KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:18 2014 Check: 00 .. Name: ENSP00000254066/1-462 Len: 630 Check: 3004 Weight: 1.00 Name: ENSBTAP00000016586/1-462 Len: 630 Check: 2941 Weight: 1.00 Name: BACU007033/1-462 Len: 630 Check: 1365 Weight: 1.00 Name: bmy_13560T0/1-301 Len: 630 Check: 2007 Weight: 1.00 Name: ENSTTRP00000016024/1-618 Len: 630 Check: 1204 Weight: 1.00 // 1 50 ENSP00000254066/1-462 ---MASNSSS CPTPGGGHLN GYPVPPYAFF FPPMLGGLSP PGALTTLQHQ ENSBTAP00000016586/1-462 ---MASNSSS CPTPGGGHLN GYPVPPYAFF FPPMLGGLSP PGALTTLQHQ BACU007033/1-462 ---MASNSSS CPTPGGGHLN GYPVPPYAFF FPPMLGGLSP PGALTTLQHQ bmy_13560T0/1-301 MYESVDVGGL TPTPNPFLVV DFYNQNRACL LPEK--GLPA PGPYSTPLRT ENSTTRP00000016024/1-618 MYESVDVGGL TPTPNPFLVV DFYNQNRACL LPEK--GLPA PGPYSTPLRT 51 100 ENSP00000254066/1-462 LPVSGYSTPS PATIETQSSS SEEIVPSPPS PPPLPRIYKP CFVCQDKSSG ENSBTAP00000016586/1-462 LPVSGYSTPS PATIETQSSS SEEIVPSPPS PPPLPRIYKP CFVCQDKSSG BACU007033/1-462 LPVSGYSTPS PATIETQSSS SEEIVPSPPS PPPLPRIYKP CFVCQDKSSG bmy_13560T0/1-301 PLWNG----S NHSIETQSSS SEEIVPSPPS PPPLPRIYKP CFVCQDKSSG ENSTTRP00000016024/1-618 PLWNG----S NHSIETQSSS SEEIVPSPPS PPPLPRIYKP CFVCQDKSSG 101 150 ENSP00000254066/1-462 YHYGVSACEG CKGFFRRSIQ KNMVYTCHRD KNCIINKVTR NRCQYCRLQK ENSBTAP00000016586/1-462 YHYGVSACEG CKGFFRRSIQ KNMVYTCHRD KNCIINKVTR NRCQYCRLQK BACU007033/1-462 YHYGVSACEG CKGFFRRSIQ KNMVYTCHRD KNCIINKVTR NRCQYCRLQK bmy_13560T0/1-301 YHYGVSACEG CK-------- ---------- -----NNSSE QRVSL----- ENSTTRP00000016024/1-618 YHYGVSACEG CKGFFRRSIQ KNMVYTCHRD KNCIINKVTR NRCQYCRLQK 151 200 ENSP00000254066/1-462 CFEVGMSKES VRNDRNKKKK EVPKPECSES YTLTPEVGEL IEKVRKAHQE ENSBTAP00000016586/1-462 CFEVGMSKES VRNDRNKKKK EVPKPECSES YTLTPEVGEL IEKVRKAHQE BACU007033/1-462 CFEVGMSKES VRNDRNKKKK EAPKPECSES YTLTPEVGEL IEKVRKAHQE bmy_13560T0/1-301 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016024/1-618 CFEVGMSKES VRNDRNKKKK EAPKPECSES YTLTPEVGEL IECAKRIRRP 201 250 ENSP00000254066/1-462 TFPALCQLGK YTTNNSSEQR VSLDIDLWDK FSELST---- KCIIKTVEFA ENSBTAP00000016586/1-462 TFPALCQLGK YTTNNSSEQR VSLDIDLWDK FSELST---- KCIIKTVEFA BACU007033/1-462 TFPALCQLGK YTTNNSSEQR VSLDIDLWDK FSELST---- KCIIKTVEFA bmy_13560T0/1-301 ---------- ---------- ---DIDLWDK FSELST---- KCIIKTVEFA ENSTTRP00000016024/1-618 SPPSASWANT LRTTAQN--- ---SVSLWTL TSGTSSVNSR KCIIKTVEFA 251 300 ENSP00000254066/1-462 KQLPGFTTLT IADQITLLKA ACLDILILRI CTRYTPEQDT MTFSDGLTLN ENSBTAP00000016586/1-462 KQLPGFTTLT IADQITLLKA ACLDILILRI CTRYTPEQDT MTFSDGLTLN BACU007033/1-462 KQLPGFTTLT IADQITLLKA ACLDILILRI CTRYTPEQDT MTFSDGLTLN bmy_13560T0/1-301 KQLPGFTTLT IADQITLLKA ACLDIL---- ---------- ---------- ENSTTRP00000016024/1-618 KQLPGFNTLT