KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:19 2014 Check: 00 .. Name: ENSBTAP00000016592/1-679 Len: 730 Check: 2622 Weight: 1.00 Name: ENSP00000344012/1-337 Len: 730 Check: 7847 Weight: 1.00 Name: ENSTTRP00000011274/1-674 Len: 730 Check: 163 Weight: 1.00 Name: BACU003350/1-451 Len: 730 Check: 427 Weight: 1.00 Name: bmy_01626T0/1-681 Len: 730 Check: 9141 Weight: 1.00 // 1 50 ENSBTAP00000016592/1-679 ---------- ---------- ---------- ---------- -MADPVAGIA ENSP00000344012/1-337 ---------- ---------- ---------- ---------- -MADPVAGIA ENSTTRP00000011274/1-674 ---------- ---------- ---------- ---------- -MADPVVGIA BACU003350/1-451 MVGPTSGQSI LKPPWVTNSS WAMLTAILTR VPAHSDSAGL GMADPVVGIA bmy_01626T0/1-681 ---------- ---------- ---------- ---------- -MADPVVGIA 51 100 ENSBTAP00000016592/1-679 GSAAKSVRPF RSSEAYVEAM KEDLAEWLNA LYGLGLPSGG DGFLTGLATG ENSP00000344012/1-337 GSAAKSVRPF RSSEAYVEAM KEDLAEWLNA LYGLGLPGGG DGFLTGLATG ENSTTRP00000011274/1-674 GSAAKSVRPF RSSEAYVEAM KEDLAEWLNA LYGLGLPSGG DGFLTGLATG BACU003350/1-451 GSAAKSVRPF RSSEAYVEAM KEDLAEWLNA LYGLGLPSGG DGFLTGLATG bmy_01626T0/1-681 GSAAKSVRPF RSSEAYVEAM KEDLAEWLNA LYGLGLPSGG DGFLTGLATG 101 150 ENSBTAP00000016592/1-679 TTLCQHANAV TEAARAMAAA RPARGVAFQA HSVVPGSFMA RDNVATFIGW ENSP00000344012/1-337 TTLCQHANAV TEAARALAAA RPARGVAFQA HSVVPGSFMA RDNVATFIGW ENSTTRP00000011274/1-674 TTLCQHANAV TEAARAMAAT RPARGVAFQA HSVAPGSFVA RDNVATFIGW BACU003350/1-451 TTLCQHANAV TEAARAMAAA RPARGVAFQA HSVAPGSFMA RDNVATFIGW bmy_01626T0/1-681 TTLCQHANAV TEAARAMAAA RPARGVAFQA HSVAPGSFMA RDNVATFIGW 151 200 ENSBTAP00000016592/1-679 CRAELGVPEV LMFETEDLVL RKNEKSVVLC LLEVARRGAR LGLLAPRLVQ ENSP00000344012/1-337 CRVELGVPEV LMFETEDLVL RKNEKSVVLC LLEVARRGAR LGLLAPRLVQ ENSTTRP00000011274/1-674 CRAELGVPEV LMFETEDLVL RKNEKSVVLC LLEVARRGAR LGLLAPRLVQ BACU003350/1-451 CRAELGVPEV LMFETEDLVL RKNEKSVVLC LLE------- ---------- bmy_01626T0/1-681 CRAELGVPEV LMFETEDLVL RKNEKSVVLC LLEVARRGAR LGLLAPRLVQ 201 250 ENSBTAP00000016592/1-679 FEQEIERELR ATPPASNTPS AGED------ -TTETTATPG APARGPRMTP ENSP00000344012/1-337 FEQEIERELR AAPPAPNAPA AGED------ -TTETAPAPG TPARGPRMTP ENSTTRP00000011274/1-674 FEQEIEQELC AAPTAPNAPS AGED------ -AAEIATAPG APSRGPRMTP BACU003350/1-451 FEQEIEQELR AAPPAPNAPS AGEDAATAAA AAAEIATSPG APARGPRMTP bmy_01626T0/1-681 FEQEIEQELR AAPPAPNAPS AGEDAATAAA AAAEIATAPG APARGPRMTP 251 300 ENSBTAP00000016592/1-679 SDLRNLDELV REILGRCTCP DQFPMIKVSE GKYRVGDSSL LIFVRVLRSH ENSP00000344012/1-337 SDLRNLDELV REILGRCTCP DQFPMIKVSE GKYRVGDSSL LIFVRVLRSH ENSTTRP00000011274/1-674 SDLRNLDELV REILGCCTCP DQFPMIKVSE GKYRVGDSSL LIFVRVLRSH BACU003350/1-451 SDLRNLDELV REILGRCTCP DQFPMIKVSE GKYRVGDSSL LIFVR----- bmy_01626T0/1-681 SDLRNLDELV REILGRCTCP DQFPMIKVSE GKYRVGDSSL LIFVRVLRSH 301 350 ENSBTAP00000016592/1-679 VMVRVGGGWD TLEHYLDKHD PCRCSSAAHR PPQPRTRTFS PQRVSPSPSP ENSP00000344012/1-337 VMVRVGGGWD TLEHYLDKHD PCRCSSTAHR PPQPRVCTFS PQRVSPTTSP ENSTTRP00000011274/1-674 VMVRVGGGWD TLEHYLDKHD PCRCSSTAHR PPQTRARTFS PQRVSPTRSP BACU003350/1-451 ---------- ---------- ---------- ---------- ---------- bmy_01626T0/1-681 VMVRVGGGWD TLEHYLDKHD PCRCSSTAHR PPQTRARTFS PQRVSPTRSP 351 400 ENSBTAP00000016592/1-679 RAGSPAPGVE RRGSRPEVTP IGLRSSKEGP ETPLRARDQL PPHPRSRRYS ENSP00000344012/1-337 RPASPVPGSE RRGSRPEMTP VSLRSTKEGP ETP------- ---------- ENSTTRP00000011274/1-674 RAGSPASGGE RRGSRPEVTP ISLRSSKEGP ETPLRARDQL PPHPRSRRYS BACU003350/1-451 ---------- ---------- ---------- ---------- ---------- bmy_01626T0/1-681 RAGSPAPGGE RRGSRPEVTP ISLRSSKEGP ETPLRVRDQL PPHPRSRRYS 401 450 ENSBTAP00000016592/1-679 GDSDSSASSA QSGPLGARSE DSGTGPRRER PSRRVTTGTP VSPRRPPAPR ENSP00000344012/1-337 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011274/1-674 GDSDSSASSA QSGPLGARSE DSGTGPRRER PSRRVTTGTP ASPRRPTAPR BACU003350/1-451 ---------- ---------- ---------- ---------- ---------- bmy_01626T0/1-681 GDSDSSASSA QSGPPGARSE DSSTGPRRER PSRRVTTGTP ASPRRPPAPR 451 500 ENSBTAP00000016592/1-679 SQSRDRLDRG RPRGAPGGRG GQLSAPSPAR RARSQSREEQ TVLLVRRDRD ENSP00000344012/1-337 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011274/1-674 SQSRDRLDRG RPRGAPGGRG GQLLGPSPAR RARSQSREEQ AVLLVRRDRD BACU003350/1-451 ---------- ---------- ---------- ---------- ---------- bmy_01626T0/1-681 SQSRDRLDRG RPRGAPGGRG GQLLGPSPAR RARSQSREEQ AVLLVRRDRD 501 550 ENSBTAP00000016592/1-679 GQHSWVPRGR GSGGSGRSSP HTPRAHSPAA ---PRVPSPS PELSTIPASV ENSP00000344012/1-337 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011274/1-674 GQHSWMPR-- -----GRSSP QTPRAHSPAA PRPPRVPSPS PELSTTPASV BACU003350/1-451 ---------- ---------- ---------- ---------- ---------- bmy_01626T0/1-681 GQHSWMPR-- -----GRSRP QTPRAHSPAA PRPPRVPSSS PELSTTPASV 551 600 ENSBTAP00000016592/1-679 FRTPLQLDPK QEQQLFRRLE EEFLANARAL EAAAAGGTPS GPAPDPIRAP ENSP00000344012/1-337 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011274/1-674 FRTPLQLDPK EEQQLFQRLE EEFLANARAL K-AAAGGTPT GPAPDLVRAP BACU003350/1-451 ------LDPK QEQQLFRRLE EEFLANARAL E-VAAGGTPT GPAPDLVRAP bmy_01626T0/1-681 FRTPLQLDPK QEQQLFRRLE EEFLANARAL E-VAAGGTPT GPAPDLVRAP 601 650 ENSBTAP00000016592/1-679 DPPAPDSAYC SSSSSSSSLS VLGGKCGQPG DSGRMANGLP GPRGPALSSS ENSP00000344012/1-337 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011274/1-674 DPPAPDSAYC SSSSSSSSLS VLGGKCGQPA DSGRMANGLP GPRGPALSSS BACU003350/1-451 DPPAPDSAYC SSSSSSSSLS VLGGKCGQPA DSGRMPNGLP GPRGPALSSS bmy_01626T0/1-681 DPPAPDSAYC SSSSSSSSLS VLGGKCGQPA DSGRMPNGLP GPRGPALSSS 651 700 ENSBTAP00000016592/1-679 SDEGSPCPGV GGPPDAPGSP LAGPEPLRTW ARGRMDTQPD RKPSRIPTPR ENSP00000344012/1-337 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011274/1-674 SDEGNPCPGV GGPPDAPGSP MAGPEPLRTW ARGRMDTQPD RKPSRIPTPR BACU003350/1-451 SDEGNPCPGV GGPPDVPGSP MAGPEPLRTW ARGRMDTQPD RKPSRIPTPR bmy_01626T0/1-681 SDEGNPCPGV GGPPDAPGSP MAGPEPLRTW ARGRMDTQPD RKPSRIPTPR 701 750 ENSBTAP00000016592/1-679 GPRRPPGPTG SRTWHALRSV SPKTEPDSWM ENSP00000344012/1-337 -PR------- ---------- ---------- ENSTTRP00000011274/1-674 GPRRPSGPTE SRAWHALQSV SPRAEPDSWM BACU003350/1-451 GPRRPSGPTE TRAWHALHSV SPRAEPDSWM bmy_01626T0/1-681 GPRRPSGPTE TRAWHALHSV SPRAEPDSWM