP00000016579/1-665 Len: 714 Check: 1242 Weight: 1.00 Name: bmy_19731T0/1-700 Len: 714 Check: 3084 Weight: 1.00 // 1 50 ENSP00000391668/1-709 MWWGGRGQSF NIAPQKEEPE MG-----SVQ ENRMPEPRSR QPSSCLASRC ENSTTRP00000004947/1-609 ---------- ---------- ---------- ---MP----- ---------- ENSBTAP00000016579/1-665 ---------- ---------- ---------- ---MPEPRSR QLGSCLASGG bmy_19731T0/1-700 MWWGGRGQSF NVAPQKEEPE MGLSGPKSVL GSGMPEPRSH QLGSCLASGC 51 100 ENSP00000391668/1-709 LPGEQILAWA PGVRKGLEPE LSGTLICTNF RVTFQPCGWQ WNQDTPLNSE ENSTTRP00000004947/1-609 ---------- P--------- ---------- RVTFQPCGWQ RSEETPLSSE ENSBTAP00000016579/1-665 LPGEQILAWA PGVRKGLEPE MPGTLICSNL RVTFQPHGWQ RSQETPLSSE bmy_19731T0/1-700 LPGEQILAWA PGVRKGLEPE LPGTLICSNL RVTFQPCGWQ RSEETPLSSE 101 150 ENSP00000391668/1-709 YDFALVNIGR LEAVSGLSRV QLLRPGSLHK FIPEEILIHG RDFRLLRVGF ENSTTRP00000004947/1-609 YDFSLANIGR LEAXXXXXXX XXXXXXXXXX XXXXXXXXXX QDFRLLRVGF ENSBTAP00000016579/1-665 YDFSLANIGR LEAVHGPSRV QLLRPGSLLK FIPEEILIHG QDFRLLRVGF bmy_19731T0/1-700 YDFSLANIGR LEAVNGLSRV QLLRPGSLLK FIPEEILIHG QDFRLLRVGF 151 200 ENSP00000391668/1-709 EAGGLEPQAF QVTMAIVQAR AQSNQAQQYS GITLSKAGQG SGSRKPPIPL ENSTTRP00000004947/1-609 EAGGLEPQAF QVTMAIVQAR AQNSQAQQYA GITLSKAGQS SGSRKPPIPL ENSBTAP00000016579/1-665 EAGGLEPQAF QVTMAIVQAR AQNSPAQQYA GITLSQAGQS SDSRKPPIPL bmy_19731T0/1-700 EAGGLEPQAF QVTMAIVQAR AQNSQAQQYA GITLSKAGQS SVSRKPPIPL 201 250 ENSP00000391668/1-709 METAEDWETE RKKQAARGWR VSTVNERFDV ATSLPRYFWV PNRILDSEVR ENSTTRP00000004947/1-609 LETSEDWEIE RKKQGARGWR VSTVNERFDV ATSLPRYFWV PNRTLDSEVR ENSBTAP00000016579/1-665 LETIEDWETE RKKQAARGWR VSTVNERFDV ATSLPRYFWV PNRTLDSEVR bmy_19731T0/1-700 LETSEDWEIE RXKQGARGWR VSTVNERFDV ATSLPRYFWV PNRTLDSEVR 251 300 ENSP00000391668/1-709 RAFGHFHQGR GPRLSWHHPG GSDLLRCGGF YTASDPNKED IRAVELMLQA ENSTTRP00000004947/1-609 RAFGHFHQSR GPRLSWHHPG GSDLLRCGGF YTASDPNKDD IRVVESMFQA ENSBTAP00000016579/1-665 RAFGHFHQGR GPRLSWHHPG GSDLLRCGGF YTASDPNKED IRAVESMLQA bmy_19731T0/1-700 RAFGHFHQGR GPRLSWHHPG GSDLLRCGGF YTASDPNKED IRVVESMLQA 301 350 ENSP00000391668/1-709 GHSDVVLVDT MDELPSLADV QLAHLRLRAL CLPDSSVAED KWLSALEGTR ENSTTRP00000004947/1-609 GHSDIVLVDT MDELPSLADV QLAHLRLRAL CLPDSSVAED KWLSALDGTR ENSBTAP00000016579/1-665 GHSDVVLVDT MDELPSLADV QLAHLRLRAL CLPDSSVAED KWFSALEGTR bmy_19731T0/1-700 GHSDVVLVDT MDELPSLADV QLAHLRLRAL CLPDSSVAED KWLSALDGTR 351 400 ENSP00000391668/1-709 