IADQITLLKA ACLDILILRI CTRYTPEQDT MTFSDGLTLN 301 350 ENSP00000254066/1-462 RTQMHNAGFG PLTDLVFAFA NQLLPLEMDD AETGLLSAIC LICGDRQDLE ENSBTAP00000016586/1-462 RTQMHNAGFG PLTDLVFAFA NQLLPLEMDD AETGLLSAIC LICGDRQDLE BACU007033/1-462 RTQMHNAGFG PLTDLVFAFA NQLLPLEMDD AETGLLSAIC LICGDRQDLE bmy_13560T0/1-301 ---------- ---------- ---------G SDSAGISA-- --SSDRQDLE ENSTTRP00000016024/1-618 RTQMHNAGFG PLTDLVFAFA NQLLPLEMDD AETGLLSAIC LICGDRQDLE 351 400 ENSP00000254066/1-462 QPDRVDMLQE PLLEALKVYV RKRRPSRPHM FPKMLMKITD LRSISAKGAE ENSBTAP00000016586/1-462 QPDRVDMLQE PLLEALKVYV RKRRPSRPHM FPKMLMKITD LRSISAKGAE BACU007033/1-462 QPDRVDMLQE PLLEALKVYV RKRRPSRPHM FPKMLMKITD LRSISAKGAE bmy_13560T0/1-301 QPDRVDMLQE PLLEALKVYV RKRRPSRPHM FPKMLMKITD LRSISAKGAE ENSTTRP00000016024/1-618 QPDRVDMLQE PLLEALKVYV RKRRPSRPHM FPKMLMKITD LRSISAKGAE 401 450 ENSP00000254066/1-462 RVITLKMEIP GSMPPLIQEM LENSEGLDTL SGQPGGGGRD GGGLAPP--- ENSBTAP00000016586/1-462 RVITLKMEIP GSMPPLIQEM LENSEGLDTL SGQAGSGGRD GGGLAPP--- BACU007033/1-462 RVITLKMEIP GSMPPLIQEM LENSEGLDTL SGPAGGGGRD GGGLAPP--- bmy_13560T0/1-301 RVITLKMEIP GSMPPLIQEM LENSEGLDTL SGQAGGGGRD GGGLAPP--- ENSTTRP00000016024/1-618 RVITLKMEIP GSMPPLIQEM LENSEGLDTL SGQAGGGGRD GGGLPRPAAA 451 500 ENSP00000254066/1-462 ---------- ---------- --------PG -------SCS PSL------- ENSBTAP00000016586/1-462 ---------- ---------- --------PG -------SCS PSL------- BACU007033/1-462 ---------- ---------- --------PG -------SCS PSL------- bmy_13560T0/1-301 ---------- ---------- --------PG -------SCS PSL------- ENSTTRP00000016024/1-618 APASAPAQTE AARPRTPRDC VDTALAPCPG FSLPFYQPCD PPALPPPVLL 501 550 ENSP00000254066/1-462 ---------- ---------- ---------- ---------- --------SP ENSBTAP00000016586/1-462 ---------- ---------- ---------- ---------- --------SP BACU007033/1-462 ---------- ---------- ---------- ---------- --------SP bmy_13560T0/1-301 ---------- ---------- ---------- ---------- --------SP ENSTTRP00000016024/1-618 PWGRREAVAT LRTEARACDG LPAPADVRAD IGQGLSEAPG PGPQDGARGP 551 600 ENSP00000254066/1-462 SSNRSSPATH SP-------- ---------- ---------- ---------- ENSBTAP00000016586/1-462 SSNRSSPATH SP-------- ---------- ---------- ---------- BACU007033/1-462 SSNRSSPATH SP-------- ---------- ---------- ---------- bmy_13560T0/1-301 SSNRSSPATQ SP-------- ---------- ---------- ---------- ENSTTRP00000016024/1-618 RVHQDTPLPT SPHLHHQQMP GPGSPILRTH KPLPPRWGAP LPRLVTEGVP 601 650 ENSP00000254066/1-462 ---------- ---------- ---------- ENSBTAP00000016586/1-462 ---------- ---------- ---------- BACU007033/1-462 ---------- ---------- ---------- bmy_13560T0/1-301 ---------- ---------- ---------- ENSTTRP00000016024/1-618 GWGTPPVHTL PYQPQVLILA GFVFILIFLF