KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:59:23 2014 Check: 00 .. Name: ENSP00000308315/1-661 Len: 665 Check: 1409 Weight: 1.00 Name: ENSBTAP00000016614/1-661 Len: 665 Check: 1215 Weight: 1.00 Name: ENSTTRP00000007437/1-655 Len: 665 Check: 7628 Weight: 1.00 Name: bmy_15167T0/1-663 Len: 665 Check: 6736 Weight: 1.00 Name: BACU000257/1-614 Len: 665 Check: 9215 Weight: 1.00 // 1 50 ENSP00000308315/1-661 MEGARARGAQ LRLGERVRPV -GRRSAP-GR SRFRQPWRPG ASDSAPPAGT ENSBTAP00000016614/1-661 MEGAHARGAQ PRLGKKLRPV AGQRSAPRTR GQLSQPRSLG ESELTPPAGT ENSTTRP00000007437/1-655 MEGVRASGAQ PRLGERGRPA -GRGAAR-GR SRLGQPWRPG GSDLTPPAGT bmy_15167T0/1-663 MRAALTFPIR SGRCRRIRTL -RLRGIT-ER RRVTQTERLP YDFGLAGEGT BACU000257/1-614 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000308315/1-661 MAQSRVLLLL LLLPPQLHLG PVLAVRAPGF GRSGGHSLSP EENEFAEEEP ENSBTAP00000016614/1-661 MAQGWALLLL LLLPRQL--G VVLAVRAPGF GRSGARSLSP EENEFSEEEP ENSTTRP00000007437/1-655 MARSGALLLL LLLPLQLQLG PGLAVRAPVF GRSGAPSLSP EENEFVEEEP bmy_15167T0/1-663 MARSRALLLL LLLPLQLQLG PGLAVRAPVS GRSGAHSLSP EENEFVEEEP BACU000257/1-614 MARSRALLLL LLLPLQLQLG PGLAVRAPVS GRSGAHSLSP EENEFVEEEP 101 150 ENSP00000308315/1-661 VLVLSPEEPG PGPAAVSCPR DCACSQEGVV DCGGIDLREF PGDLPEHTNH ENSBTAP00000016614/1-661 VLVLSPEEPG RGPATIGCPR DCACSQEGVV DCGGIDLREF PGDLPEHTNH ENSTTRP00000007437/1-655 VLVLSPEEPG RGPPTIDCPR DCACSQEGVV DCGGIDLREF PGDLPEHTNH bmy_15167T0/1-663 VLVLSPEEPG RGPPTIDCPR DCACSQEGVV DCGGIDLREF PGDLPEHTNH BACU000257/1-614 VLVLSPEEPG RGPPTIDCPR DCACSQEGVV DCGGIDLREF PGDLPEHTNH 151 200 ENSP00000308315/1-661 LSLQNNQLEK IYPEELSRLH RLETLNLQNN RLTSRGLPEK AFEHLTNLNY ENSBTAP00000016614/1-661 LSLQNNQLEK IYPRELSRLH RLETLNLQNN RLTSRGLPEE AFEHLTNLNY ENSTTRP00000007437/1-655 LSLQNNQLEK IYPRELSRLN RLETLNLQNN RLTSRGLPEE AFEHLINLNY bmy_15167T0/1-663 LSLQNNQLEK IYPRELSRLN RLETLNLQNN RLTSRGLPEE AFEHLTNLNY BACU000257/1-614 LSLQNNQLEK IYPRELSRLN RLETLNLQNN RLTSRGLPEE AFEHLTNLNY 201 250 ENSP00000308315/1-661 LYLANNKLTL APRFLPNALI SVDFAANYLT KIYGLTFGQK PNLRSVYLHN ENSBTAP00000016614/1-661 LYLANNKLTL APRFLPNALI SVDFAANYLT KIYGLTFGQK PNLRSVYLHN ENSTTRP00000007437/1-655 LYLANNKLTL APRFLPNALI SVDFAANYLT KIYGLTFGQK PNLRSVYLHN bmy_15167T0/1-663 LYLANNKLTL APRFLPNALI SVDFAANYLT KIYGLTFGQK PNLRSVYLHN BACU000257/1-614 LYLANNKLTL APRFLPNALI SVDFAANYLT KIYGLTFGQK PNLRSVYLHN 251 300 ENSP00000308315/1-661 NKLADAGLPD NMFNGSSNVE VLILSSNFLR HVPKHLPPAL YKLHLKNNKL ENSBTAP00000016614/1-661 NKLADAGLPD NMFNGSSNVE ILILSSNFLR HVPKHLPPAL YKLHLKNNKL ENSTTRP00000007437/1-655 NKLADAGLPD NMFNGSSNVE ILILSSNFLR HVPKHLPPAL YKLHLKNNRL bmy_15167T0/1-663 NKLADAGLPD NMFNGSSNVE ILILSSNFLR HVPKHLPPAL YKLHLKNNKL BACU000257/1-614 NKLADAGLPD NMFNGSSNVE ILILSSNFLR HVPKHLPPAL YKLHLKNNKL 301 350 ENSP00000308315/1-661 EKIPPGAFSE LSSLRELYLQ NNYLTDEGLD NETFWKLSSL EYLDLSSNNL ENSBTAP00000016614/1-661 