KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:16 2014 Check: 00 .. Name: ENSTTRP00000005720/1-391 Len: 392 Check: 6 Weight: 1.00 Name: bmy_02852T0/1-233 Len: 392 Check: 8306 Weight: 1.00 Name: ENSP00000350844/1-391 Len: 392 Check: 1234 Weight: 1.00 Name: BACU019106/1-353 Len: 392 Check: 4720 Weight: 1.00 Name: ENSBTAP00000016584/1-261 Len: 392 Check: 7160 Weight: 1.00 // 1 50 ENSTTRP00000005720/1-391 MDLEKNYPTP RT-GRTGHGG VNQLGGVFVN GRPLPDVVRQ RIVELAHQGV bmy_02852T0/1-233 MEIHCKH-DP FA-SMHRHGG VNQLGGVFVN GRPLPDVVRQ RIVELAHQGV ENSP00000350844/1-391 MDLEKNYPTP RT-SRTGHGG VNQLGGVFVN GRPLPDVVRQ RIVELAHQGV BACU019106/1-353 ---------- -----SGHGG VNQLGGVFVN GRPLPDVVRQ RIVELAHQGV ENSBTAP00000016584/1-261 ADLKNIPLSP RSRSVSGHGG VNQLGGVFVN GRPLPDVVRQ RIVELAHQGV 51 100 ENSTTRP00000005720/1-391 RPCDISRQLR VSHGCVSKIL GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02852T0/1-233 RPCDISRQLR VSHGCVSKIL GRYYETGSIK PGVIGGSKPK VATPKVVEKI ENSP00000350844/1-391 RPCDISRQLR VSHGCVSKIL GRYYETGSIK PGVIGGSKPK VATPKVVEKI BACU019106/1-353 RPCDISRQLR VSHGCVSKIL GRYYETGSIK PGVIGGSKPK VATPKVVEKI ENSBTAP00000016584/1-261 RPCDISRQLR VSHGCVSKIL GRYYETGSIK PGVIGGSKPK VATPKVVEKI 101 150 ENSTTRP00000005720/1-391 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXSSINRII RTKVQQPPNQ bmy_02852T0/1-233 AEYKRQNPTM FAWEIRDRLL AERVCDNDTV PSVSSINRII RTKVQQPPNQ ENSP00000350844/1-391 AEYKRQNPTM FAWEIRDRLL AERVCDNDTV PSVSSINRII RTKVQQPPNQ BACU019106/1-353 AEYKRQNPTM FAWEIRDRLL AERVCDNDTV PSVSSINRII RTKVQQPPNQ ENSBTAP00000016584/1-261 AEYKRQNPTM FAWEIRDRLL AERVCDNDTV PSVSSINRII RTKVQQPPNQ 151 200 ENSTTRP00000005720/1-391 PVPASSHSIX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_02852T0/1-233 PVPASSHSIV STGSVTQVSS VSTDSAGSSY SISGILGITS PSADTNKRKR ENSP00000350844/1-391 PVPASSHSIV STGSVTQVSS VSTDSAGSSY SISGILGITS PSADTNKRKR BACU019106/1-353 PVPASSHSIV STGSVTQVSS VSTDSAGSSY SISGILGITS PSADTNKRKR ENSBTAP00000016584/1-261 PVPASSHSIV STGSVTQVSS VSTDSAGSSY SISGILGITS PSADTNKRKR 201 250 ENSTTRP00000005720/1-391 XXXIQESPVP NGHSLTGRDF LRKQMRGDLF TQQQLEVLDR VFERQHYSDI bmy_02852T0/1-233 DEGKRRRRCP SGMGLSG--- ---------- ---------- ---------- ENSP00000350844/1-391 DEGIQESPVP NGHSLPGRDF LRKQMRGDLF TQQQLEVLDR VFERQHYSDI BACU019106/1-353 DEGIQESPVP NGHSLPGRDF LRKQMRGDLF TQQQLEVLDR VFERQHYSDI ENSBTAP00000016584/1-261 DEGIQESPVP NGHSLPGRDF LRKQMRGDLF TQQQLEVLDR VFERQHYSDI 251 300 ENSTTRP00000005720/1-391 FTTAEPIKPE QTADYSTMAS LAGGLDDMKA NLTSPTPADI GSSVPGPQSY bmy_02852T0/1-233 ---------- ---------- ---------- ---------- ---------- ENSP00000350844/1-391 FTTTEPIKPE QTTEYSAMAS LAGGLDDMKA NLASPTPADI GSSVPGPQSY BACU019106/1-353 FTTAEPIKPE QTADYSTMAS LAGGLDDMKA NLTSPTPADI GSSVPGPQSY ENSBTAP00000016584/1-261 FTTAEPIKPE Q--------- ---------- ---------- ---------- 301 350 ENSTTRP00000005720/1-391 PIVTGRDLAS TTLPGYPPHV PPAGQGSYSA PTLTGMVPGS EFSGSPYSHP bmy_02852T0/1-233 ---------- ---------- ---SVGSVSR PSVRG----- ---GSTDAH- ENSP00000350844/1-391 PIVTGRDLAS TTLPGYPPHV PPAGQGSYSA PTLTGMVPGS EFSGSPYSHP BACU019106/1-353 PIVTGRDLAS TTLPGYPPHV PPAGQGSYSA PTLTGMVPGS EFSGSPYSHP ENSBTAP00000016584/1-261 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000005720/1-391 QYPSYNDSWR FPNPGLLGSP YYYSAAARGA APPAAATAYD RH bmy_02852T0/1-233 ---------- ---------- ---------- ---------- -- ENSP00000350844/1-391 QYSSYNDSWR FPNPGLLGSP YYYSAAARGA APPAAATAYD RH BACU019106/1-353 QYPSYNDSWR FPNPGLLG-- ---------- ---------- -- ENSBTAP00000016584/1-261 ---------- ---------- ---------- ---------- --