WLDYVRACLR KASDISVLVT SRVRSVILQE RGDRDLNGLL SSLVQLLSAP ENSTTRP00000004947/1-609 WLDYVRSCLR KASDISVLVT SRVRSVVLQE RGDRDFNGLL SSLVQLLSAP ENSBTAP00000016579/1-665 WLDYTRSCLR KASDISVLVT SRVRSVVLQE RGDRDFNGLL SSLVQLLSAP bmy_19731T0/1-700 WLDYVRSCLR KASDISVLVT SRVRSVVLQE RGDRDFNGLL SSLVQLLSAP 401 450 ENSP00000391668/1-709 EARTLFGFQS LVQREWVAAG HPFLTRLGGT GASEEAPVFL LFLDCVWQLL ENSTTRP00000004947/1-609 EARTLLGFQS LVQREWVAAG HPFLTRLGGT GASEEAPVFL LFLDCVWQLL ENSBTAP00000016579/1-665 EARTLLGFQS LVQREWVAAG HPFLTRLGGS GASEEAPVFL LFLDCVWQLL bmy_19731T0/1-700 EARTLLGFQS LVQREWVAAG HPFLTRLGGT GASEEAPVFL LFLDCVWQLL 451 500 ENSP00000391668/1-709 QQFPADFEFS EFFLLALHDS VRVPDTLTFL RNTPWERGKQ SGQLNSYTQV ENSTTRP00000004947/1-609 QQSPAEFEFS EFFLLALHDS VRVPDTLTFL RDTPWERGKQ SGQFNTYTQV ENSBTAP00000016579/1-665 QQFPAEFEFS EFFLLALHDS VRVPDTLTFL RDTPWERGKQ SGQFNNYTQV bmy_19731T0/1-700 QQSPAEFEFS EFFLLALHDS VRVPDTLTFL RDTPWERGKQ SGQFNTYTQV 501 550 ENSP00000391668/1-709 YTPGYSQPPA GNSFNLQLSV WDWDLRYSNA QILQFQNPGY DPEHCPDSWL ENSTTRP00000004947/1-609 YTAGYSQPPA GNSVNPQLSV WDWDLRYSKE QILQFHNLGY DPEHCPDSWL ENSBTAP00000016579/1-665 YTPGF--PGA GNSINPQLSV WDWNLRYSNK QILQFRNPGY DPEHCPDSWL bmy_19731T0/1-700 YTAGYSQTPA GNSVNPQLSV WDWDLRYSKE QILQFHNLGY DPEHCPDSWL 551 600 ENSP00000391668/1-709 PRPQPSFMVP GPPSSVWLFS RGALTPLNQL CPWRDSPSLL AVSSRWLPRP ENSTTRP00000004947/1-609 PRQQPSFMVP GPPSSVWLFS RGALTPLNQL CPWRDSPSLL AVSSRWLPRP ENSBTAP00000016579/1-665 PRQQPSFMVP GPPSSVWLFS RGSLTPLNQL CPWRDSPSLL AVSSRWLPRP bmy_19731T0/1-700 PRQQPSFMVP GPPSSLWLFS RGALTPLNQL CPWRDSPSLL AVSSRWLPRP 601 650 ENSP00000391668/1-709 AISSESLADQ EWGLPSHWGA CPLPPGLLLP GYLGPQIRLW RRCYLRGRPE ENSTTRP00000004947/1-609 AISSESLADQ EWGLPSHWGA CPLPPGLLLP GYLGPQIRLW RRCYLRGRPE ENSBTAP00000016579/1-665 AISSESLADQ EWGLPSHWGA CPLPPGLLLP GCLGPQIRLW RRCYLRGRPE bmy_19731T0/1-700 AISSESLADQ EWGLPSHWGA CPLPPGLLLP GYLGPQIRLW RRCYLRGRPE 651 700 ENSP00000391668/1-709 VQMGLSAPTI SGLQDELSHL QELLRKWTPR ISPEDHSKKR DPHTILNPTE ENSTTRP00000004947/1-609 VQMGLSAPTI SGLQAELAHL QELLRKWTPR ISPEDH---- ---------- ENSBTAP00000016579/1-665 VQMGLSAPTI SGLQEELSHL QELLRKWTPR ISPEDHSKRR NPNTILSQSR bmy_19731T0/1-700 VQMGLSAPTI SGLQAELAHL QELLRKWTPR ISPEDHSKKR NPNTVLSQSR 701 750 ENSP00000391668/1-709 IAGILKGRAE GDLG ENSTTRP00000004947/1-609 ---------- ---- ENSBTAP00000016579/1-665 ---------- ---- bmy_19731T0/1-700 ---------- ----