EKIPPGAFSE LSNLRELYLQ NNHLTDEGLD NETFWKLSSL EYLDLSSNNL ENSTTRP00000007437/1-655 EKIPPGAFSE LSNLRELYLQ NNYLTDEGLD NETFWKLSSL EYLDLSSNNL bmy_15167T0/1-663 EKIPPGAFSE LSNLRELYLQ NNYLTDKGLD NETFWKLSSL EYLDLSSNNL BACU000257/1-614 EKIPPGAFSE LSNLRELYLQ NNYLTDKGLD NETFWKLSSL EYLDLSSNNL 351 400 ENSP00000308315/1-661 SRVPAGLPRS LVLLHLEKNA IRSVDANVLT PIRSLEYLLL HSNQLREQGI ENSBTAP00000016614/1-661 SRVPAGLPRS LVLLHLEKNA IRSVDADVLT PIRSLEYLLL HSNQLRAQGI ENSTTRP00000007437/1-655 SRVPAGLPRS LVLLHLEKNA IRSVDADVLT PIRSLEYLLL HSNQLRAQGI bmy_15167T0/1-663 SRVPAGLPRS LVLLHLEKNA IRSVDADVLT PIRSLEYLLL HSNQLRAQGI BACU000257/1-614 SRVPAGLPRS LVLLHLEKNA IRSVDADVLT PIRSLEYLLL HSNQLRAQGI 401 450 ENSP00000308315/1-661 HPLAFQGLKR LHTVHLYNNA LERVPSGLPR RVRTLMILHN QITGIGREDF ENSBTAP00000016614/1-661 HPRAFQGLKR LHTVHLYNNA LERVPSGLPR RVRTLMILHN QITGVGRDDF ENSTTRP00000007437/1-655 HPRAFQGLKR LHTVHLYNNA LERVPSGLPR RVRTLMILHN QITGIGRDDF bmy_15167T0/1-663 HPRAFQGLKR LHTVHLYNNA LERVPSGLPR RVRTLMILHN QITGIGREDF BACU000257/1-614 HPRAFQGLKR LHTVHLYNNA LERVPSGLPR RVRTLMILHN QITGIGRDDF 451 500 ENSP00000308315/1-661 ATTYFLEELN LSYNRITSPQ VHRDAFRKLR LLRSLDLSGN RLHTLPPGLP ENSBTAP00000016614/1-661 ATTYHLEELN LSYNRITSPR VHRDAFRKLR LLRSLDLSGN RLHTLPPGLP ENSTTRP00000007437/1-655 ATTYFLEELN LSYNRITSPQ VHRDAFRKLR LLRSLDLSGN RLRTLPPGLP bmy_15167T0/1-663 ATTYFLEELN LSYNRITSPK VHRDAFRKLR LLRSLDLSGN RLRTLPPGLP BACU000257/1-614 ATTYFLEELN LSYNRITSPK VHRDAFRKLR LLRSLDLSGN RLRTLPPGLP 501 550 ENSP00000308315/1-661 RNVHVLKVKR NELAALARGA LVGMAQLREL YLTSNRLRSR ALGPRAWVDL ENSBTAP00000016614/1-661 RNVHVLKIKR NELVALARGA LAGMAQLREL YLTGNRLRNR ALGPRAWTDL ENSTTRP00000007437/1-655 RNVHVLKIKR NELAALARGA LAGMAQLREL YLTGNRLRSR ALAPRAWADL bmy_15167T0/1-663 RNVHVLKIKR NELAALARGA LAGMAQLREL YLTGNRLRSR ALAPRAWADL BACU000257/1-614 RNVHVLKIKR NELAALARGA LAGMAQLREL YLTGNRLRSR ALAPRAWADL 551 600 ENSP00000308315/1-661 AHLQLLDIAG NQLTEIPEGL PESLEYLYLQ NNKISAVPAN AFDSTPNLKG ENSBTAP00000016614/1-661 SGLQLLDIAG NQLTEIPGGL PESLEYLYLQ NNKISAVPAN AFDSTPNLKG ENSTTRP00000007437/1-655 AGLQLLDIAG NQLTDIPERL PKSLEYLYLQ NNKISTVPAN AFDSTPNLKG bmy_15167T0/1-663 AGLQLLDIAG NQLTDIPERL PKSLEYLYLQ NNKISTVPAN AFDSTPNLKG BACU000257/1-614 AGLQLLDIAG NQLTDIPERL PESLEYLYLQ NNKISTVPAN AFDSTPNLKG 601 650 ENSP00000308315/1-661 IFLRFNKLAV GSVVDSAFRR LKHLQVLDIE GNLEFGDISK DRGRLGKE-- ENSBTAP00000016614/1-661 IFLRFNKLAV GSVVESAFRK LKHLQVLDIE GNFEFGDVSK DRGRLEKE-- ENSTTRP00000007437/1-655 IFLRFNKLAV GSVVESAFRR LKHLQVLDIE GNHEYGDVSK DRGRLEEK-- bmy_15167T0/1-663 IFLRFNKLAV GSVVESAFRK LKHLQVLDIE GNHEYGDVSK DRGRLEEEKE BACU000257/1-614 IFLRFNKLAV GSVVESAFRR LKHLQVLDIE GNHEYGDVSK DRGRLEEE-E 651 700 ENSP00000308315/1-661 KEEEEEEEEE EEETR ENSBTAP00000016614/1-661 EEEEDDDEEE EEERR ENSTTRP00000007437/1-655 ------EQEE DEERW bmy_15167T0/1-663 EEEKDEEDEE EEERW BACU000257/1-614 EEEKDEEDEE EEERW